| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_3794 | | Transcriptional regulators | 1.0 | Psest_3932 | | nitrogen regulation protein NR(I) | 0.28 | 10 |
| Pseudomonas syringae pv. syringae B728a | 0.93 | Psyr_0234 | | transcriptional regulator, AsnC family | 0.88 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.93 | Psyr_0234 | | transcriptional regulator, AsnC family | 0.88 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.92 | AO353_09160 | | AsnC family transcriptional regulator | 0.87 | AO353_12145 | | nitrogen regulation protein NR(I) | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.92 | Pf1N1B4_2143 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.87 | Pf1N1B4_1611 | | Nitrogen regulation protein NR(I) | 0.29 | 41 |
| Pseudomonas sp. RS175 | 0.92 | PFR28_04400 | | Leucine-responsive regulatory protein | 0.87 | PFR28_04944 | | DNA-binding transcriptional regulator NtrC | low | > 88 |
| Pseudomonas putida KT2440 | 0.92 | PP_5271 | | DNA-binding transcriptional dual regulator, leucine-binding | 0.88 | PP_5048 | | two-component system DNA-binding transcriptional dual regulator GlnL/GlnG | 0.13 | 49 |
| Pseudomonas fluorescens GW456-L13 | 0.92 | PfGW456L13_811 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.87 | PfGW456L13_347 | | Nitrogen regulation protein NR(I) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.92 | PS417_27710 | | AsnC family transcriptional regulator | 0.88 | PS417_01635 | | nitrogen regulation protein NR(I) | 0.20 | 33 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_12615 | | AsnC family transcriptional regulator | 0.87 | AO356_09730 | | nitrogen regulation protein NR(I) | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.92 | Pf6N2E2_4390 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.87 | Pf6N2E2_3826 | | Nitrogen regulation protein NR(I) | low | > 103 |
| Pseudomonas fluorescens SBW25-INTG | 0.92 | PFLU_RS29385 | | AsnC family transcriptional regulator | 0.88 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.92 | PFLU_RS29385 | | AsnC family transcriptional regulator | 0.88 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | low | > 109 |
| Pseudomonas sp. S08-1 | 0.91 | OH686_13680 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.88 | OH686_10640 | | nitrogen regulation protein NR(I) | low | > 80 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.81 | Xcc-8004.4622.1 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.47 | Xcc-8004.252.1 | | Nitrogen regulation protein NtrC | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.77 | LRK54_RS00595 | | winged helix-turn-helix transcriptional regulator | 0.45 | LRK54_RS07980 | | nitrogen regulation protein NR(I) | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.77 | OKGIIK_06660 | lrp | AsnC family transcriptional regulator | 0.43 | OKGIIK_14465 | ntrC | nitrogen regulation protein NR(I) | — | — |
| Rhodanobacter denitrificans MT42 | 0.77 | LRK55_RS00365 | | winged helix-turn-helix transcriptional regulator | 0.45 | LRK55_RS07730 | | nitrogen regulation protein NR(I) | low | > 63 |
| Burkholderia phytofirmans PsJN | 0.70 | BPHYT_RS14785 | | AsnC family transcriptional regulator | 0.54 | BPHYT_RS12935 | | chemotaxis protein CheY | 0.31 | 4 |
| Herbaspirillum seropedicae SmR1 | 0.70 | HSERO_RS08380 | | AsnC family transcriptional regulator | 0.58 | HSERO_RS15680 | | chemotaxis protein CheY | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.70 | ABIE53_003132 | | Lrp/AsnC family leucine-responsive transcriptional regulator | 0.54 | ABIE53_002804 | | two-component system nitrogen regulation response regulator GlnG | 0.21 | 29 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.70 | H281DRAFT_04288 | | transcriptional regulator, AsnC family | 0.54 | H281DRAFT_00454 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.69 | RPSI07_RS19595 | | AsnC family transcriptional regulator | 0.56 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.68 | ABZR87_RS09565 | | Lrp/AsnC ligand binding domain-containing protein | 0.56 | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.67 | RR42_RS04590 | | AsnC family transcriptional regulator | 0.56 | RR42_RS12980 | | chemotaxis protein CheY | 0.34 | 24 |
| Paraburkholderia sabiae LMG 24235 | 0.67 | QEN71_RS04195 | | Lrp/AsnC ligand binding domain-containing protein | 0.54 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | low | > 153 |
