Conservation of cofitness between PS417_00245 and PS417_19740 in Pseudomonas simiae WCS417

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_00245 oligopeptidase A 1.0 PS417_19740 flagellar biosynthesis protein flip 0.49 9
Pseudomonas fluorescens SBW25 0.99 PFLU_RS00240 oligopeptidase A 0.99 PFLU_RS21710 flagellar type III secretion system pore protein FliP low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS00240 oligopeptidase A 0.99 PFLU_RS21710 flagellar type III secretion system pore protein FliP low > 109
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.89 Pf1N1B4_3618 Flagellar biosynthesis protein FliP — —
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.93 PfGW456L13_4339 Flagellar biosynthesis protein FliP low > 87
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.88 Pf6N2E2_2580 Flagellar biosynthesis protein FliP low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_11120 oligopeptidase A 0.88 AO356_03770 flagellar biosynthesis protein flip 0.24 49
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_10775 oligopeptidase A 0.95 AO353_18745 flagellar biosynthesis protein flip low > 101
Pseudomonas sp. RS175 0.92 PFR28_04699 Oligopeptidase A 0.89 PFR28_00845 Flagellar biosynthetic protein FliP low > 88
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.86 Psyr_3444 Flagellar transport protein FliP — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.86 Psyr_3444 Flagellar transport protein FliP low > 86
Pseudomonas putida KT2440 0.90 PP_0096 oligopeptidase A 0.83 PP_4355 flagellar export apparatus subunit low > 96
Pseudomonas sp. S08-1 0.83 OH686_12360 Oligopeptidase A 0.87 OH686_02770 flagellar biosynthetic protein FliP low > 80
Pseudomonas stutzeri RCH2 0.80 Psest_4320 Zn-dependent oligopeptidases 0.83 Psest_1732 flagellar biosynthetic protein FliP low > 67
Shewanella sp. ANA-3 0.59 Shewana3_4051 oligopeptidase A (RefSeq) 0.67 Shewana3_1352 fliP flagellar biosynthesis protein FliP (RefSeq) — —
Shewanella oneidensis MR-1 0.59 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.67 SO3218 fliP flagellar biosynthetic protein FliP (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.58 Shew_3657 oligopeptidase A (RefSeq) 0.67 Shew_1376 fliP flagellar biosynthesis protein FliP (RefSeq) 0.53 23
Shewanella amazonensis SB2B 0.58 Sama_3546 oligopeptidase A (RefSeq) 0.65 Sama_2287 fliP flagellar biosynthesis protein FliP (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.58 MIT1002_03633 Oligopeptidase A 0.67 MIT1002_01095 Flagellar biosynthetic protein FliP precursor low > 70
Dickeya dadantii 3937 0.58 DDA3937_RS21265 oligopeptidase A 0.54 DDA3937_RS13415 flagellar type III secretion system pore protein FliP low > 74
Dickeya dianthicola ME23 0.57 DZA65_RS00035 oligopeptidase A 0.53 DZA65_RS13945 flagellar type III secretion system pore protein FliP low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS00045 oligopeptidase A 0.53 HGI48_RS13460 flagellar type III secretion system pore protein FliP low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.54 GFF4008 Flagellar biosynthesis protein FliP low > 78
Enterobacter asburiae PDN3 0.57 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.55 EX28DRAFT_0606 flagellar biosynthetic protein FliP low > 76
Escherichia coli BW25113 0.57 b3498 prlC oligopeptidase A (NCBI) 0.56 b1948 fliP flagellar biosynthesis protein P (NCBI) low > 76
Escherichia coli ECRC62 0.57 BNILDI_03210 prlC oligopeptidase A 0.56 BNILDI_15085 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECOR27 0.57 NOLOHH_08350 prlC oligopeptidase A 0.56 NOLOHH_16295 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00205 Oligopeptidase A 0.55 OHPLBJKB_01781 Flagellar biosynthetic protein FliP low > 73
Escherichia coli ECOR38 0.57 HEPCGN_15325 prlC oligopeptidase A 0.55 HEPCGN_04025 fliP flagellar type III secretion system pore protein FliP low > 85
Enterobacter sp. TBS_079 0.57 MPMX20_04397 Oligopeptidase A 0.55 MPMX20_02945 Flagellar biosynthetic protein FliP low > 85
Escherichia coli ECRC102 0.57 NIAGMN_14180 prlC oligopeptidase A 0.56 NIAGMN_02390 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC101 0.57 MCAODC_06930 prlC oligopeptidase A 0.56 MCAODC_19730 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC99 0.57 KEDOAH_11730 prlC oligopeptidase A 0.56 KEDOAH_02430 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC101 0.57 OKFHMN_16415 prlC oligopeptidase A 0.56 OKFHMN_25665 fliP flagellar type III secretion system pore protein FliP — —
Escherichia fergusonii Becca 0.57 EFB2_00317 Oligopeptidase A 0.55 EFB2_01998 Flagellar biosynthetic protein FliP low > 86
Escherichia coli ECRC98 0.57 JDDGAC_20045 prlC oligopeptidase A 0.56 JDDGAC_00250 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS19985 oligopeptidase A 0.55 ECOLIN_RS11110 flagellar type III secretion system pore protein FliP — —
