| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_2311 | | flagellar biosynthetic protein FliQ | 1.0 | HP15_2302 | | flagellar biosynthesis sigma factor FliA | 0.85 | 18 |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_03765 | | flagellar biosynthetic protein FliQ | 0.58 | AO356_03730 | | flagellar biosynthesis sigma factor | 0.92 | 12 |
| Pseudomonas putida KT2440 | 0.63 | PP_4354 | | flagellar export apparatus subunit | 0.58 | PP_4341 | | RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons | 0.79 | 12 |
| Pseudomonas sp. RS175 | 0.62 | PFR28_00846 | | Flagellar biosynthetic protein FliQ | 0.58 | PFR28_00852 | | RNA polymerase sigma factor FliA | 0.92 | 14 |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_18750 | | flagellar biosynthetic protein FliQ | 0.58 | AO353_18785 | | flagellar biosynthesis sigma factor | 0.82 | 5 |
| Pseudomonas fluorescens SBW25 | 0.62 | PFLU_RS21705 | | flagellar biosynthesis protein FliQ | 0.58 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | 0.93 | 11 |
| Pseudomonas simiae WCS417 | 0.62 | PS417_19735 | | flagellar biosynthesis protein FliQ | 0.58 | PS417_19695 | | flagellar biosynthesis sigma factor | 0.93 | 13 |
| Pseudomonas fluorescens SBW25-INTG | 0.62 | PFLU_RS21705 | | flagellar biosynthesis protein FliQ | 0.58 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | 0.95 | 7 |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_4338 | | Flagellar biosynthesis protein FliQ | 0.58 | PfGW456L13_4331 | | RNA polymerase sigma factor for flagellar operon | 0.32 | 9 |
| Pseudomonas fluorescens FW300-N2E2 | 0.62 | Pf6N2E2_2579 | | Flagellar biosynthesis protein FliQ | 0.58 | Pf6N2E2_2573 | | RNA polymerase sigma factor for flagellar operon | 0.92 | 12 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.61 | Psyr_3443 | | Flagellar biosynthesis protein FliQ | 0.58 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.71 | 5 |
| Pseudomonas fluorescens FW300-N1B4 | 0.61 | Pf1N1B4_3619 | | Flagellar biosynthesis protein FliQ | 0.58 | Pf1N1B4_3626 | | RNA polymerase sigma factor for flagellar operon | 0.38 | 2 |
| Pseudomonas syringae pv. syringae B728a | 0.61 | Psyr_3443 | | Flagellar biosynthesis protein FliQ | 0.58 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.84 | 2 |
| Pseudomonas stutzeri RCH2 | 0.60 | Psest_1733 | | flagellar biosynthetic protein FliQ | 0.58 | Psest_1740 | | RNA polymerase sigma factor, FliA/WhiG family | 0.84 | 7 |
| Shewanella amazonensis SB2B | 0.58 | Sama_2286 | | flagellar biosynthetic protein FliQ (RefSeq) | 0.56 | Sama_2280 | fliA | flagellar biosynthesis sigma factor (RefSeq) | 0.95 | 20 |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_1353 | | flagellar biosynthetic protein FliQ (RefSeq) | 0.55 | Shewana3_1359 | fliA | flagellar biosynthesis sigma factor (RefSeq) | — | — |
| Pseudomonas sp. S08-1 | 0.58 | OH686_02765 | | flagellar biosynthetic protein FliQ | 0.61 | OH686_02730 | | RNA polymerase sigma factor for flagellar operon | 0.84 | 30 |
| Shewanella oneidensis MR-1 | 0.57 | SO3217 | fliQ | flagellar biosynthetic protein FliQ (NCBI ptt file) | 0.55 | SO3210 | fliA | RNA polymerase sigma-27 factor (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.57 | MIT1002_01096 | | Flagellar biosynthetic protein FliQ | 0.56 | MIT1002_01103 | | Sigma-F factor | low | > 70 |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS28850 | | flagellar biosynthesis protein FliQ | 0.45 | QEN71_RS28940 | | RNA polymerase sigma factor FliA | 0.89 | 102 |
| Enterobacter asburiae PDN3 | 0.52 | EX28DRAFT_0605 | | flagellar biosynthetic protein FliQ | 0.47 | EX28DRAFT_0625 | | RNA polymerase sigma factor, FliA/WhiG family | 0.68 | 25 |
