| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_0311 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 1.0 | Psest_0310 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | 0.77 | 1 |
| Pseudomonas sp. S08-1 | 0.67 | OH686_16055 | | Multidrug efflux system, outer membrane factor lipoprotein | 0.84 | OH686_16050 | | Multidrug efflux system, inner membrane proton/drug antiporter (RND type) | 0.87 | 17 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.67 | Psyr_4009 | | RND efflux system, outer membrane lipoprotein, NodT | 0.77 | Psyr_4008 | | Hydrophobe/amphiphile efflux-1 HAE1 | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.67 | Psyr_4009 | | RND efflux system, outer membrane lipoprotein, NodT | 0.77 | Psyr_4008 | | Hydrophobe/amphiphile efflux-1 HAE1 | 0.90 | 1 |
| Pseudomonas sp. RS175 | 0.65 | PFR28_00630 | | putative efflux pump outer membrane protein TtgC | 0.77 | PFR28_00631 | | putative efflux pump membrane transporter TtgB | 0.88 | 1 |
| Pseudomonas putida KT2440 | 0.65 | PP_1384 | | Probable efflux pump outer membrane protein TtgC | 0.79 | PP_1385 | | Probable efflux pump membrane transporter TtgB | 0.95 | 1 |
| Pseudomonas fluorescens FW300-N1B4 | 0.64 | Pf1N1B4_3245 | | RND efflux system, outer membrane lipoprotein, NodT family | 0.78 | Pf1N1B4_3246 | | RND efflux system, inner membrane transporter CmeB | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.64 | PfGW456L13_4582 | | RND efflux system, outer membrane lipoprotein CmeC | 0.77 | PfGW456L13_4581 | | RND efflux system, inner membrane transporter CmeB | 0.84 | 1 |
| Pseudomonas fluorescens FW300-N2E3 | 0.63 | AO353_17290 | | multidrug transporter | 0.78 | AO353_17295 | | multidrug transporter | 0.90 | 1 |
| Pseudomonas fluorescens FW300-N2E2 | 0.63 | Pf6N2E2_2825 | | RND efflux system, outer membrane lipoprotein CmeC | 0.78 | Pf6N2E2_2824 | | RND efflux system, inner membrane transporter CmeB | 0.90 | 1 |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_04885 | | multidrug transporter | 0.78 | AO356_04880 | | multidrug transporter | 0.94 | 1 |
| Pseudomonas simiae WCS417 | 0.63 | PS417_06765 | | multidrug transporter | 0.75 | PS417_06770 | | multidrug transporter | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.62 | PFLU_RS06800 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.75 | PFLU_RS06805 | | efflux RND transporter permease subunit | 0.92 | 1 |
| Pseudomonas fluorescens SBW25 | 0.62 | PFLU_RS06800 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.75 | PFLU_RS06805 | | efflux RND transporter permease subunit | 0.65 | 1 |
| Herbaspirillum seropedicae SmR1 | 0.53 | HSERO_RS06820 | | multidrug transporter | 0.61 | HSERO_RS06815 | | multidrug transporter | low | > 78 |
| Dyella japonica UNC79MFTsu3.2 | 0.52 | ABZR86_RS18290 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.61 | ABZR86_RS18285 | | efflux RND transporter permease subunit | low | > 74 |
| Ralstonia solanacearum PSI07 | 0.52 | RPSI07_RS03385 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | 0.63 | RPSI07_RS03390 | | multidrug efflux RND transporter permease subunit | low | > 81 |
| Ralstonia solanacearum UW163 | 0.51 | UW163_RS19375 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | 0.62 | UW163_RS19380 | | multidrug efflux RND transporter permease subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.51 | RALBFv3_RS19800 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | 0.62 | RALBFv3_RS19795 | | multidrug efflux RND transporter permease subunit | low | > 76 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.50 | Xcc-8004.1795.1 | | RND efflux system, outer membrane lipoprotein CmeC | 0.62 | Xcc-8004.1794.1 | | RND efflux system, inner membrane transporter CmeB | low | > 74 |
| Cupriavidus basilensis FW507-4G11 | 0.50 | RR42_RS36970 | | RND transporter | 0.62 | RR42_RS32420 | | multidrug efflux RND transporter permease subunit | low | > 128 |
| Ralstonia solanacearum GMI1000 | 0.50 | RS_RS21025 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | 0.62 | RS_RS21030 | | multidrug efflux RND transporter permease subunit | low | > 80 |
| Rhodospirillum rubrum S1H | 0.49 | Rru_A2052 | | RND efflux system, outer membrane lipoprotein, NodT (NCBI) | 0.62 | Rru_A2051 | | Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) | 0.54 | 21 |
| Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS02530 | | efflux transporter outer membrane subunit | 0.64 | QEN71_RS02525 | | efflux RND transporter permease subunit | 0.97 | 1 |