| Ralstonia solanacearum IBSBF1503 | 0.67 | RALBFv3_RS13875 | | AsnC family transcriptional regulator | 0.56 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | — | — |
| Ralstonia solanacearum UW163 | 0.67 | UW163_RS15935 | | AsnC family transcriptional regulator | 0.56 | UW163_RS13000 | | nitrogen regulation protein NR(I) | — | — |
| Ralstonia solanacearum GMI1000 | 0.65 | RS_RS04610 | | AsnC family transcriptional regulator | 0.56 | RS_RS06320 | | nitrogen regulation protein NR(I) | — | — |
| Castellaniella sp019104865 MT123 | 0.63 | ABCV34_RS10805 | | winged helix-turn-helix transcriptional regulator | 0.49 | ABCV34_RS03540 | | nitrogen regulation protein NR(I) | low | > 48 |
| Variovorax sp. OAS795 | 0.60 | ABID97_RS22380 | | winged helix-turn-helix transcriptional regulator | 0.54 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | low | > 91 |
| Variovorax sp. SCN45 | 0.60 | GFF1774 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.54 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.60 | CSW01_09530 | | leucine-responsive transcriptional regulator Lrp | 0.65 | CSW01_13865 | | nitrogen regulation protein NR(I) | — | — |
| Pantoea sp. MT58 | 0.58 | IAI47_12915 | | leucine-responsive transcriptional regulator Lrp | 0.66 | IAI47_00450 | | nitrogen regulation protein NR(I) | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.58 | LU632_RS09740 | lrp | leucine-responsive transcriptional regulator Lrp | 0.66 | LU632_RS22135 | glnG | nitrogen regulation protein NR(I) | low | > 74 |
| Escherichia coli BW25113 | 0.58 | b0889 | lrp | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | 0.66 | b3868 | glnG | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.58 | MPMX20_01551 | | Leucine-responsive regulatory protein | 0.66 | MPMX20_04597 | | DNA-binding transcriptional regulator NtrC | 0.58 | 59 |
| Escherichia fergusonii Becca | 0.58 | EFB2_03172 | | Leucine-responsive regulatory protein | 0.66 | EFB2_04748 | | DNA-binding transcriptional regulator NtrC | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_02779 | | Leucine-responsive regulatory protein | 0.66 | OHPLBJKB_04184 | | DNA-binding transcriptional regulator NtrC | low | > 73 |
| Enterobacter asburiae PDN3 | 0.58 | EX28DRAFT_2043 | | transcriptional regulator, AsnC family | 0.66 | EX28DRAFT_4350 | | nitrogen regulation protein NR(I) | low | > 76 |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_09385 | lrp | leucine-responsive transcriptional regulator Lrp | 0.66 | JDDGAC_17735 | glnG | nitrogen regulation protein NR(I) | — | — |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS09655 | | leucine-responsive regulatory protein | 0.66 | BWI76_RS00385 | | nitrogen assimilation regulatory protein | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF4893 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.66 | GFF2220 | | Nitrogen regulation protein NR(I) | low | > 78 |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_03295 | lrp | leucine-responsive transcriptional regulator Lrp | 0.66 | NIAGMN_11865 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECRC101 | 0.58 | MCAODC_24965 | lrp | leucine-responsive transcriptional regulator Lrp | 0.66 | MCAODC_04610 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli Nissle 1917 | 0.58 | ECOLIN_RS04730 | | leucine-responsive transcriptional regulator Lrp | 0.66 | ECOLIN_RS22295 | | nitrogen regulation protein NR(I) | low | > 52 |
| Escherichia coli ECRC101 | 0.58 | OKFHMN_05575 | lrp | leucine-responsive transcriptional regulator Lrp | 0.66 | OKFHMN_14110 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_22145 | lrp | leucine-responsive transcriptional regulator Lrp | 0.66 | NOLOHH_06240 | glnG | nitrogen regulation protein NR(I) | low | > 57 |
| Dickeya dianthicola ME23 | 0.58 | DZA65_RS09915 | | leucine-responsive transcriptional regulator Lrp | 0.65 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | 0.69 | 24 |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_22160 | lrp | leucine-responsive transcriptional regulator Lrp | 0.66 | KEDOAH_14040 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_22935 | lrp | leucine-responsive transcriptional regulator Lrp | 0.66 | HEPCGN_12740 | glnG | nitrogen regulation protein NR(I) | low | > 85 |
