Conservation of cofitness between PS417_27425 and PS417_22895 in Pseudomonas simiae WCS417

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_27425 exopolyphosphatase 1.0 PS417_22895 tyrosine recombinase XerD 0.39 10
Pseudomonas fluorescens SBW25 0.99 PFLU_RS29090 exopolyphosphatase 0.99 PFLU_RS24560 site-specific tyrosine recombinase XerD low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS29090 exopolyphosphatase 0.99 PFLU_RS24560 site-specific tyrosine recombinase XerD low > 109
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_4454 Exopolyphosphatase (EC 3.6.1.11) 0.96 Pf6N2E2_3145 Tyrosine recombinase XerD — —
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_12900 exopolyphosphatase 0.97 AO356_06385 recombinase XerD low > 104
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_2209 Exopolyphosphatase (EC 3.6.1.11) 0.97 Pf1N1B4_3011 Tyrosine recombinase XerD low > 87
Pseudomonas sp. RS175 0.94 PFR28_04344 Exopolyphosphatase 0.95 PFR28_00331 Tyrosine recombinase XerD low > 88
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_875 Exopolyphosphatase (EC 3.6.1.11) 0.97 PfGW456L13_1721 Tyrosine recombinase XerD low > 87
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_08880 exopolyphosphatase 0.97 AO353_04365 recombinase XerD low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_0294 Exopolyphosphatase 0.93 Psyr_1286 tyrosine recombinase XerD subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_0294 Exopolyphosphatase 0.93 Psyr_1286 tyrosine recombinase XerD subunit low > 86
Pseudomonas putida KT2440 0.88 PP_5216 exopolyphosphatase 0.90 PP_1468 Tyrosine recombinase XerD low > 96
Pseudomonas sp. S08-1 0.81 OH686_11275 Exopolyphosphatase 0.84 OH686_17750 tyrosine recombinase XerD low > 80
Pseudomonas stutzeri RCH2 0.75 Psest_3731 exopolyphosphatase 0.82 Psest_3129 tyrosine recombinase XerD low > 67
Marinobacter adhaerens HP15 0.46 HP15_228 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 0.60 HP15_762 site-specific tyrosine recombinase XerD low > 73
Dechlorosoma suillum PS 0.40 Dsui_2813 exopolyphosphatase 0.54 Dsui_1217 tyrosine recombinase XerD low > 51
Acinetobacter radioresistens SK82 0.39 MPMX26_00569 Exopolyphosphatase 0.50 MPMX26_00169 Tyrosine recombinase XerD — —
Lysobacter sp. OAE881 0.39 ABIE51_RS14235 exopolyphosphatase 0.56 ABIE51_RS04495 site-specific tyrosine recombinase XerD low > 62
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS00705 Ppx/GppA phosphatase family protein 0.46 ABZR86_RS19225 site-specific tyrosine recombinase XerD low > 74
Dickeya dianthicola ME23 0.39 DZA65_RS16050 exopolyphosphatase 0.57 DZA65_RS03485 site-specific tyrosine recombinase XerD — —
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.4065.1 Exopolyphosphatase (EC 3.6.1.11) 0.49 Xcc-8004.4441.1 Tyrosine recombinase XerD low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15230 exopolyphosphatase 0.57 HGI48_RS03440 site-specific tyrosine recombinase XerD low > 71
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_03775 ppx exopolyphosphatase 0.45 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD low > 52
Rhodanobacter denitrificans MT42 0.38 LRK55_RS14730 Ppx/GppA phosphatase family protein 0.45 LRK55_RS04515 site-specific tyrosine recombinase XerD low > 63
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS15015 Ppx/GppA family phosphatase 0.45 LRK54_RS04735 site-specific tyrosine recombinase XerD low > 59
Alteromonas macleodii MIT1002 0.38 MIT1002_00871 Exopolyphosphatase 0.54 MIT1002_00786 Tyrosine recombinase XerD low > 70
Dickeya dadantii 3937 0.38 DDA3937_RS15155 exopolyphosphatase 0.58 DDA3937_RS03300 site-specific tyrosine recombinase XerD low > 74
Rahnella sp. WP5 0.37 EX31_RS22675 exopolyphosphatase 0.56 EX31_RS13480 site-specific tyrosine recombinase XerD low > 89
Enterobacter sp. TBS_079 0.37 MPMX20_03357 Exopolyphosphatase 0.56 MPMX20_03753 Tyrosine recombinase XerD 0.31 7
Enterobacter asburiae PDN3 0.37 EX28DRAFT_0165 exopolyphosphatase 0.56 EX28DRAFT_2945 tyrosine recombinase XerD low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF2166 Exopolyphosphatase (EC 3.6.1.11) 0.57 GFF2991 Tyrosine recombinase XerD low > 78
Pectobacterium carotovorum WPP14 0.37 HER17_RS06420 exopolyphosphatase 0.57 HER17_RS17890 site-specific tyrosine recombinase XerD low > 75
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_03775 exopolyphosphatase 0.59 CSW01_12250 site-specific tyrosine recombinase XerD low > 62
Klebsiella michiganensis M5al 0.36 BWI76_RS21000 exopolyphosphatase 0.57 BWI76_RS23815 site-specific tyrosine recombinase XerD — —
Escherichia coli BW25113 0.36 b2502 ppx exopolyphosphatase (NCBI) 0.57 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) low > 76
Escherichia coli ECRC99 0.36 KEDOAH_06425 ppx exopolyphosphatase 0.57 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD — —
