Conservation of cofitness between GFF722 and GFF2780 in Hydrogenophaga sp. GW460-11-11-14-LB1

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF722 NADPH dependent preQ0 reductase (EC 1.7.1.13) 1.0 GFF2780 Pyruvate kinase (EC 2.7.1.40) 0.76 11
Acidovorax sp. GW101-3H11 0.79 Ac3H11_1595 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.82 Ac3H11_654 Pyruvate kinase (EC 2.7.1.40) low > 79
Variovorax sp. SCN45 0.72 GFF6017 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) 0.82 GFF5504 Pyruvate kinase (EC 2.7.1.40) low > 127
Variovorax sp. OAS795 0.70 ABID97_RS07920 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.81 ABID97_RS01755 pyruvate kinase low > 91
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS03135 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.70 BPHYT_RS16265 hypothetical protein low > 109
Ralstonia solanacearum PSI07 0.59 RPSI07_RS21815 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.68 RPSI07_RS21150 pyruvate kinase low > 81
Ralstonia solanacearum GMI1000 0.58 RS_RS02220 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.68 RS_RS02865 pyruvate kinase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_01889 7-cyano-7-deazaguanine reductase 0.69 H281DRAFT_04189 pyruvate kinase low > 103
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS01975 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.69 QEN71_RS02430 pyruvate kinase low > 153
Ralstonia solanacearum UW163 0.57 UW163_RS02195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.68 UW163_RS01430 pyruvate kinase — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS11390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.68 RALBFv3_RS12180 pyruvate kinase low > 76
Paraburkholderia graminis OAS925 0.57 ABIE53_000759 7-cyano-7-deazaguanine reductase 0.69 ABIE53_003427 pyruvate kinase low > 113
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS02310 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.68 RR42_RS03210 pyruvate kinase low > 128
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS07355 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.69 ABZR87_RS08070 pyruvate kinase low > 80
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS19515 7-cyano-7-deazaguanine reductase 0.68 HSERO_RS03350 hypothetical protein low > 78
Dechlorosoma suillum PS 0.52 Dsui_0505 7-cyano-7-deazaguanine reductase 0.62 Dsui_0052 pyruvate kinase low > 51
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_13395 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.44 OKGIIK_01070 pyk pyruvate kinase low > 52
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS16195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.42 ABZR86_RS18630 pyruvate kinase low > 74
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS10510 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 LRK54_RS05775 pyruvate kinase low > 59
Rhodanobacter denitrificans MT42 0.51 LRK55_RS10150 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 LRK55_RS05530 pyruvate kinase low > 63
Shewanella loihica PV-4 0.50 Shew_2654 queF 7-cyano-7-deazaguanine reductase (RefSeq) 0.46 Shew_2050 pyruvate kinase (RefSeq) — —
Shewanella oneidensis MR-1 0.50 SO1608 conserved hypothetical protein (NCBI ptt file) 0.45 SO2491 pykA pyruvate kinase II (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.49 MIT1002_00988 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.48 MIT1002_02409 Pyruvate kinase II — —
Shewanella sp. ANA-3 0.49 Shewana3_2835 queF 7-cyano-7-deazaguanine reductase (RefSeq) 0.45 Shewana3_2153 pyruvate kinase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_04620 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.47 CSW01_10025 pyruvate kinase low > 62
Rahnella sp. WP5 0.48 EX31_RS13085 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.46 EX31_RS10640 pyruvate kinase low > 89
Enterobacter asburiae PDN3 0.48 EX28DRAFT_2876 7-cyano-7-deazaguanine reductase 0.45 EX28DRAFT_0702 pyruvate kinase low > 76
Shewanella amazonensis SB2B 0.48 Sama_1120 queF 7-cyano-7-deazaguanine reductase (RefSeq) 0.45 Sama_1814 pyruvate kinase (RefSeq) low > 62
Enterobacter sp. TBS_079 0.47 MPMX20_03664 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.45 MPMX20_02759 Pyruvate kinase II low > 85
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_4015 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.47 PfGW456L13_1813 Pyruvate kinase (EC 2.7.1.40) 0.42 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF4849 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.45 GFF1633 Pyruvate kinase (EC 2.7.1.40) low > 78
Klebsiella michiganensis M5al 0.47 BWI76_RS22865 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.45 BWI76_RS18115 pyruvate kinase low > 92
Escherichia coli Nissle 1917 0.47 ECOLIN_RS15580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 ECOLIN_RS10330 pyruvate kinase — —
Pantoea sp. MT58 0.47 IAI47_04050 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.46 IAI47_08485 pyruvate kinase low > 76