| Rahnella sp. WP5 | 0.49 | EX31_RS13330 | | efflux transporter outer membrane subunit | 0.65 | EX31_RS22470 | | multidrug efflux RND transporter permease subunit | low | > 89 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.47 | H281DRAFT_04169 | | outer membrane protein, multidrug efflux system | 0.64 | H281DRAFT_04170 | | multidrug efflux pump | 0.65 | 2 |
| Serratia liquefaciens MT49 | 0.46 | IAI46_16730 | | efflux transporter outer membrane subunit | 0.66 | IAI46_16735 | | efflux RND transporter permease subunit | low | > 86 |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS34590 | | multidrug transporter | 0.63 | BPHYT_RS16170 | | multidrug efflux RND transporter permease subunit | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.46 | GFF4245 | | RND efflux system, outer membrane lipoprotein CmeC | 0.65 | GFF4379 | | RND efflux system, inner membrane transporter CmeB | low | > 78 |
| Caulobacter crescentus NA1000 | 0.45 | CCNA_00849 | | outer membrane efflux protein | 0.61 | CCNA_00850 | | cation/multidrug efflux pump acrB2 | 0.79 | 1 |
| Caulobacter crescentus NA1000 Δfur | 0.45 | CCNA_00849 | | outer membrane efflux protein | 0.61 | CCNA_00850 | | cation/multidrug efflux pump acrB2 | 0.70 | 22 |
| Variovorax sp. SCN45 | 0.45 | GFF3820 | | Efflux transport system, outer membrane factor (OMF) lipoprotein | 0.59 | GFF5990 | | RND efflux system, inner membrane transporter | low | > 127 |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS05320 | | efflux transporter outer membrane subunit | 0.52 | ABZR87_RS05315 | | efflux RND transporter permease subunit | 0.90 | 1 |
| Variovorax sp. OAS795 | 0.44 | ABID97_RS00330 | | efflux transporter outer membrane subunit | 0.53 | ABID97_RS00325 | | efflux RND transporter permease subunit | 0.87 | 2 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_4447 | | RND efflux system, outer membrane lipoprotein CmeC | 0.51 | Ac3H11_4448 | | RND efflux system, inner membrane transporter CmeB | 0.74 | 1 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF3841 | | RND efflux system, outer membrane lipoprotein CmeC | 0.52 | GFF3840 | | RND efflux system, inner membrane transporter CmeB | low | > 90 |
| Castellaniella sp019104865 MT123 | 0.39 | ABCV34_RS04220 | | efflux transporter outer membrane subunit | 0.48 | ABCV34_RS04225 | | efflux RND transporter permease subunit | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.39 | DVU2815 | | outer membrane efflux protein (TIGR) | 0.63 | DVU2816 | | multidrug resistance protein (TIGR) | low | > 55 |
| Escherichia coli ECOR38 | 0.38 | HEPCGN_00590 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.65 | HEPCGN_06820 | acrB | efflux RND transporter permease AcrB | low | > 85 |
| Escherichia coli Nissle 1917 | 0.38 | ECOLIN_RS03130 | | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.65 | ECOLIN_RS02750 | | efflux RND transporter permease AcrB | — | — |
| Escherichia fergusonii Becca | 0.37 | EFB2_03522 | | Cation efflux system protein CusC | 0.65 | EFB2_03596 | | Multidrug efflux pump subunit AcrB | low | > 86 |
| Escherichia coli ECRC99 | 0.37 | KEDOAH_20270 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.65 | KEDOAH_19760 | acrB | efflux RND transporter permease AcrB | — | — |
| Escherichia coli ECRC102 | 0.37 | NIAGMN_05755 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.65 | NIAGMN_06260 | acrB | efflux RND transporter permease AcrB | — | — |
| Escherichia coli ECRC98 | 0.37 | JDDGAC_11345 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.60 | JDDGAC_25915 | acrD | multidrug efflux RND transporter permease AcrD | — | — |
| Escherichia coli ECRC101 | 0.37 | OKFHMN_07700 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.65 | OKFHMN_08205 | acrB | efflux RND transporter permease AcrB | — | — |
| Escherichia coli ECRC101 | 0.37 | MCAODC_26915 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.65 | MCAODC_27430 | acrB | efflux RND transporter permease AcrB | — | — |
| Escherichia coli ECRC62 | 0.37 | BNILDI_22090 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.65 | BNILDI_22555 | acrB | efflux RND transporter permease AcrB | — | — |
| Escherichia coli ECOR27 | 0.37 | NOLOHH_24080 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | 0.65 | NOLOHH_01140 | acrB | efflux RND transporter permease AcrB | low | > 57 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.36 | OHPLBJKB_03137 | | Cation efflux system protein CusC | 0.65 | OHPLBJKB_03212 | | Multidrug efflux pump subunit AcrB | low | > 73 |