| Enterobacter sp. TBS_079 | 0.52 | MPMX20_02946 | | Flagellar biosynthetic protein FliQ | 0.47 | MPMX20_02847 | | RNA polymerase sigma factor FliA | 0.69 | 29 |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_10590 | | flagellar biosynthetic protein FliQ | 0.52 | CSW01_10335 | | RNA polymerase sigma factor FliA | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.50 | GFF4090 | | Flagellar biosynthesis protein FliQ | 0.39 | GFF1428 | | RNA polymerase sigma factor for flagellar operon | low | > 90 |
| Rahnella sp. WP5 | 0.49 | EX31_RS09595 | | flagellar biosynthesis protein FliQ | 0.46 | EX31_RS09450 | | RNA polymerase sigma factor FliA | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.49 | GFF4007 | | Flagellar biosynthesis protein FliQ | 0.47 | GFF1690 | | RNA polymerase sigma factor for flagellar operon | 0.64 | 35 |
| Acidovorax sp. GW101-3H11 | 0.48 | Ac3H11_1415 | | Flagellar biosynthesis protein FliQ | 0.41 | Ac3H11_1381 | | RNA polymerase sigma factor for flagellar operon | — | — |
| Dickeya dadantii 3937 | 0.47 | DDA3937_RS13420 | | flagellar biosynthesis protein FliQ | 0.46 | DDA3937_RS13300 | | RNA polymerase sigma factor FliA | 0.95 | 26 |
| Dickeya dianthicola ME23 | 0.47 | DZA65_RS13950 | | flagellar biosynthesis protein FliQ | 0.46 | DZA65_RS13835 | | RNA polymerase sigma factor FliA | 0.99 | 16 |
| Dickeya dianthicola 67-19 | 0.47 | HGI48_RS13465 | | flagellar biosynthesis protein FliQ | 0.46 | HGI48_RS13350 | | RNA polymerase sigma factor FliA | 0.81 | 22 |
| Serratia liquefaciens MT49 | 0.47 | IAI46_15895 | | flagellar biosynthesis protein FliQ | 0.46 | IAI46_15785 | | RNA polymerase sigma factor FliA | low | > 86 |
| Variovorax sp. SCN45 | 0.47 | GFF5739 | | Flagellar biosynthesis protein FliQ | 0.43 | GFF5774 | | RNA polymerase sigma factor for flagellar operon | low | > 127 |
| Erwinia tracheiphila SCR3 | 0.47 | LU632_RS10520 | fliQ | flagellar biosynthesis protein FliQ | 0.47 | LU632_RS13785 | | RNA polymerase sigma factor FliA | low | > 74 |
| Dechlorosoma suillum PS | 0.46 | Dsui_1745 | | flagellar biosynthetic protein FliQ | 0.45 | Dsui_1726 | | RNA polymerase sigma factor, FliA/WhiG family | 0.68 | 14 |
| Pantoea sp. MT58 | 0.46 | IAI47_07975 | | flagellar biosynthesis protein FliQ | 0.47 | IAI47_08160 | | RNA polymerase sigma factor FliA | 0.83 | 19 |
| Ralstonia solanacearum GMI1000 | 0.45 | RS_RS18955 | | flagellar biosynthetic protein FliQ | 0.42 | RS_RS23830 | | RNA polymerase sigma factor FliA | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.45 | HSERO_RS10255 | | flagellar biosynthesis protein FliQ | 0.45 | HSERO_RS10160 | | flagellar biosynthesis sigma factor | 0.86 | 32 |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS01455 | | flagellar biosynthetic protein FliQ | 0.42 | RPSI07_RS06165 | | RNA polymerase sigma factor FliA | low | > 81 |
| Escherichia coli ECOR38 | 0.44 | HEPCGN_04020 | fliQ | flagellar biosynthesis protein FliQ | 0.47 | HEPCGN_04135 | fliA | RNA polymerase sigma factor FliA | low | > 85 |
| Shewanella loihica PV-4 | 0.43 | Shew_1377 | | flagellar biosynthetic protein FliQ (RefSeq) | 0.56 | Shew_1383 | fliA | flagellar biosynthesis sigma factor (RefSeq) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.43 | RR42_RS23355 | | flagellar biosynthetic protein FliQ | 0.43 | RR42_RS35750 | | DNA-directed RNA polymerase sigma-70 factor | low | > 128 |
| Escherichia coli ECRC62 | 0.43 | BNILDI_15080 | fliQ | flagellar biosynthesis protein FliQ | 0.47 | BNILDI_15190 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC102 | 0.43 | NIAGMN_02395 | fliQ | flagellar biosynthesis protein FliQ | 0.47 | NIAGMN_02270 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECOR27 | 0.43 | NOLOHH_16290 | fliQ | flagellar biosynthesis protein FliQ | 0.47 | NOLOHH_16400 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC98 | 0.43 | JDDGAC_00245 | fliQ | flagellar biosynthesis protein FliQ | 0.47 | JDDGAC_00370 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC99 | 0.43 | KEDOAH_02435 | fliQ | flagellar biosynthesis protein FliQ | 0.47 | KEDOAH_02310 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia fergusonii Becca | 0.43 | EFB2_01997 | | Flagellar biosynthetic protein FliQ | 0.47 | EFB2_02023 | | RNA polymerase sigma factor FliA | low | > 86 |