Escherichia fergusonii Becca 0.47 EFB2_01123 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.45 EFB2_02088 Pyruvate kinase II low > 86
Escherichia coli ECRC62 0.47 BNILDI_10575 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 BNILDI_15630 pyk pyruvate kinase — —
Escherichia coli ECRC102 0.47 NIAGMN_17960 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 NIAGMN_01740 pyk pyruvate kinase — —
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_2159 7-cyano-7-deazaguanine reductase 0.49 B158DRAFT_1404 pyruvate kinase low > 40
Escherichia coli ECRC98 0.47 JDDGAC_23855 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 JDDGAC_00895 pyk pyruvate kinase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_1907 GTP cyclohydrolase I 0.45 Psyr_4029 pyruvate kinase — —
Escherichia coli ECRC101 0.47 MCAODC_10715 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 MCAODC_19085 pyk pyruvate kinase — —
Escherichia coli ECOR27 0.47 NOLOHH_12070 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 NOLOHH_16835 pyk pyruvate kinase low > 57
Escherichia coli ECOR38 0.47 HEPCGN_19445 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 HEPCGN_04725 pyk pyruvate kinase low > 85
Escherichia coli ECRC101 0.47 OKFHMN_20190 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 OKFHMN_26320 pyk pyruvate kinase — —
Escherichia coli ECRC99 0.47 KEDOAH_07940 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.45 KEDOAH_01785 pyk pyruvate kinase — —
Pseudomonas simiae WCS417 0.47 PS417_07695 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.46 PS417_22620 pyruvate kinase low > 88
Escherichia coli BL21 0.47 ECD_02639 7-cyano-7-deazaguanine reductase (NADPH-dependent) 0.45 ECD_01825 pyruvate kinase II low > 60
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_1907 GTP cyclohydrolase I 0.45 Psyr_4029 pyruvate kinase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_00937 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.45 OHPLBJKB_01874 Pyruvate kinase II low > 73
Escherichia coli BW25113 0.47 b2794 yqcD hypothetical protein (NCBI) 0.45 b1854 pykA pyruvate kinase (NCBI) low > 76
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_00345 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.47 AO353_03775 pyruvate kinase low > 101
Pseudomonas fluorescens SBW25 0.47 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.46 PFLU_RS24255 pyruvate kinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.46 PFLU_RS24255 pyruvate kinase low > 109
Dickeya dadantii 3937 0.46 DDA3937_RS04655 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.46 DDA3937_RS10125 pyruvate kinase low > 74
Dickeya dianthicola ME23 0.46 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.46 DZA65_RS10570 pyruvate kinase low > 75
Erwinia tracheiphila SCR3 0.46 LU632_RS06280 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.46 LU632_RS13370 pyk pyruvate kinase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.4789.1 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.40 Xcc-8004.1243.1 Pyruvate kinase (EC 2.7.1.40) low > 74
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_65 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.47 Pf1N1B4_678 Pyruvate kinase (EC 2.7.1.40) low > 87
Dickeya dianthicola 67-19 0.46 HGI48_RS04615 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.46 HGI48_RS10155 pyruvate kinase low > 71
Pseudomonas sp. RS175 0.46 PFR28_01136 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.47 PFR28_03455 Pyruvate kinase II low > 88
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_02205 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.47 AO356_17830 pyruvate kinase low > 104
Pseudomonas sp. S08-1 0.46 OH686_22700 queuine synthase 0.44 OH686_18800 pyruvate kinase low > 80
Pseudomonas putida KT2440 0.46 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.46 PP_1362 pyruvate kinase II low > 96
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_2264 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.47 Pf6N2E2_5494 Pyruvate kinase (EC 2.7.1.40) 0.24 84
Pectobacterium carotovorum WPP14 0.45 HER17_RS16390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.47 HER17_RS11790 pyruvate kinase low > 75
Serratia liquefaciens MT49 0.45 IAI46_21580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.46 IAI46_14585 pyruvate kinase low > 86
Pseudomonas stutzeri RCH2 0.44 Psest_2714 7-cyano-7-deazaguanine reductase 0.47 Psest_3190 pyruvate kinase low > 67
Lysobacter sp. OAE881 0.43 ABIE51_RS00515 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.42 ABIE51_RS17040 pyruvate kinase low > 62
Marinobacter adhaerens HP15 0.42 HP15_1463 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.45 HP15_2176 pyruvate kinase II low > 73
Castellaniella sp019104865 MT123 0.42 ABCV34_RS06920 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.47 ABCV34_RS02525 pyruvate kinase low > 48

Not shown: 1 genomes with orthologs for GFF722 only; 32 genomes with orthologs for GFF2780 only