Conservation of cofitness between GFF1452 and GFF3379 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1452 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 1.0 GFF3379 FIG004453: protein YceG like 0.41 13
Escherichia fergusonii Becca 0.96 EFB2_04520 Acetyl-coenzyme A synthetase 0.85 EFB2_02878 Endolytic murein transglycosylase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.96 OHPLBJKB_03971 Acetyl-coenzyme A synthetase 0.85 OHPLBJKB_02569 Endolytic murein transglycosylase low > 73
Escherichia coli ECOR38 0.96 HEPCGN_11455 acs acetate--CoA ligase 0.85 HEPCGN_23925 yceG cell division protein YceG low > 87
Escherichia coli ECRC62 0.96 BNILDI_06445 acs acetate--CoA ligase 0.85 BNILDI_19245 yceG cell division protein YceG low > 75
Escherichia coli BL21 0.96 ECD_03941 acetyl-CoA synthetase 0.85 ECD_01093 septation protein, ampicillin sensitivity low > 61
Escherichia coli ECOR27 0.96 NOLOHH_05080 acs acetate--CoA ligase 0.85 NOLOHH_21085 yceG cell division protein YceG low > 75
Escherichia coli BW25113 0.96 b4069 acs acetyl-coenzyme A synthetase (NCBI) 0.85 b1097 yceG predicted aminodeoxychorismate lyase (NCBI) low > 76
Escherichia coli ECRC101 0.95 MCAODC_03340 acs acetate--CoA ligase 0.84 MCAODC_22915 yceG cell division protein YceG low > 87
Escherichia coli ECRC102 0.95 NIAGMN_10675 acs acetate--CoA ligase 0.84 NIAGMN_24275 yceG cell division protein YceG — —
Escherichia coli ECRC100 0.95 OKFHMN_12830 acs acetate--CoA ligase 0.84 OKFHMN_03555 yceG cell division protein YceG low > 80
Escherichia coli ECRC99 0.95 KEDOAH_15320 acs acetate--CoA ligase 0.84 KEDOAH_24200 yceG cell division protein YceG — —
Escherichia coli ECRC98 0.95 JDDGAC_16465 acs acetate--CoA ligase 0.84 JDDGAC_07215 yceG cell division protein YceG low > 86
Klebsiella michiganensis M5al 0.94 BWI76_RS02095 acetyl-coenzyme A synthetase 0.85 BWI76_RS11110 cell division protein YceG low > 92
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4232 acetate--CoA ligase 0.85 EX28DRAFT_1832 conserved hypothetical protein, YceG family low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_00291 Acetyl-coenzyme A synthetase 0.86 MPMX20_01777 Endolytic murein transglycosylase low > 85
Pantoea sp. MT58 0.86 IAI47_17715 acetate--CoA ligase 0.64 IAI47_12050 cell division protein YceG low > 76
Rahnella sp. WP5 0.86 EX31_RS09040 acetate--CoA ligase 0.58 EX31_RS24455 endolytic transglycosylase MltG low > 89
Pectobacterium carotovorum WPP14 0.85 HER17_RS17630 acetate--CoA ligase 0.61 HER17_RS08670 endolytic transglycosylase MltG low > 75
Erwinia tracheiphila SCR3 0.85 LU632_RS23305 acs acetate--CoA ligase 0.65 LU632_RS14800 yceG cell division protein YceG low > 74
Serratia liquefaciens MT49 0.85 IAI46_01405 acetate--CoA ligase 0.55 IAI46_09810 endolytic transglycosylase MltG low > 86
Dickeya dadantii 3937 0.84 DDA3937_RS03480 acetate--CoA ligase 0.57 DDA3937_RS23250 endolytic transglycosylase MltG low > 74
Dickeya dianthicola 67-19 0.84 HGI48_RS03580 acetate--CoA ligase 0.58 HGI48_RS13165 endolytic transglycosylase MltG low > 71
Dickeya dianthicola ME23 0.84 DZA65_RS03695 acetate--CoA ligase 0.57 DZA65_RS13635 endolytic transglycosylase MltG low > 75
Vibrio cholerae E7946 ATCC 55056 0.75 CSW01_01520 acetyl-coenzyme A synthetase 0.40 CSW01_10075 endolytic transglycosylase MltG low > 62
Marinobacter adhaerens HP15 0.72 HP15_811 acetyl-CoA synthetase 0.32 HP15_2208 aminodeoxychorismate lyase — —
