Conservation of cofitness between GFF3669 and GFF2391 in Sphingobium sp. HT1-2

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF3669 D-arabinose-5-phosphate isomerase (EC 5.3.1.13) 1.0 GFF2391 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) 0.75 12
Caulobacter crescentus NA1000 0.43 CCNA_02346 arabinose-5-phosphate isomerase 0.79 CCNA_02254 isovaleryl-CoA dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_02346 arabinose-5-phosphate isomerase 0.79 CCNA_02254 isovaleryl-CoA dehydrogenase low > 67
Azospirillum sp. SherDot2 0.43 MPMX19_02664 Arabinose 5-phosphate isomerase KdsD 0.66 MPMX19_03935 Acyl-CoA dehydrogenase, short-chain specific low > 112
Magnetospirillum magneticum AMB-1 0.42 AMB_RS19905 KpsF/GutQ family sugar-phosphate isomerase 0.68 AMB_RS03480 isovaleryl-CoA dehydrogenase — —
Xanthobacter sp. DMC5 0.42 GFF3814 Arabinose 5-phosphate isomerase KdsD 0.69 GFF744 Acyl-CoA dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1667.1 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 0.66 Xcc-8004.321.1 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) — —
Rhodopseudomonas palustris CGA009 0.41 TX73_004530 KpsF/GutQ family sugar-phosphate isomerase 0.71 TX73_008290 isovaleryl-CoA dehydrogenase — —
Sinorhizobium meliloti 1021 0.41 SMc02268 capsule expression protein 0.66 SM_b21121 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) — —
Azospirillum brasilense Sp245 0.40 AZOBR_RS18850 arabinose 5-phosphate isomerase 0.66 AZOBR_RS22310 isovaleryl-CoA dehydrogenase low > 97
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_02290 gutQ D-arabinose 5-phosphate isomerase 0.59 OKGIIK_04045 caiA acyl-CoA dehydrogenase — —
Rhodanobacter sp000427505 FW510-R12 0.40 LRK53_RS15680 KpsF/GutQ family sugar-phosphate isomerase 0.59 LRK53_RS13365 isovaleryl-CoA dehydrogenase — —
Pseudomonas sp. S08-1 0.40 OH686_08515 D-arabinose-5-phosphate isomerase 0.62 OH686_00855 Isovaleryl-CoA dehydrogenase — —
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS12900 KpsF/GutQ family sugar-phosphate isomerase 0.59 LRK54_RS15275 isovaleryl-CoA dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.40 Dshi_3588 KpsF/GutQ family protein (RefSeq) 0.66 Dshi_1297 acyl-CoA dehydrogenase domain protein (RefSeq) — —
Rhodanobacter denitrificans MT42 0.39 LRK55_RS12600 KpsF/GutQ family sugar-phosphate isomerase 0.59 LRK55_RS14990 isovaleryl-CoA dehydrogenase — —
Bosea sp. OAE506 0.39 ABIE41_RS06160 KpsF/GutQ family sugar-phosphate isomerase 0.70 ABIE41_RS14775 isovaleryl-CoA dehydrogenase — —
Pseudomonas stutzeri RCH2 0.39 Psest_3308 KpsF/GutQ family protein 0.65 Psest_1084 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) — —
Rhodospirillum rubrum S1H 0.39 Rru_A0014 KpsF/GutQ (NCBI) 0.64 Rru_A1948 Acyl-CoA dehydrogenase (NCBI) — —
Lysobacter sp. OAE881 0.39 ABIE51_RS15930 KpsF/GutQ family sugar-phosphate isomerase 0.57 ABIE51_RS13125 isovaleryl-CoA dehydrogenase — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_4270 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 0.59 Ac3H11_2991 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) — —
Pseudomonas putida KT2440 0.38 PP_0957 D-arabinose 5-phosphate isomerase 0.63 PP_4064 isovaleryl-CoA dehydrogenase low > 96
Pseudomonas aeruginosa PUPa3 0.38 DQ20_RS56650 kdsD;inference=COORDINATES arabinose-5-phosphate isomerase KdsD 0.63 DQ20_RS38580 liuA;inference=COORDINATES isovaleryl-CoA dehydrogenase — —
Pseudomonas segetis P6 0.38 ACVTMO_RS19095 KpsF/GutQ family sugar-phosphate isomerase 0.62 ACVTMO_RS11755 isovaleryl-CoA dehydrogenase low > 75
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS19840 KpsF/GutQ family sugar-phosphate isomerase 0.59 ABZR86_RS20555 isovaleryl-CoA dehydrogenase — —
Pseudomonas aeruginosa PA14 0.38 IKLFDK_01795 arabinose-5-phosphate isomerase KdsD 0.63 IKLFDK_09850 isovaleryl-CoA dehydrogenase — —
Pseudomonas aeruginosa MRSN321 0.38 DY961_RS24190 kdsD;inference=COORDINATES arabinose-5-phosphate isomerase KdsD 0.63 DY961_RS16260 liuA;inference=COORDINATES isovaleryl-CoA dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.38 PGA1_c36010 arabinose 5-phosphate isomerase KdsD 0.64 PGA1_c10280 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) — —
Pseudomonas sp. DMC3 0.38 GFF1833 Arabinose 5-phosphate isomerase KdsD 0.64 GFF1474 Acyl-CoA dehydrogenase — —
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS02930 KpsF/GutQ family protein 0.62 BPHYT_RS23260 isovaleryl-CoA dehydrogenase low > 109
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS02105 arabinose 5-phosphate isomerase 0.59 RR42_RS26910 isovaleryl-CoA dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS01780 KpsF/GutQ family sugar-phosphate isomerase 0.61 QEN71_RS12870 isovaleryl-CoA dehydrogenase low > 153
Variovorax sp. OAS795 0.38 ABID97_RS02630 KpsF/GutQ family sugar-phosphate isomerase 0.63 ABID97_RS25140 isovaleryl-CoA dehydrogenase — —
