Conservation of cofitness between PGA1_c35420 and PGA1_c25150 in Phaeobacter inhibens DSM 17395

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c35420 adenosylhomocysteinase AhcY 1.0 PGA1_c25150 ATP-dependent Clp protease ATP-binding subunit 0.50 7
Dinoroseobacter shibae DFL-12 0.87 Dshi_3426 adenosylhomocysteinase (RefSeq) 0.87 Dshi_2939 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) low > 64
Agrobacterium fabrum C58 0.80 Atu0029 S-adenosylhomocysteine hydrolase 0.69 Atu1364 ATP-dependent Clp protease, ATP-binding subunit low > 89
Sinorhizobium meliloti 1021 0.80 SMc02755 S-adenosyl-L-homocysteine hydrolase 0.71 SMc02109 ATP-dependent Clp protease ATP-binding subunit protein — —
Rhizobium sp. OAE497 0.80 ABIE40_RS19385 adenosylhomocysteinase 0.71 ABIE40_RS08865 ATP-dependent Clp protease ATP-binding subunit ClpA low > 107
Rhodospirillum rubrum S1H 0.71 Rru_A3444 Adenosylhomocysteinase (NCBI) 0.71 Rru_A2109 ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) — —
Bosea sp. OAE506 0.70 ABIE41_RS02700 adenosylhomocysteinase 0.72 ABIE41_RS18235 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Brevundimonas sp. GW460-12-10-14-LB2 0.70 A4249_RS12185 adenosylhomocysteinase 0.72 A4249_RS08390 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Sphingomonas koreensis DSMZ 15582 0.69 Ga0059261_4018 adenosylhomocysteinase (EC 3.3.1.1) 0.68 Ga0059261_1001 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) — —
Caulobacter crescentus NA1000 Δfur 0.69 CCNA_00257 adenosylhomocysteinase 0.73 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 67
Caulobacter crescentus NA1000 0.69 CCNA_00257 adenosylhomocysteinase 0.73 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 66
Kangiella aquimarina DSM 16071 0.68 B158DRAFT_0178 adenosylhomocysteinase (EC 3.3.1.1) 0.58 B158DRAFT_1505 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) — —
Rhodopseudomonas palustris CGA009 0.68 TX73_020805 adenosylhomocysteinase 0.73 TX73_016270 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS28725 adenosylhomocysteinase 0.58 QEN71_RS03005 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Magnetospirillum magneticum AMB-1 0.67 AMB_RS22210 adenosylhomocysteinase 0.70 AMB_RS05705 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_05799 adenosylhomocysteinase 0.58 H281DRAFT_04082 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS18715 adenosylhomocysteinase 0.58 BPHYT_RS15710 ATP-dependent Clp protease ATP-binding protein — —
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS21435 S-adenosyl-L-homocysteine hydrolase 0.60 HSERO_RS07030 ATP-dependent Clp protease ATP-binding protein — —
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS01375 S-adenosyl-L-homocysteine hydrolase 0.58 RR42_RS17105 Clp protease ClpX — —
Dechlorosoma suillum PS 0.64 Dsui_0642 adenosylhomocysteinase 0.60 Dsui_0009 ATP-dependent Clp protease ATP-binding subunit clpA — —
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS04855 adenosylhomocysteinase 0.59 ABZR87_RS00435 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum GMI1000 0.63 RS_RS00470 adenosylhomocysteinase 0.59 RS_RS12370 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Castellaniella sp019104865 MT123 0.63 ABCV34_RS13540 adenosylhomocysteinase 0.56 ABCV34_RS05305 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Acidovorax sp. GW101-3H11 0.63 Ac3H11_3043 Adenosylhomocysteinase (EC 3.3.1.1) 0.58 Ac3H11_2456 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS09885 adenosylhomocysteinase 0.59 RALBFv3_RS04810 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum UW163 0.63 UW163_RS03695 adenosylhomocysteinase 0.59 UW163_RS08860 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Variovorax sp. SCN45 0.62 GFF2053 Adenosylhomocysteinase (EC 3.3.1.1) 0.58 GFF341 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Variovorax sp. OAS795 0.62 ABID97_RS25025 adenosylhomocysteinase 0.57 ABID97_RS16910 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Lysobacter sp. OAE881 0.62 ABIE51_RS16485 adenosylhomocysteinase 0.59 ABIE51_RS11490 ATP-dependent Clp protease ATP-binding subunit ClpA low > 62
