Conservation of cofitness between GFF4297 and GFF4044 in Hydrogenophaga sp. GW460-11-11-14-LB1

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4297 FIG001341: Probable Fe(2+)-trafficking protein YggX 1.0 GFF4044 ATP-dependent protease La (EC 3.4.21.53) Type I 0.69 8
Herbaspirillum seropedicae SmR1 0.86 HSERO_RS17325 iron transporter 0.76 HSERO_RS12905 peptidase — —
Variovorax sp. SCN45 0.86 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.82 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I low > 127
Variovorax sp. OAS795 0.86 ABID97_RS15460 oxidative damage protection protein 0.83 ABID97_RS17590 endopeptidase La — —
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS15385 oxidative damage protection protein 0.76 RALBFv3_RS01340 endopeptidase La — —
Ralstonia solanacearum UW163 0.82 UW163_RS12845 oxidative damage protection protein 0.76 UW163_RS14650 endopeptidase La — —
Ralstonia solanacearum PSI07 0.81 RPSI07_RS17970 Fe(2+)-trafficking protein 0.77 RPSI07_RS16135 endopeptidase La — —
Ralstonia sp. UNC404CL21Col 0.81 ABZR87_RS11010 oxidative damage protection protein 0.77 ABZR87_RS12785 endopeptidase La low > 80
Ralstonia solanacearum GMI1000 0.81 RS_RS06190 Fe(2+)-trafficking protein 0.76 RS_RS08655 endopeptidase La — —
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_00443 Fe-S cluster biosynthesis and repair protein YggX 0.76 H281DRAFT_00898 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 — —
Cupriavidus basilensis FW507-4G11 0.79 RR42_RS13040 iron transporter 0.76 RR42_RS09030 DNA-binding protein — —
Acidovorax sp. GW101-3H11 0.79 Ac3H11_580 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.86 Ac3H11_937 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Dechlorosoma suillum PS 0.78 Dsui_1571 Fe-S cluster protector protein 0.72 Dsui_2198 ATP-dependent protease La low > 51
Paraburkholderia graminis OAS925 0.77 ABIE53_002815 Fe-S cluster biosynthesis and repair protein YggX 0.74 ABIE53_002117 ATP-dependent Lon protease low > 113
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS05615 oxidative damage protection protein 0.77 QEN71_RS21975 endopeptidase La 0.66 40
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS12990 iron transporter 0.76 BPHYT_RS09460 peptidase — —
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_02560 yggX oxidative damage protection protein 0.60 OKGIIK_08030 lon endopeptidase La low > 52
Rhodanobacter denitrificans FW104-10B01 0.61 LRK54_RS13320 oxidative damage protection protein 0.61 LRK54_RS16735 endopeptidase La low > 59
Rhodanobacter denitrificans MT42 0.61 LRK55_RS13060 oxidative damage protection protein 0.61 LRK55_RS16460 endopeptidase La low > 63
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0206 Fe-S cluster protector protein 0.65 B158DRAFT_1038 ATP-dependent protease La low > 40
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS19970 oxidative damage protection protein 0.62 ABZR86_RS07320 endopeptidase La low > 74
Alteromonas macleodii MIT1002 0.55 MIT1002_00240 putative Fe(2+)-trafficking protein 0.65 MIT1002_02757 Lon protease low > 70
Shewanella amazonensis SB2B 0.55 Sama_2491 hypothetical protein (RefSeq) 0.65 Sama_1226 endopeptidase La (RefSeq) low > 62
Shewanella oneidensis MR-1 0.55 SO3369 conserved hypothetical protein (NCBI ptt file) 0.66 SO1796 lon ATP-dependent protease La (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_1180 hypothetical protein (RefSeq) 0.65 Shewana3_2659 Lon-A peptidase (RefSeq) — —
Castellaniella sp019104865 MT123 0.54 ABCV34_RS02400 oxidative damage protection protein 0.74 ABCV34_RS05125 endopeptidase La — —
Marinobacter adhaerens HP15 0.53 HP15_3016 Ion traffic superfamily protein 0.63 HP15_2183 DNA-binding ATP-dependent protease La low > 73
Pseudomonas sp. S08-1 0.53 OH686_14545 Probable Fe(2+)-trafficking protein YggX 0.63 OH686_03635 endopeptidase La low > 80
Pseudomonas stutzeri RCH2 0.53 Psest_0144 Fe-S cluster protector protein 0.64 Psest_2285 ATP-dependent protease La low > 67
Pseudomonas simiae WCS417 0.52 PS417_01540 iron transporter 0.65 PS417_17225 DNA-binding protein — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_09835 iron transporter 0.65 AO356_01740 DNA-binding protein low > 104
Pseudomonas fluorescens SBW25 0.51 PFLU_RS01585 oxidative damage protection protein 0.65 PFLU_RS19160 endopeptidase La low > 109
Pseudomonas putida KT2440 0.51 PP_0285 Fe(2+)-trafficking protein 0.64 PP_2302 DNA-binding, ATP-dependent protease — —
Lysobacter sp. OAE881 0.51 ABIE51_RS15145 oxidative damage protection protein 0.63 ABIE51_RS14145 endopeptidase La — —
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS01585 oxidative damage protection protein 0.65 PFLU_RS19160 endopeptidase La low > 109