| Escherichia coli BL21 | 0.58 | ECD_00893 | | leucine-responsive global transcriptional regulator | 0.66 | ECD_03753 | | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | low | > 60 |
| Pectobacterium carotovorum WPP14 | 0.58 | HER17_RS12360 | | leucine-responsive transcriptional regulator Lrp | 0.65 | HER17_RS21440 | | nitrogen regulation protein NR(I) | low | > 75 |
| Dickeya dianthicola 67-19 | 0.58 | HGI48_RS09605 | | leucine-responsive transcriptional regulator Lrp | 0.65 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | low | > 71 |
| Dickeya dadantii 3937 | 0.58 | DDA3937_RS09590 | | leucine-responsive transcriptional regulator Lrp | 0.65 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | 0.76 | 32 |
| Escherichia coli ECRC62 | 0.58 | BNILDI_20400 | lrp | leucine-responsive transcriptional regulator Lrp | 0.66 | BNILDI_05290 | glnG | nitrogen regulation protein NR(I) | — | — |
| Serratia liquefaciens MT49 | 0.58 | IAI46_08555 | | leucine-responsive transcriptional regulator Lrp | 0.67 | IAI46_24960 | | nitrogen regulation protein NR(I) | 0.39 | 76 |
| Rahnella sp. WP5 | 0.58 | EX31_RS18530 | | leucine-responsive transcriptional regulator Lrp | 0.66 | EX31_RS15880 | | nitrogen regulation protein NR(I) | low | > 89 |
| Shewanella loihica PV-4 | 0.57 | Shew_2025 | | leucine-responsive transcriptional regulator (RefSeq) | 0.66 | Shew_3561 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.56 | Sama_1771 | | leucine-responsive transcriptional regulator (RefSeq) | 0.67 | Sama_3427 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.55 | SO2305 | lrp | leucine-responsive regulatory protein (NCBI ptt file) | 0.68 | SO4472 | ntrC | nitrogen regulation protein NR(I) (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_2049 | | leucine-responsive transcriptional regulator (RefSeq) | 0.68 | Shewana3_0258 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.54 | MIT1002_02181 | | Leucine-responsive regulatory protein | 0.64 | MIT1002_03186 | | Nitrogen regulation protein NR(I) | low | > 70 |
| Azospirillum brasilense Sp245 | 0.53 | AZOBR_RS23685 | | AsnC family transcriptional regulator | 0.40 | AZOBR_RS14430 | | chemotaxis protein CheY | low | > 97 |
| Sinorhizobium meliloti 1021 | 0.51 | SMc00681 | | leucine-responsive regulatory protein | 0.40 | SMc01043 | | nitrogen assimilation regulatory protein | low | > 103 |
| Caulobacter crescentus NA1000 Δfur | 0.50 | CCNA_00847 | | leucine-responsive regulatory protein | 0.33 | CCNA_03424 | | AAA-family response regulator tacA | low | > 67 |
| Caulobacter crescentus NA1000 | 0.50 | CCNA_00847 | | leucine-responsive regulatory protein | 0.33 | CCNA_03424 | | AAA-family response regulator tacA | low | > 66 |
| Bosea sp. OAE506 | 0.50 | ABIE41_RS07920 | | Lrp/AsnC ligand binding domain-containing protein | 0.38 | ABIE41_RS16785 | | nitrogen regulation protein NR(I) | low | > 77 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.50 | A4249_RS13055 | | Lrp/AsnC ligand binding domain-containing protein | 0.32 | A4249_RS09115 | | sigma-54 dependent transcriptional regulator | low | > 48 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF2725 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.53 | GFF5269 | | Nitrogen regulation protein NR(I) | low | > 90 |
| Azospirillum sp. SherDot2 | 0.47 | MPMX19_03947 | | Leucine-responsive regulatory protein | 0.40 | MPMX19_01112 | | DNA-binding transcriptional regulator NtrC | — | — |
| Acinetobacter radioresistens SK82 | 0.45 | MPMX26_01467 | | Leucine-responsive regulatory protein | 0.66 | MPMX26_01292 | | DNA-binding transcriptional regulator NtrC | low | > 36 |
| Marinobacter adhaerens HP15 | 0.42 | HP15_2690 | | transcriptional regulator, AsnC family | 0.74 | HP15_425 | | two-component response regulator NtrC | low | > 73 |
| Rhizobium sp. OAE497 | 0.40 | ABIE40_RS23450 | | Lrp/AsnC family transcriptional regulator | 0.39 | ABIE40_RS09090 | | nitrogen regulation protein NR(I) | low | > 107 |
| Agrobacterium fabrum C58 | 0.40 | Atu4159 | | AsnC family transcriptional regulator | 0.39 | Atu1446 | | two component response regulator | low | > 89 |
| Phaeobacter inhibens DSM 17395 | 0.36 | PGA1_c11760 | | putative proline dehydrogenase transcriptional activator | 0.30 | PGA1_c14810 | | nitrogen assimilation regulatory protein NtrX | — | — |
Not shown: 4 genomes with orthologs for Psest_3794 only; 16 genomes with orthologs for Psest_3932 only