Ralstonia solanacearum PSI07 0.62 RPSI07_RS23485 adenosylhomocysteinase 0.58 RPSI07_RS12575 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF1694 Adenosylhomocysteinase (EC 3.3.1.1) 0.58 GFF4521 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_11825 ahcY adenosylhomocysteinase 0.57 OKGIIK_06890 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Rhodanobacter denitrificans FW104-10B01 0.61 LRK54_RS12070 adenosylhomocysteinase 0.58 LRK54_RS00420 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Rhodanobacter denitrificans MT42 0.61 LRK55_RS11805 adenosylhomocysteinase 0.58 LRK55_RS00160 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Azospirillum brasilense Sp245 0.61 AZOBR_RS19045 S-adenosyl-L-homocysteine hydrolase 0.71 AZOBR_RS05175 ATP-dependent Clp protease ATP-binding protein — —
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.4317.1 Adenosylhomocysteinase (EC 3.3.1.1) 0.59 Xcc-8004.2754.1 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Azospirillum sp. SherDot2 0.60 MPMX19_00023 Adenosylhomocysteinase 0.71 MPMX19_00503 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS11565 adenosylhomocysteinase 0.58 ABZR86_RS02200 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Desulfovibrio vulgaris Hildenborough JW710 0.55 DVU0607 ahcY adenosylhomocysteinase (TIGR) 0.51 DVU1602 clpA ATP-dependent Clp protease, ATP-binding subunit ClpA (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.55 DvMF_2580 S-adenosyl-L-homocysteine hydrolase (RefSeq) 0.50 DvMF_0458 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) — —
Marinobacter adhaerens HP15 0.46 HP15_2916 adenosylhomocysteinase 0.59 HP15_2080 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas stutzeri RCH2 0.45 Psest_0314 adenosylhomocysteinase 0.58 Psest_2027 ATP-dependent Clp protease ATP-binding subunit clpA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_0460 adenosylhomocysteinase 0.58 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Acinetobacter radioresistens SK82 0.44 MPMX26_01003 Adenosylhomocysteinase 0.55 MPMX26_01284 ATP-dependent Clp protease ATP-binding subunit ClpA low > 36
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_0460 adenosylhomocysteinase 0.58 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_1051 Adenosylhomocysteinase (EC 3.3.1.1) 0.58 PfGW456L13_2646 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas sp. S08-1 0.44 OH686_10815 adenosylhomocysteinase 0.58 OH686_00235 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas sp. RS175 0.44 PFR28_04201 Adenosylhomocysteinase 0.59 PFR28_02613 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_08010 adenosylhomocysteinase 0.58 AO353_27675 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_2385 Adenosylhomocysteinase (EC 3.3.1.1) 0.58 Pf1N1B4_4055 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_13610 adenosylhomocysteinase 0.58 AO356_22150 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS28160 adenosylhomocysteinase 0.58 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens SBW25 0.44 PFLU_RS28160 adenosylhomocysteinase 0.58 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_4639 Adenosylhomocysteinase (EC 3.3.1.1) 0.58 Pf6N2E2_292 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Pseudomonas putida KT2440 0.44 PP_4976 Adenosylhomocysteinase 0.58 PP_4008 ATP-dependent serine protease — —
Pseudomonas simiae WCS417 0.43 PS417_26505 adenosylhomocysteinase 0.59 PS417_16510 Clp protease ClpX — —
Klebsiella michiganensis M5al 0.11 BWI76_RS18745 adenosylhomocysteinase 0.58 BWI76_RS09615 ATP-dependent Clp protease ATP-binding subunit ClpA low > 92

Not shown: 12 genomes with orthologs for PGA1_c35420 only; 32 genomes with orthologs for PGA1_c25150 only