Pantoea sp. MT58 0.56 IAI47_01345 oligopeptidase A 0.55 IAI47_07980 flagellar type III secretion system pore protein FliP low > 76
Marinobacter adhaerens HP15 0.56 HP15_3759 oligopeptidase A-like protein 0.65 HP15_2312 flagellar biosynthesis protein FliP low > 73
Erwinia tracheiphila SCR3 0.56 LU632_RS19470 prlC oligopeptidase A 0.51 LU632_RS10525 fliP flagellar type III secretion system pore protein FliP low > 74
Serratia liquefaciens MT49 0.56 IAI46_24210 oligopeptidase A 0.55 IAI46_15890 flagellar type III secretion system pore protein FliP low > 86
Pectobacterium carotovorum WPP14 0.56 HER17_RS21300 oligopeptidase A 0.49 HER17_RS08230 flagellar type III secretion system pore protein FliP low > 75
Rahnella sp. WP5 0.56 EX31_RS05165 oligopeptidase A 0.50 EX31_RS09590 flagellar type III secretion system pore protein FliP low > 89
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS14940 M3 family metallopeptidase 0.55 ABZR86_RS20230 flagellar type III secretion system pore protein FliP low > 74
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS07290 oligopeptidase A 0.52 HSERO_RS10260 flagellar biosynthesis protein FliP low > 78
Dechlorosoma suillum PS 0.48 Dsui_0046 Zn-dependent oligopeptidase 0.40 Dsui_1746 flagellar biosynthetic protein FliP low > 51
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_15380 dcp oligopeptidase A 0.47 OKGIIK_02795 fliP flagellar type III secretion system pore protein FliP low > 52
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS08615 M3 family metallopeptidase 0.49 LRK54_RS13545 flagellar type III secretion system pore protein FliP low > 59
Rhodanobacter denitrificans MT42 0.47 LRK55_RS08380 M3 family metallopeptidase 0.49 LRK55_RS13285 flagellar type III secretion system pore protein FliP low > 63
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS07340 oligopeptidase A 0.53 RR42_RS23360 flagellar biosynthesis protein flip low > 128
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS05695 M3 family metallopeptidase 0.55 QEN71_RS28845 flagellar type III secretion system pore protein FliP 0.93 13
Ralstonia solanacearum UW163 0.45 UW163_RS15000 oligopeptidase A 0.55 UW163_RS17520 flagellar biosynthetic protein FliP — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS01690 oligopeptidase A 0.55 RALBFv3_RS21665 flagellar biosynthetic protein FliP low > 76
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS13490 M3 family metallopeptidase 0.55 ABZR87_RS22210 flagellar type III secretion system pore protein FliP low > 80
Ralstonia solanacearum GMI1000 0.45 RS_RS08035 oligopeptidase A 0.55 RS_RS18960 flagellar biosynthetic protein FliP low > 80
Paraburkholderia graminis OAS925 0.45 ABIE53_002798 oligopeptidase A 0.55 ABIE53_000084 flagellar biosynthetic protein FliP low > 113
Variovorax sp. SCN45 0.45 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.54 GFF5740 Flagellar biosynthesis protein FliP — —
Ralstonia solanacearum PSI07 0.44 RPSI07_RS15795 oligopeptidase A 0.55 RPSI07_RS01460 flagellar biosynthetic protein FliP low > 81
Acidovorax sp. GW101-3H11 0.44 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.55 Ac3H11_1414 Flagellar biosynthesis protein FliP low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.55 GFF1461 Flagellar biosynthesis protein FliP low > 90
Castellaniella sp019104865 MT123 0.41 ABCV34_RS04180 M3 family metallopeptidase 0.55 ABCV34_RS05695 flagellar type III secretion system pore protein FliP — —
Sinorhizobium meliloti 1021 0.28 SMc04403 peptidyl-dipeptidase A protein 0.41 SMc03036 flagellar biosynthesis protein FliP low > 103
Agrobacterium fabrum C58 0.28 Atu2664 peptidyl-dipeptidase 0.41 Atu0546 flagellar biosynthetic protein 0.26 33
Rhizobium sp. OAE497 0.27 ABIE40_RS18135 M3 family metallopeptidase 0.41 ABIE40_RS03015 flagellar type III secretion system pore protein FliP low > 107
Rhodopseudomonas palustris CGA009 0.27 TX73_004495 M3 family metallopeptidase 0.46 TX73_020170 flagellar type III secretion system pore protein FliP low > 86
Azospirillum brasilense Sp245 0.26 AZOBR_RS23485 peptidase M3 0.44 AZOBR_RS32035 flagellar biosynthesis protein FliP — —
Phaeobacter inhibens DSM 17395 0.25 PGA1_c26590 peptidyl-dipeptidase Dcp 0.36 PGA1_c35610 flagellar biosynthetic protein FliP low > 62
Dinoroseobacter shibae DFL-12 0.23 Dshi_2973 Peptidyl-dipeptidase Dcp (RefSeq) 0.36 Dshi_3267 flagellar biosynthetic protein FliP (RefSeq) low > 64
Caulobacter crescentus NA1000 0.23 CCNA_03816 peptidyl-dipeptidase DCP 0.46 CCNA_01002 flagellar biosyntheis protein FliP low > 66
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_03816 peptidyl-dipeptidase DCP 0.46 CCNA_01002 flagellar biosyntheis protein FliP low > 67

Not shown: 22 genomes with orthologs for PS417_00245 only; 4 genomes with orthologs for PS417_19740 only