Conservation of cofitness between PS417_22690 and PS417_02000 in Pseudomonas simiae WCS417

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_22690 phosphogluconate dehydratase 1.0 PS417_02000 glutamate synthase 0.44 3
Pseudomonas fluorescens SBW25 0.99 PFLU_RS24330 phosphogluconate dehydratase 0.99 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS24330 phosphogluconate dehydratase 0.99 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_03420 phosphogluconate dehydratase 0.97 AO353_12515 glutamate synthase low > 101
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_601 Phosphogluconate dehydratase (EC 4.2.1.12) 0.95 Pf1N1B4_1534 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) — —
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2898 Phosphogluconate dehydratase (EC 4.2.1.12) 0.97 Pf6N2E2_3752 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) — —
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_05220 phosphogluconate dehydratase 0.97 AO356_09375 glutamate synthase — —
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_1889 Phosphogluconate dehydratase (EC 4.2.1.12) 0.97 PfGW456L13_272 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.51 7
Pseudomonas sp. RS175 0.91 PFR28_00561 Phosphogluconate dehydratase 0.96 PFR28_05015 Glutamate synthase [NADPH] large chain 0.30 20
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_1109 6-phosphogluconate dehydratase 0.93 Psyr_0411 glutamate synthase (NADPH) large subunit 0.50 41
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_1109 6-phosphogluconate dehydratase 0.93 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas putida KT2440 0.87 PP_1010 phosphogluconate dehydratase 0.90 PP_5076 L-glutamate synthase(NADPH) alpha subunit — —
Pseudomonas sp. S08-1 0.81 OH686_02490 phosphogluconate dehydratase 0.89 OH686_10005 Glutamate synthase [NADPH] large chain low > 80
Pseudomonas stutzeri RCH2 0.79 Psest_1892 6-phosphogluconate dehydratase 0.86 Psest_3711 Glutamate synthase domain 2 low > 67
Alteromonas macleodii MIT1002 0.65 MIT1002_02405 Phosphogluconate dehydratase 0.60 MIT1002_03139 Glutamate synthase [NADPH] large chain precursor low > 70
Shewanella oneidensis MR-1 0.64 SO2487 edd 6-phosphogluconate dehydratase (NCBI ptt file) 0.57 SO1325 gltB glutamate synthase, large subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.64 Shewana3_2149 phosphogluconate dehydratase (RefSeq) 0.57 Shewana3_3050 gltB glutamate synthase subunit alpha (RefSeq) 0.44 37
Shewanella loihica PV-4 0.64 Shew_2046 phosphogluconate dehydratase (RefSeq) 0.57 Shew_1032 gltB glutamate synthase subunit alpha (RefSeq) — —
Marinobacter adhaerens HP15 0.64 HP15_2174 6-phosphogluconate dehydratase 0.72 HP15_482 glutamate synthase subunit alpha — —
Escherichia coli ECRC102 0.63 NIAGMN_01720 edd phosphogluconate dehydratase 0.59 NIAGMN_15645 gltB glutamate synthase large subunit — —
Escherichia coli ECRC99 0.63 KEDOAH_01765 edd phosphogluconate dehydratase 0.59 KEDOAH_10265 gltB glutamate synthase large subunit — —
Escherichia coli ECOR38 0.63 HEPCGN_04745 edd phosphogluconate dehydratase 0.59 HEPCGN_16760 gltB3 Glutamate synthase domain 3 low > 85
Escherichia coli BL21 0.63 ECD_01822 6-phosphogluconate dehydratase 0.59 ECD_03077 glutamate synthase, large subunit low > 60
Escherichia coli BW25113 0.63 b1851 edd phosphogluconate dehydratase (NCBI) 0.59 b3212 gltB glutamate synthase, large subunit (NCBI) low > 76
Escherichia coli ECRC98 0.63 JDDGAC_00915 edd phosphogluconate dehydratase 0.59 JDDGAC_21510 gltB glutamate synthase large subunit — —
Escherichia coli ECRC62 0.63 BNILDI_15645 edd phosphogluconate dehydratase 0.59 BNILDI_01850 gltB glutamate synthase large subunit — —
Escherichia coli Nissle 1917 0.63 ECOLIN_RS10310 phosphogluconate dehydratase 0.59 ECOLIN_RS18475 glutamate synthase large subunit — —
Escherichia fergusonii Becca 0.63 EFB2_02092 Phosphogluconate dehydratase 0.59 EFB2_00611 Glutamate synthase [NADPH] large chain low > 86
Escherichia coli ECOR27 0.63 NOLOHH_16850 edd phosphogluconate dehydratase 0.59 NOLOHH_09685 gltB glutamate synthase large subunit low > 57
Escherichia coli ECRC101 0.63 OKFHMN_26340 edd phosphogluconate dehydratase 0.59 OKFHMN_17885 gltB glutamate synthase large subunit — —
Escherichia coli ECRC101 0.63 MCAODC_19065 edd phosphogluconate dehydratase 0.59 MCAODC_08405 gltB glutamate synthase large subunit — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_01878 Phosphogluconate dehydratase 0.59 OHPLBJKB_00488 Glutamate synthase [NADPH] large chain low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF1630 Phosphogluconate dehydratase (EC 4.2.1.12) 0.59 GFF2956 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 78
Shewanella amazonensis SB2B 0.63 Sama_1810 phosphogluconate dehydratase (RefSeq) 0.58 Sama_0857 gltB glutamate synthase subunit alpha (RefSeq) — —
Klebsiella michiganensis M5al 0.63 BWI76_RS18100 phosphogluconate dehydratase 0.59 BWI76_RS25315 glutamate synthase large subunit low > 92