| Escherichia coli BW25113 | 0.36 | b0572 | cusC | copper/silver efflux system, outer membrane component (NCBI) | 0.65 | b0462 | acrB | multidrug efflux system protein (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.36 | ECD_00533 | | copper/silver efflux system, outer membrane component | 0.65 | ECD_00413 | | multidrug efflux system protein | low | > 60 |
| Enterobacter asburiae PDN3 | 0.36 | EX28DRAFT_1166 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.65 | EX28DRAFT_2496 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | low | > 76 |
| Acinetobacter radioresistens SK82 | 0.35 | MPMX26_00688 | | Outer membrane protein OprM | 0.59 | MPMX26_00689 | | Multidrug resistance protein MexB | 0.97 | 2 |
| Enterobacter sp. TBS_079 | 0.35 | MPMX20_02318 | | Cation efflux system protein CusC | 0.65 | MPMX20_01064 | | Multidrug efflux pump subunit AcrB | low | > 85 |
| Shewanella sp. ANA-3 | 0.35 | Shewana3_4297 | | copper/silver efflux system outer membrane protein CusC (RefSeq) | 0.64 | Shewana3_4045 | | hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) | low | > 73 |
| Dickeya dianthicola 67-19 | 0.35 | HGI48_RS03490 | | Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC | 0.63 | HGI48_RS05790 | | multidrug efflux RND transporter permease subunit | low | > 71 |
| Dechlorosoma suillum PS | 0.35 | Dsui_3183 | | efflux transporter, outer membrane factor lipoprotein, NodT family | 0.46 | Dsui_3182 | | hydrophobe/amphiphile efflux-1 (HAE1) family transporter | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.35 | Ga0059261_0558 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.51 | Ga0059261_0559 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | low | > 68 |
| Dickeya dianthicola ME23 | 0.35 | DZA65_RS03600 | | efflux transporter outer membrane subunit | 0.63 | DZA65_RS06115 | | multidrug efflux RND transporter permease subunit | low | > 75 |
| Dickeya dadantii 3937 | 0.34 | DDA3937_RS14115 | | efflux transporter outer membrane subunit | 0.64 | DDA3937_RS05735 | | multidrug efflux RND transporter permease subunit | low | > 74 |
| Klebsiella michiganensis M5al | 0.33 | BWI76_RS27700 | | multidrug transporter | 0.65 | BWI76_RS06775 | | multidrug efflux RND transporter permease subunit | low | > 92 |
| Kangiella aquimarina DSM 16071 | 0.31 | B158DRAFT_0732 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.46 | B158DRAFT_0733 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | 0.98 | 1 |
| Parabacteroides merdae CL09T00C40 | 0.26 | HMPREF1078_RS00015 | | efflux transporter outer membrane subunit | 0.35 | HMPREF1078_RS08425 | | efflux RND transporter permease subunit | low | > 61 |
| Pantoea sp. MT58 | 0.24 | IAI47_12395 | | efflux transporter outer membrane subunit | 0.65 | IAI47_14515 | | multidrug efflux RND transporter permease subunit | low | > 76 |
| Lysobacter sp. OAE881 | 0.24 | ABIE51_RS10130 | | efflux transporter outer membrane subunit | 0.47 | ABIE51_RS17980 | | multidrug efflux RND transporter permease subunit | low | > 62 |
| Rhodopseudomonas palustris CGA009 | 0.21 | TX73_013300 | | efflux transporter outer membrane subunit | 0.57 | TX73_012255 | | efflux RND transporter permease subunit | low | > 86 |
| Bosea sp. OAE506 | 0.20 | ABIE41_RS01590 | | efflux transporter outer membrane subunit | 0.60 | ABIE41_RS01595 | | efflux RND transporter permease subunit | low | > 77 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.20 | CA265_RS05050 | | RND transporter | 0.33 | CA265_RS23010 | | hydrophobe/amphiphile efflux-1 family RND transporter | 0.29 | 8 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.18 | ABZR88_RS12550 | | efflux transporter outer membrane subunit | 0.36 | ABZR88_RS12545 | | efflux RND transporter permease subunit | 0.74 | 1 |
| Shewanella oneidensis MR-1 | 0.18 | SO0822 | | outer membrane efflux family protein (NCBI ptt file) | 0.64 | SO4692 | | AcrB/AcrD/AcrF family protein (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.15 | MIT1002_00868 | | Toluene efflux pump outer membrane protein TtgF precursor | 0.56 | MIT1002_00135 | | Multidrug-efflux transporter MexB | low | > 70 |
Not shown: 9 genomes with orthologs for Psest_0311 only; 14 genomes with orthologs for Psest_0310 only