Conservation of cofitness between Psest_1242 and Psest_4364 in Pseudomonas stutzeri RCH2

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming 1.0 Psest_4364 16S rRNA (guanine(527)-N(7))-methyltransferase GidB 0.30 8
Pseudomonas sp. S08-1 0.93 OH686_17430 tRNA-guanine transglycosylase 0.81 OH686_12665 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_1228 tRNA-guanine transglycosylase 0.77 Psyr_5131 16S rRNA m(7)G-527 methyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_1228 tRNA-guanine transglycosylase 0.77 Psyr_5131 16S rRNA m(7)G-527 methyltransferase — —
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.75 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 87
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_15790 queuine tRNA-ribosyltransferase 0.74 AO353_10440 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Pseudomonas sp. RS175 0.92 PFR28_00277 Queuine tRNA-ribosyltransferase 0.75 PFR28_04586 Ribosomal RNA small subunit methyltransferase G low > 88
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_3006 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.75 Pf1N1B4_1935 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB — —
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3198 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.74 Pf6N2E2_4204 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 103
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_06690 queuine tRNA-ribosyltransferase 0.75 AO356_11670 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.34 29
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.70 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas simiae WCS417 0.90 PS417_23245 queuine tRNA-ribosyltransferase 0.69 PS417_28515 16S rRNA methyltransferase — —
Pseudomonas fluorescens SBW25 0.90 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.70 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas putida KT2440 0.89 PP_0833 queuine tRNA-ribosyltransferase 0.71 PP_0003 16S RNA methyltransferase low > 96
Marinobacter adhaerens HP15 0.78 HP15_1479 queuine tRNA-ribosyltransferase 0.50 HP15_3689 glucose-inhibited division protein B low > 73
Alteromonas macleodii MIT1002 0.75 MIT1002_02813 Queuine tRNA-ribosyltransferase 0.47 MIT1002_04123 Ribosomal RNA small subunit methyltransferase G low > 70
Kangiella aquimarina DSM 16071 0.74 B158DRAFT_2516 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.42 B158DRAFT_0378 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) low > 40
Serratia liquefaciens MT49 0.74 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt 0.47 IAI46_25115 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.49 GFF1717 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 78
Rahnella sp. WP5 0.73 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt 0.45 EX31_RS06135 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 89
Enterobacter sp. TBS_079 0.73 MPMX20_00997 Queuine tRNA-ribosyltransferase 0.48 MPMX20_04627 Ribosomal RNA small subunit methyltransferase G low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_2565 tRNA-guanine transglycosylase 0.48 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Klebsiella michiganensis M5al 0.73 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt 0.47 BWI76_RS00225 16S rRNA methyltransferase G — —
Shewanella sp. ANA-3 0.73 Shewana3_1435 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.42 Shewana3_0001 gidB 16S rRNA methyltransferase GidB (RefSeq) low > 73
Shewanella amazonensis SB2B 0.73 Sama_2193 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.41 Sama_3654 gidB 16S rRNA methyltransferase GidB (RefSeq) 0.47 13
Acinetobacter radioresistens SK82 0.73 MPMX26_00438 Queuine tRNA-ribosyltransferase 0.37 MPMX26_01214 Ribosomal RNA small subunit methyltransferase G low > 36
Dickeya dadantii 3937 0.73 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt 0.45 DDA3937_RS21600 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt 0.45 HGI48_RS21385 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt 0.45 DZA65_RS22365 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Shewanella oneidensis MR-1 0.72 SO3113 tgt queuine tRNA-ribosyltransferase (NCBI ptt file) 0.42 SO4757 gidB glucose-inhibited division protein B (NCBI ptt file) low > 76
Escherichia coli Nissle 1917 0.72 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt 0.49 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli BW25113 0.72 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) 0.49 b3740 gidB glucose-inhibited division protein B (NCBI) low > 76
Escherichia fergusonii Becca 0.72 EFB2_03651 Queuine tRNA-ribosyltransferase 0.49 EFB2_04893 Ribosomal RNA small subunit methyltransferase G low > 86
Escherichia coli ECRC101 0.72 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt 0.49 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase 0.49 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G low > 73
Escherichia coli BL21 0.72 ECD_00354 tRNA-guanine transglycosylase 0.49 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein low > 60
Escherichia coli ECOR38 0.72 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt 0.49 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 85
Escherichia coli ECRC98 0.72 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt 0.49 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECOR27 0.72 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt 0.49 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 57