Shewanella sp. ANA-3 0.71 Shewana3_2523 acetyl-CoA synthetase (RefSeq) 0.34 Shewana3_1765 aminodeoxychorismate lyase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.70 SO2743 acs acetyl-coenzyme A synthetase (NCBI ptt file) 0.34 SO2614 conserved hypothetical protein TIGR00247 (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.70 Sama_2079 acetyl-CoA synthetase (RefSeq) 0.35 Sama_2044 hypothetical protein (RefSeq) low > 62
Pseudomonas sp. S08-1 0.70 OH686_21250 acetate--CoA ligase 0.30 OH686_22160 Murein endolytic transglycosylase MltG low > 80
Pseudomonas sp. RS175 0.70 PFR28_03289 Acetyl-coenzyme A synthetase 0.28 PFR28_03006 Endolytic murein transglycosylase low > 88
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_18695 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) 0.28 AO356_20185 aminodeoxychorismate lyase low > 104
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_5659 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.29 Pf6N2E2_5956 FIG004453: protein YceG like low > 103
Pseudomonas simiae WCS417 0.70 PS417_21750 acetyl-CoA synthetase 0.29 PS417_21420 aminodeoxychorismate lyase low > 88
Pseudomonas fluorescens SBW25 0.69 PFLU_RS23355 acetate--CoA ligase 0.30 PFLU_RS23035 endolytic transglycosylase MltG low > 109
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS23355 acetate--CoA ligase 0.30 PFLU_RS23035 endolytic transglycosylase MltG low > 109
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_3572 acetyl-coenzyme A synthetase 0.30 Psyr_1651 Protein of unknown function DUF175 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_3572 acetyl-coenzyme A synthetase 0.30 Psyr_1651 Protein of unknown function DUF175 low > 86
Magnetospirillum magneticum AMB-1 0.69 AMB_RS21140 acetate--CoA ligase 0.27 AMB_RS10640 endolytic transglycosylase MltG low > 64
Shewanella loihica PV-4 0.69 Shew_1533 acetyl-CoA synthetase (RefSeq) 0.33 Shew_1578 aminodeoxychorismate lyase (RefSeq) — —
Azospirillum brasilense Sp245 0.67 AZOBR_RS00270 acetyl-CoA synthetase 0.29 AZOBR_RS08405 aminodeoxychorismate lyase low > 97
Alteromonas macleodii MIT1002 0.66 MIT1002_03516 Acetyl-coenzyme A synthetase 0.30 MIT1002_01737 putative aminodeoxychorismate lyase low > 70
Rhodospirillum rubrum S1H 0.66 Rru_A3575 Acetate--CoA ligase (NCBI) 0.31 Rru_A0419 Aminodeoxychorismate lyase (NCBI) low > 58
Azospirillum sp. SherDot2 0.65 MPMX19_02038 Acetyl-coenzyme A synthetase 0.30 MPMX19_00941 Endolytic murein transglycosylase low > 112
Acinetobacter radioresistens SK82 0.64 MPMX26_02906 Acetyl-coenzyme A synthetase 0.36 MPMX26_02164 Endolytic murein transglycosylase low > 36
Pseudomonas stutzeri RCH2 0.64 Psest_2657 acetate--CoA ligase 0.33 Psest_1692 conserved hypothetical protein, YceG family low > 67
Agrobacterium fabrum C58 0.63 Atu2745 acetyl-coenzyme A synthetase 0.28 Atu1099 hypothetical protein low > 89
Dinoroseobacter shibae DFL-12 0.62 Dshi_3553 acetate--CoA ligase (RefSeq) 0.23 Dshi_2179 aminodeoxychorismate lyase (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.62 A4249_RS15190 acetate--CoA ligase 0.24 A4249_RS06785 endolytic transglycosylase MltG low > 48
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_0063 acetate--CoA ligase 0.33 B158DRAFT_1749 conserved hypothetical protein, YceG family low > 40
Sphingomonas koreensis DSMZ 15582 0.61 Ga0059261_1313 acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.24 Ga0059261_0361 conserved hypothetical protein, YceG family low > 68