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_02405 Fe(2+)-trafficking protein 0.65 CSW01_09605 endopeptidase La — —
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_3847 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.65 Pf6N2E2_2216 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Shewanella loihica PV-4 0.49 Shew_1122 hypothetical protein (RefSeq) 0.66 Shew_2506 ATP-dependent protease La (RefSeq) — —
Serratia liquefaciens MT49 0.49 IAI46_21470 oxidative damage protection protein 0.65 IAI46_05020 endopeptidase La low > 86
Dickeya dadantii 3937 0.49 DDA3937_RS04895 oxidative damage protection protein 0.66 DDA3937_RS05650 endopeptidase La low > 74
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.2121.1 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.62 Xcc-8004.4046.1 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_12045 iron transporter 0.65 AO353_20185 DNA-binding protein low > 101
Dickeya dianthicola ME23 0.48 DZA65_RS05240 oxidative damage protection protein 0.66 DZA65_RS06020 endopeptidase La low > 75
Pseudomonas sp. RS175 0.48 PFR28_04924 putative Fe(2+)-trafficking protein 0.65 PFR28_01230 Lon protease low > 88
Dickeya dianthicola 67-19 0.48 HGI48_RS04905 oxidative damage protection protein 0.66 HGI48_RS05695 endopeptidase La low > 71
Pantoea sp. MT58 0.48 IAI47_03555 oxidative damage protection protein 0.65 IAI47_14645 endopeptidase La — —
Escherichia coli Nissle 1917 0.47 ECOLIN_RS16475 oxidative damage protection protein 0.65 ECOLIN_RS02635 endopeptidase La 0.66 29
Erwinia tracheiphila SCR3 0.47 LU632_RS05415 oxidative damage protection protein 0.66 LU632_RS18335 lon endopeptidase La — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_367 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.65 PfGW456L13_2554 ATP-dependent protease La (EC 3.4.21.53) Type I low > 87
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_4902 Protein of unknown function DUF495 0.65 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_4902 Protein of unknown function DUF495 0.65 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 low > 86
Escherichia fergusonii Becca 0.47 EFB2_00940 putative Fe(2+)-trafficking protein 0.65 EFB2_03618 Lon protease low > 86
Escherichia coli ECRC102 0.47 NIAGMN_16960 yggX oxidative damage protection protein 0.65 NIAGMN_06375 Lon protease — —
Escherichia coli ECRC62 0.47 BNILDI_09640 yggX oxidative damage protection protein 0.65 BNILDI_22670 lon_P403L Lon protease — —
Escherichia coli ECOR38 0.47 HEPCGN_18465 yggX oxidative damage protection protein 0.65 HEPCGN_06935 lon_P403L Lon protease low > 85
Pectobacterium carotovorum WPP14 0.47 HER17_RS16630 oxidative damage protection protein 0.66 HER17_RS15840 endopeptidase La — —
Escherichia coli ECRC99 0.47 KEDOAH_08945 yggX oxidative damage protection protein 0.65 KEDOAH_19645 Lon protease — —
Escherichia coli ECOR27 0.47 NOLOHH_11055 yggX oxidative damage protection protein 0.65 NOLOHH_01255 lon_P403L Lon protease low > 57
Enterobacter sp. TBS_079 0.47 MPMX20_03819 putative Fe(2+)-trafficking protein 0.65 MPMX20_01030 Lon protease low > 85
Escherichia coli ECRC101 0.47 MCAODC_09715 yggX oxidative damage protection protein 0.65 MCAODC_27545 Lon protease — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_00754 putative Fe(2+)-trafficking protein 0.65 OHPLBJKB_03234 Lon protease low > 73
Escherichia coli ECRC98 0.47 JDDGAC_22825 yggX oxidative damage protection protein 0.65 JDDGAC_11975 Lon protease — —
Escherichia coli ECRC101 0.47 OKFHMN_19195 yggX oxidative damage protection protein 0.65 OKFHMN_08320 Lon protease — —
Escherichia coli BW25113 0.47 b2962 yggX hypothetical protein (NCBI) 0.65 b0439 lon DNA-binding ATP-dependent protease La (NCBI) low > 76
Escherichia coli BL21 0.47 ECD_02792 oxidative damage protective factor for iron-sulfur proteins 0.65 ECD_00391 DNA-binding ATP-dependent protease La low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF3066 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.65 GFF4355 ATP-dependent protease La (EC 3.4.21.53) Type I low > 78
Klebsiella michiganensis M5al 0.46 BWI76_RS24160 Fe(2+)-trafficking protein 0.66 BWI76_RS06535 endopeptidase La — —
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_1632 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.65 Pf1N1B4_3947 ATP-dependent protease La (EC 3.4.21.53) Type I — —
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2999 Fe-S cluster protector protein 0.65 EX28DRAFT_2531 endopeptidase La low > 76
Acinetobacter radioresistens SK82 0.46 MPMX26_00184 putative Fe(2+)-trafficking protein 0.53 MPMX26_02299 Lon protease low > 36
Rahnella sp. WP5 0.46 EX31_RS02740 oxidative damage protection protein 0.65 EX31_RS22255 endopeptidase La low > 89

Not shown: 0 genomes with orthologs for GFF4297 only; 27 genomes with orthologs for GFF4044 only