Escherichia coli ECRC62 0.72 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 0.49 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC99 0.72 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt 0.49 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC101 0.72 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 0.49 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Shewanella loihica PV-4 0.72 Shew_2337 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.43 Shew_3855 gidB glucose-inhibited division protein B (RefSeq) low > 60
Escherichia coli ECRC102 0.72 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt 0.49 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Pectobacterium carotovorum WPP14 0.72 HER17_RS15990 tRNA guanosine(34) transglycosylase Tgt 0.45 HER17_RS21605 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_03850 tRNA guanosine(34) transglycosylase Tgt 0.44 CSW01_14050 ribosomal RNA small subunit methyltransferase G low > 62
Pantoea sp. MT58 0.71 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt 0.48 IAI47_00295 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Erwinia tracheiphila SCR3 0.70 LU632_RS18500 tgt tRNA guanosine(34) transglycosylase Tgt 0.43 LU632_RS24810 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Lysobacter sp. OAE881 0.69 ABIE51_RS15020 tRNA guanosine(34) transglycosylase Tgt 0.38 ABIE51_RS01740 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.52 11
Dechlorosoma suillum PS 0.68 Dsui_3323 tRNA-guanine transglycosylase, queuosine-34-forming 0.45 Dsui_0847 16S rRNA (guanine(527)-N(7))-methyltransferase GidB low > 51
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.2168.1 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.35 Xcc-8004.5135.1 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 74
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS09540 tRNA guanosine(34) transglycosylase Tgt 0.42 ABZR86_RS14875 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Rhodanobacter denitrificans MT42 0.65 LRK55_RS02880 tRNA guanosine(34) transglycosylase Tgt 0.42 LRK55_RS08445 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 63
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS03130 tRNA guanosine(34) transglycosylase Tgt 0.42 LRK54_RS08680 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 59
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_10000 tgt tRNA guanosine(34) transglycosylase Tgt 0.42 OKGIIK_15445 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 52
Castellaniella sp019104865 MT123 0.64 ABCV34_RS15365 tRNA guanosine(34) transglycosylase Tgt 0.31 ABCV34_RS11720 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 48
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS17400 queuine tRNA-ribosyltransferase 0.34 RR42_RS20210 16S rRNA methyltransferase low > 128
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS26640 tRNA guanosine(34) transglycosylase Tgt 0.43 QEN71_RS29340 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF2798 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.33 GFF2017 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 90
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS01280 tRNA guanosine(34) transglycosylase Tgt 0.42 ABZR87_RS04120 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS03410 queuine tRNA-ribosyltransferase 0.41 BPHYT_RS19435 16S rRNA methyltransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_04670 tRNA-guanine transglycosylase 0.40 H281DRAFT_02386 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) low > 103
Ralstonia solanacearum GMI1000 0.60 RS_RS13575 tRNA guanosine(34) transglycosylase Tgt 0.41 RS_RS16670 ribosomal RNA small subunit methyltransferase G — —
Acidovorax sp. GW101-3H11 0.60 Ac3H11_861 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.38 Ac3H11_4955 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 79
Ralstonia solanacearum UW163 0.59 UW163_RS07940 tRNA guanosine(34) transglycosylase Tgt 0.41 UW163_RS04750 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS05685 tRNA guanosine(34) transglycosylase Tgt 0.41 RALBFv3_RS08860 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Variovorax sp. SCN45 0.59 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) 0.37 GFF3337 16S rRNA (guanine(527)-N(7))-methyltransferase (EC 2.1.1.170) low > 127
Variovorax sp. OAS795 0.59 ABID97_RS01595 tRNA guanosine(34) transglycosylase Tgt 0.38 ABID97_RS02910 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 91
Ralstonia solanacearum PSI07 0.58 RPSI07_RS11615 tRNA guanosine(34) transglycosylase Tgt 0.41 RPSI07_RS08415 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 81
Magnetospirillum magneticum AMB-1 0.52 AMB_RS03090 tRNA guanosine(34) transglycosylase Tgt 0.18 AMB_RS00015 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 64
Sinorhizobium meliloti 1021 0.51 SMc01206 queuine tRNA-ribosyltransferase 0.16 SMc02799 16S rRNA methyltransferase GidB low > 103
Bosea sp. OAE506 0.50 ABIE41_RS18290 tRNA guanosine(34) transglycosylase Tgt 0.15 ABIE41_RS04690 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Agrobacterium fabrum C58 0.49 Atu1677 queuine tRNA-ribosyltransferase 0.16 Atu2830 glucose inhibited division protein — —
Rhodopseudomonas palustris CGA009 0.49 TX73_013485 tRNA guanosine(34) transglycosylase Tgt 0.15 TX73_001525 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.43 15

Not shown: 26 genomes with orthologs for Psest_1242 only; 1 genomes with orthologs for Psest_4364 only