Caulobacter crescentus NA1000 0.61 CCNA_03696 acetyl-coenzyme A synthetase 0.24 CCNA_01751 aminodeoxychorismate lyase low > 66
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_03696 acetyl-coenzyme A synthetase 0.24 CCNA_01751 aminodeoxychorismate lyase low > 67
Phaeobacter inhibens DSM 17395 0.59 PGA1_c12950 acetyl-coenzyme A synthetase Acs 0.24 PGA1_c17880 putative aminodeoxychorismate lyase — —
Pedobacter sp. GW460-11-11-14-LB5 0.53 CA265_RS16340 acetate--CoA ligase 0.16 CA265_RS08085 aminodeoxychorismate lyase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.52 Echvi_1268 acetate--CoA ligase 0.16 Echvi_0372 conserved hypothetical protein, YceG family low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.51 ABZR88_RS15400 acetate--CoA ligase 0.15 ABZR88_RS14775 endolytic transglycosylase MltG low > 71
Castellaniella sp019104865 MT123 0.48 ABCV34_RS00680 acetate--CoA ligase 0.31 ABCV34_RS03975 endolytic transglycosylase MltG low > 48
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS13880 AMP-dependent synthetase 0.27 RR42_RS10910 aminodeoxychorismate lyase low > 128
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS14360 acetate--CoA ligase 0.32 ABZR87_RS12480 endolytic transglycosylase MltG low > 80
Ralstonia solanacearum GMI1000 0.47 RS_RS09815 acetyl-coenzyme A synthetase 0.31 RS_RS09000 endolytic transglycosylase MltG low > 80
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS07770 acetyl-CoA synthetase 0.31 HSERO_RS13025 aminodeoxychorismate lyase — —
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS07000 acetyl-CoA synthetase 0.31 BPHYT_RS09620 aminodeoxychorismate lyase low > 109
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS23765 acetate--CoA ligase 0.31 QEN71_RS21820 endolytic transglycosylase MltG low > 153
Dechlorosoma suillum PS 0.47 Dsui_2003 acetate--CoA ligase 0.31 Dsui_2656 conserved hypothetical protein, YceG family low > 51
Variovorax sp. OAS795 0.46 ABID97_RS27430 acetate--CoA ligase 0.29 ABID97_RS15980 endolytic transglycosylase MltG low > 91
Paraburkholderia graminis OAS925 0.46 ABIE53_001664 acetyl-CoA synthetase 0.31 ABIE53_002162 UPF0755 protein low > 113
Ralstonia solanacearum UW163 0.46 UW163_RS11280 acetate--CoA ligase 0.30 UW163_RS14340 endolytic transglycosylase MltG — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS02445 acetate--CoA ligase 0.30 RALBFv3_RS01030 endolytic transglycosylase MltG low > 76
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04953 acetyl-coenzyme A synthetase 0.31 H281DRAFT_00927 UPF0755 protein low > 103
Ralstonia solanacearum PSI07 0.46 RPSI07_RS14880 acetate--CoA ligase 0.29 RPSI07_RS16445 endolytic transglycosylase MltG low > 81
Acidovorax sp. GW101-3H11 0.45 Ac3H11_951 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.30 Ac3H11_2492 FIG004453: protein YceG like low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF4107 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.28 GFF4661 FIG004453: protein YceG like low > 90
Variovorax sp. SCN45 0.45 GFF475 Acetyl-CoA synthetase (EC 6.2.1.1) 0.31 GFF30 Murein endolytic transglycosylase MltG low > 127
Phocaeicola vulgatus CL09T03C04 0.15 HMPREF1058_RS08765 AMP-binding protein 0.14 HMPREF1058_RS07010 endolytic transglycosylase MltG low > 67

Not shown: 25 genomes with orthologs for GFF1452 only; 0 genomes with orthologs for GFF3379 only