Pseudomonas orientalis W4I3 0.37 QF045_RS07360 KpsF/GutQ family sugar-phosphate isomerase 0.63 QF045_RS18695 isovaleryl-CoA dehydrogenase — —
Paraburkholderia graminis OAS925 0.37 ABIE53_000723 arabinose-5-phosphate isomerase 0.61 ABIE53_005465 isovaleryl-CoA dehydrogenase low > 113
Pseudomonas simiae WCS417 0.37 PS417_04370 D-arabinose 5-phosphate isomerase 0.64 PS417_17015 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) — —
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_3262 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 0.63 Pf6N2E2_2191 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF2442 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 0.59 GFF1725 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) — —
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_01922 arabinose-5-phosphate isomerase 0.62 H281DRAFT_01346 isovaleryl-CoA dehydrogenase low > 103
Agrobacterium fabrum C58 0.37 Atu3774 capsule expression protein 0.70 Atu3477 acyl-CoA dehydrogenase — —
Pseudomonas sp. BP01 0.37 JOY50_RS11155 SIS domain-containing protein 0.63 JOY50_RS06790 isovaleryl-CoA dehydrogenase low > 84
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_07010 D-arabinose 5-phosphate isomerase 0.63 AO356_01580 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) — —
Escherichia fergusonii Becca 0.37 EFB2_00626 Arabinose 5-phosphate isomerase KdsD 0.22 EFB2_01909 putative acyl-CoA dehydrogenase fadE25 low > 86
Rhizobium sp. OAE497 0.37 ABIE40_RS16240 KpsF/GutQ family sugar-phosphate isomerase 0.63 ABIE40_RS20795 isovaleryl-CoA dehydrogenase — —
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_01080 Arabinose 5-phosphate isomerase KdsD 0.63 GEMAOFIL_03713 Acyl-CoA dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_5009 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 0.64 PfGW456L13_2591 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) — —
Pseudomonas fluorescens SBW25 0.37 PFLU_RS04425 KpsF/GutQ family sugar-phosphate isomerase 0.63 PFLU_RS18965 isovaleryl-CoA dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS04425 KpsF/GutQ family sugar-phosphate isomerase 0.63 PFLU_RS18965 isovaleryl-CoA dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS19830 sugar phosphate isomerase 0.62 HSERO_RS23440 isovaleryl-CoA dehydrogenase — —
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_2085 KpsF/GutQ family protein 0.67 B158DRAFT_2512 Acyl-CoA dehydrogenases — —
Pseudomonas sp. RS175 0.37 PFR28_00178 Arabinose 5-phosphate isomerase KdsD 0.64 PFR28_01260 Acyl-CoA dehydrogenase — —
Pseudomonas sp. SVBP6 0.37 COO64_RS04310 KpsF/GutQ family sugar-phosphate isomerase 0.63 COO64_RS24755 isovaleryl-CoA dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_05155 D-arabinose 5-phosphate isomerase 0.63 AO353_20350 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) — —
Escherichia coli Nissle 1917 0.37 ECOLIN_RS18400 arabinose-5-phosphate isomerase KdsD 0.22 ECOLIN_RS11565 colibactin biosynthesis dehydrogenase ClbF — —
Dechlorosoma suillum PS 0.36 Dsui_1382 KpsF/GutQ family protein 0.62 Dsui_0975 acyl-CoA dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_1075 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 0.63 Pf1N1B4_3987 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) — —
Shewanella oneidensis MR-1 0.36 SO3956 carbohydrate isomerase, KpsF/GutQ family (NCBI ptt file) 0.66 SO1897 ivd isovaleryl-CoA dehydrogenase (NCBI ptt file) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_4142 KpsF/GutQ 0.64 Psyr_2470 isovaleryl-CoA dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_4142 KpsF/GutQ 0.64 Psyr_2470 isovaleryl-CoA dehydrogenase — —
Shewanella sp. ANA-3 0.36 Shewana3_0677 KpsF/GutQ family protein (RefSeq) 0.66 Shewana3_1672 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) — —
Variovorax sp. SCN45 0.35 GFF3271 D-arabinose-5-phosphate isomerase (EC 5.3.1.13) 0.63 GFF2006 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) — —
Alteromonas macleodii MIT1002 0.35 MIT1002_00832 Arabinose 5-phosphate isomerase KdsD 0.63 MIT1002_01669 Acyl-CoA dehydrogenase — —
Shewanella amazonensis SB2B 0.34 Sama_3083 arabinose-5-phosphate isomerase (RefSeq) 0.65 Sama_1362 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) low > 62
Shewanella loihica PV-4 0.34 Shew_3306 KpsF/GutQ family protein (RefSeq) 0.66 Shew_2570 acyl-CoA dehydrogenase domain-containing protein (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS12300 KpsF/GutQ family sugar-phosphate isomerase 0.79 A4249_RS07370 isovaleryl-CoA dehydrogenase — —
Marinobacter adhaerens HP15 0.33 HP15_2437 KpsF/GutQ family protein 0.62 HP15_1005 acyl-CoA dehydrogenase domain protein — —

Not shown: 46 genomes with orthologs for GFF3669 only; 0 genomes with orthologs for GFF2391 only