| Escherichia coli BW25113 | 0.43 | b1949 | fliQ | flagellar biosynthesis protein Q (NCBI) | 0.47 | b1922 | fliA | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | 0.31 | 31 |
| Escherichia coli ECRC101 | 0.43 | OKFHMN_25660 | fliQ | flagellar biosynthesis protein FliQ | 0.47 | OKFHMN_25780 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.43 | OHPLBJKB_01780 | | hypothetical protein | 0.47 | OHPLBJKB_01807 | | RNA polymerase sigma factor FliA | low | > 73 |
| Escherichia coli ECRC101 | 0.43 | MCAODC_19735 | fliQ | flagellar biosynthesis protein FliQ | 0.47 | MCAODC_19610 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli Nissle 1917 | 0.43 | ECOLIN_RS11115 | | flagellar biosynthesis protein FliQ | 0.47 | ECOLIN_RS10975 | | RNA polymerase sigma factor FliA | — | — |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS05700 | | flagellar biosynthesis protein FliQ | 0.42 | ABCV34_RS05605 | | RNA polymerase sigma factor FliA | low | > 48 |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS22215 | | flagellar biosynthesis protein FliQ | 0.44 | ABZR87_RS18040 | | RNA polymerase sigma factor FliA | — | — |
| Paraburkholderia graminis OAS925 | 0.39 | ABIE53_000085 | | flagellar biosynthetic protein FliQ | 0.46 | ABIE53_000108 | | RNA polymerase sigma factor for flagellar operon FliA | 0.98 | 9 |
| Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS18830 | | flagellar biosynthesis protein FliQ | 0.45 | BPHYT_RS18925 | | RNA polymerase sigma70 | 0.91 | 16 |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_02800 | fliQ | flagellar biosynthesis protein FliQ | 0.53 | OKGIIK_02830 | fliA | RNA polymerase sigma factor FliA | low | > 52 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_05775 | | flagellar biosynthetic protein FliQ | 0.46 | H281DRAFT_05756 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.76 | 15 |
| Pectobacterium carotovorum WPP14 | 0.39 | HER17_RS08225 | | flagellar biosynthesis protein FliQ | 0.44 | HER17_RS08355 | | RNA polymerase sigma factor FliA | 0.86 | 15 |
| Ralstonia solanacearum UW163 | 0.39 | UW163_RS17515 | | flagellar biosynthetic protein FliQ | 0.43 | UW163_RS21665 | | RNA polymerase sigma factor FliA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS21670 | | flagellar biosynthetic protein FliQ | 0.43 | RALBFv3_RS17485 | | RNA polymerase sigma factor FliA | — | — |
| Rhodanobacter denitrificans MT42 | 0.39 | LRK55_RS13290 | | flagellar biosynthesis protein FliQ | 0.53 | LRK55_RS13320 | | RNA polymerase sigma factor FliA | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.39 | LRK54_RS13550 | | flagellar biosynthesis protein FliQ | 0.53 | LRK54_RS13580 | | RNA polymerase sigma factor FliA | 0.72 | 8 |
| Sphingomonas koreensis DSMZ 15582 | 0.37 | Ga0059261_2061 | | flagellar biosynthetic protein FliQ | 0.27 | Ga0059261_2081 | | RNA polymerase sigma factor, FliA/WhiG family | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS20235 | | flagellar biosynthesis protein FliQ | 0.50 | ABZR86_RS20265 | | RNA polymerase sigma factor FliA | low | > 74 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.32 | DVU0043 | fliQ | flagellar biosynthetic protein FliQ (TIGR) | 0.30 | DVU3229 | fliA | RNA polymerase sigma factor for flagellar operon FliA (TIGR) | 0.87 | 29 |
| Desulfovibrio vulgaris Miyazaki F | 0.32 | DvMF_2216 | | flagellar biosynthetic protein FliQ (RefSeq) | 0.31 | DvMF_2011 | | RNA polymerase, sigma 28 subunit, FliA/WhiG (RefSeq) | 0.87 | 28 |
Not shown: 8 genomes with orthologs for HP15_2311 only; 2 genomes with orthologs for HP15_2302 only