Escherichia coli ECRC101 0.36 OKFHMN_21795 ppx exopolyphosphatase 0.57 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD — —
Escherichia coli ECOR27 0.36 NOLOHH_13445 ppx exopolyphosphatase 0.57 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD — —
Serratia liquefaciens MT49 0.36 IAI46_18920 exopolyphosphatase 0.58 IAI46_20730 site-specific tyrosine recombinase XerD low > 86
Escherichia coli ECRC62 0.36 BNILDI_12255 ppx exopolyphosphatase 0.57 BNILDI_10025 xerD site-specific tyrosine recombinase XerD — —
Escherichia coli ECRC98 0.36 JDDGAC_25740 ppx exopolyphosphatase 0.57 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD — —
Escherichia coli ECRC102 0.36 NIAGMN_19565 ppx exopolyphosphatase 0.57 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD — —
Escherichia coli BL21 0.36 ECD_02394 exopolyphosphatase 0.57 ECD_02726 site-specific tyrosine recombinase low > 60
Escherichia coli ECRC101 0.36 MCAODC_12325 ppx exopolyphosphatase 0.57 MCAODC_10090 xerD site-specific tyrosine recombinase XerD — —
Escherichia coli ECOR38 0.36 HEPCGN_20960 ppx exopolyphosphatase 0.57 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD low > 85
Escherichia coli Nissle 1917 0.36 ECOLIN_RS14205 exopolyphosphatase 0.57 ECOLIN_RS16125 site-specific tyrosine recombinase XerD low > 52
Escherichia fergusonii Becca 0.36 EFB2_01396 Exopolyphosphatase 0.57 EFB2_01007 Tyrosine recombinase XerD low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_01224 Exopolyphosphatase 0.57 OHPLBJKB_00821 Tyrosine recombinase XerD low > 73
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS02110 exopolyphosphatase 0.49 RALBFv3_RS05140 site-specific tyrosine recombinase XerD low > 76
Ralstonia solanacearum GMI1000 0.36 RS_RS07710 exopolyphosphatase 0.50 RS_RS12755 tyrosine recombinase XerD — —
Ralstonia solanacearum UW163 0.36 UW163_RS15420 exopolyphosphatase 0.49 UW163_RS08485 site-specific tyrosine recombinase XerD — —
Ralstonia solanacearum PSI07 0.36 RPSI07_RS15335 exopolyphosphatase 0.50 RPSI07_RS12160 site-specific tyrosine recombinase XerD low > 81
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS04855 exopolyphosphatase 0.52 QEN71_RS02755 site-specific tyrosine recombinase XerD — —
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS14060 exopolyphosphatase 0.47 ABZR87_RS00795 site-specific tyrosine recombinase XerD low > 80
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS13430 exopolyphosphatase 0.48 RR42_RS03345 recombinase XerD low > 128
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_2313 Exopolyphosphatase 0.61 B158DRAFT_2265 tyrosine recombinase XerD low > 40
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04419 Ppx/GppA phosphatase 0.55 H281DRAFT_04126 integrase/recombinase XerD — —
Pantoea sp. MT58 0.35 IAI47_05150 exopolyphosphatase 0.57 IAI47_03820 site-specific tyrosine recombinase XerD low > 76
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS14105 exopolyphosphatase 0.54 BPHYT_RS15950 tyrosine recombinase XerD 0.55 96
Shewanella oneidensis MR-1 0.34 SO2185 ppx exopolyphosphatase (NCBI ptt file) 0.61 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) low > 76
Erwinia tracheiphila SCR3 0.34 LU632_RS08255 ppx exopolyphosphatase 0.56 LU632_RS05975 xerD site-specific tyrosine recombinase XerD — —
Shewanella sp. ANA-3 0.33 Shewana3_2418 Ppx/GppA phosphatase (RefSeq) 0.61 Shewana3_3331 tyrosine recombinase XerD (RefSeq) low > 73
Castellaniella sp019104865 MT123 0.33 ABCV34_RS15575 Ppx/GppA phosphatase family protein 0.51 ABCV34_RS00515 site-specific tyrosine recombinase XerD low > 48
Acidovorax sp. GW101-3H11 0.32 Ac3H11_455 Exopolyphosphatase (EC 3.6.1.11) 0.52 Ac3H11_302 Tyrosine recombinase XerD — —
Shewanella amazonensis SB2B 0.32 Sama_2012 guanosine-5'-triphosphate,3'-diphosphate diphosphatase (RefSeq) 0.55 Sama_2739 integrase/recombinase XerD (RefSeq) low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4229 Exopolyphosphatase (EC 3.6.1.11) 0.46 GFF5461 Tyrosine recombinase XerD low > 90
Shewanella loihica PV-4 0.30 Shew_3078 Ppx/GppA phosphatase (RefSeq) 0.60 Shew_0770 tyrosine recombinase XerD (RefSeq) low > 60
Variovorax sp. SCN45 0.30 GFF1091 Exopolyphosphatase (EC 3.6.1.11) 0.50 GFF2772 Site-specific tyrosine recombinase XerD low > 127
Variovorax sp. OAS795 0.29 ABID97_RS14590 Ppx/GppA phosphatase family protein 0.50 ABID97_RS20265 site-specific tyrosine recombinase XerD low > 91
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS09440 exopolyphosphatase 0.52 HSERO_RS04265 tyrosine recombinase XerD low > 78
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_0477 Exopolyphosphatase 0.34 Echvi_1809 tyrosine recombinase XerD low > 79
Synechococcus elongatus PCC 7942 0.19 Synpcc7942_1965 ppx exopolyphosphatase 0.12 Synpcc7942_B2651 xerC integrase/recombinase low > 38

Not shown: 0 genomes with orthologs for PS417_27425 only; 29 genomes with orthologs for PS417_22895 only