Rahnella sp. WP5 0.63 EX31_RS16630 phosphogluconate dehydratase 0.60 EX31_RS12515 glutamate synthase large subunit low > 89
Enterobacter asburiae PDN3 0.63 EX28DRAFT_0705 6-phosphogluconate dehydratase (EC 4.2.1.12) 0.60 EX28DRAFT_3275 Glutamate synthase domain 2 low > 76
Serratia liquefaciens MT49 0.63 IAI46_23175 phosphogluconate dehydratase 0.60 IAI46_22345 glutamate synthase large subunit low > 86
Enterobacter sp. TBS_079 0.62 MPMX20_02756 Phosphogluconate dehydratase 0.60 MPMX20_04126 Glutamate synthase [NADPH] large chain low > 85
Ralstonia solanacearum PSI07 0.62 RPSI07_RS07320 phosphogluconate dehydratase 0.38 RPSI07_RS10320 glutamate synthase subunit alpha low > 81
Ralstonia solanacearum GMI1000 0.62 RS_RS24620 phosphogluconate dehydratase 0.38 RS_RS14860 glutamate synthase subunit alpha low > 80
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS22920 phosphogluconate dehydratase 0.38 ABZR87_RS02570 glutamate synthase-related protein low > 80
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS16385 phosphogluconate dehydratase 0.38 RALBFv3_RS06915 glutamate synthase subunit alpha 0.58 13
Ralstonia solanacearum UW163 0.61 UW163_RS17125 phosphogluconate dehydratase 0.38 UW163_RS06700 glutamate synthase subunit alpha — —
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS16735 phosphogluconate dehydratase 0.38 BPHYT_RS17855 glutamate synthase 0.59 19
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_04278 6-phosphogluconate dehydratase 0.38 H281DRAFT_05620 glutamate synthase (NADH) large subunit low > 103
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS26920 phosphogluconate dehydratase 0.38 QEN71_RS28010 glutamate synthase-related protein 0.55 68
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS37440 phosphogluconate dehydratase 0.38 RR42_RS18990 glutamate synthase low > 128
Rhizobium sp. OAE497 0.61 ABIE40_RS03190 phosphogluconate dehydratase 0.40 ABIE40_RS16275 glutamate synthase large subunit — —
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS05520 phosphogluconate dehydratase 0.39 HSERO_RS19595 glutamate synthase — —
Agrobacterium fabrum C58 0.60 Atu0598 phosphogluconate dehydratase 0.40 Atu3784 glutamate synthase large subunit 0.58 7
Caulobacter crescentus NA1000 0.59 CCNA_02134 phosphogluconate dehydratase 0.37 CCNA_03722 glutamate synthase (NADPH) large chain GltB 0.86 17
Caulobacter crescentus NA1000 Δfur 0.59 CCNA_02134 phosphogluconate dehydratase 0.37 CCNA_03722 glutamate synthase (NADPH) large chain GltB low > 67
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_14370 edd phosphogluconate dehydratase 0.38 OKGIIK_15200 Glutamate synthase subunit alpha — —
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS14690 phosphogluconate dehydratase 0.55 ABZR86_RS16795 glutamate synthase large subunit 0.71 17
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS07880 phosphogluconate dehydratase 0.54 LRK54_RS10960 glutamate synthase large subunit — —
Rhodanobacter denitrificans MT42 0.59 LRK55_RS07610 phosphogluconate dehydratase 0.54 LRK55_RS10665 glutamate synthase large subunit — —
Sinorhizobium meliloti 1021 0.58 SMc03068 phosphogluconate dehydratase 0.40 SMc04028 glutamate synthase 0.65 9
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF5495 Phosphogluconate dehydratase (EC 4.2.1.12) 0.38 GFF1327 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) — —
Phaeobacter inhibens DSM 17395 0.58 PGA1_c28000 phosphogluconate dehydratase Edd 0.39 PGA1_c36100 glutamate synthase [NADPH] large chain — —
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.2447.1 Phosphogluconate dehydratase (EC 4.2.1.12) 0.56 Xcc-8004.44.1 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.48 49
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS10735 phosphogluconate dehydratase 0.36 A4249_RS16105 glutamate synthase large subunit low > 48
Azospirillum sp. SherDot2 0.57 MPMX19_05118 Phosphogluconate dehydratase 0.41 MPMX19_02657 Glutamate synthase [NADPH] large chain — —
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_0354 6-phosphogluconate dehydratase (EC 4.2.1.12) 0.40 Ga0059261_1800 Glutamate synthase domain 2 0.82 2
Dinoroseobacter shibae DFL-12 0.55 Dshi_1769 6-phosphogluconate dehydratase (RefSeq) 0.38 Dshi_0002 Glutamate synthase (ferredoxin) (RefSeq) low > 64
Variovorax sp. OAS795 0.55 ABID97_RS21300 phosphogluconate dehydratase 0.39 ABID97_RS23225 glutamate synthase-related protein low > 91
Acidovorax sp. GW101-3H11 0.55 Ac3H11_2082 Phosphogluconate dehydratase (EC 4.2.1.12) 0.39 Ac3H11_4710 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) — —
Variovorax sp. SCN45 0.54 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) 0.39 GFF5332 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 127
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_01480 phosphogluconate dehydratase 0.61 CSW01_12030 glutamate synthase large subunit low > 62

Not shown: 2 genomes with orthologs for PS417_22690 only; 24 genomes with orthologs for PS417_02000 only