Conservation of cofitness between GFF517 and GFF2346 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF517 Oligopeptidase A (EC 3.4.24.70) 1.0 GFF2346 Argininosuccinate lyase (EC 4.3.2.1) 0.51 18
Escherichia coli BW25113 0.94 b3498 prlC oligopeptidase A (NCBI) 0.95 b3960 argH argininosuccinate lyase (NCBI) low > 76
Escherichia coli ECOR38 0.94 HEPCGN_15325 prlC oligopeptidase A 0.95 HEPCGN_12220 argH argininosuccinate lyase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.94 OHPLBJKB_00205 Oligopeptidase A 0.95 OHPLBJKB_04090 Argininosuccinate lyase low > 73
Escherichia fergusonii Becca 0.94 EFB2_00317 Oligopeptidase A 0.95 EFB2_04654 Argininosuccinate lyase low > 86
Escherichia coli ECRC102 0.94 NIAGMN_14180 prlC oligopeptidase A 0.93 NIAGMN_11325 argH argininosuccinate lyase — —
Escherichia coli ECRC101 0.94 MCAODC_06930 prlC oligopeptidase A 0.95 MCAODC_04075 argH argininosuccinate lyase — —
Escherichia coli ECRC99 0.94 KEDOAH_11730 prlC oligopeptidase A 0.95 KEDOAH_14585 argH argininosuccinate lyase — —
Escherichia coli ECRC98 0.94 JDDGAC_20045 prlC oligopeptidase A 0.95 JDDGAC_17200 argH argininosuccinate lyase — —
Escherichia coli ECRC101 0.94 OKFHMN_16415 prlC oligopeptidase A 0.95 OKFHMN_13575 argH argininosuccinate lyase — —
Escherichia coli Nissle 1917 0.94 ECOLIN_RS19985 oligopeptidase A 0.95 ECOLIN_RS22855 argininosuccinate lyase low > 52
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.94 EX28DRAFT_4422 argininosuccinate lyase low > 76
Escherichia coli ECRC62 0.93 BNILDI_03210 prlC oligopeptidase A 0.94 BNILDI_05805 argH argininosuccinate lyase — —
Escherichia coli BL21 0.93 ECD_03347 oligopeptidase A 0.95 ECD_03845 argininosuccinate lyase low > 60
Escherichia coli ECOR27 0.93 NOLOHH_08350 prlC oligopeptidase A 0.94 NOLOHH_05720 argH argininosuccinate lyase low > 57
Enterobacter sp. TBS_079 0.93 MPMX20_04397 Oligopeptidase A 0.94 MPMX20_04520 Argininosuccinate lyase low > 85
Klebsiella michiganensis M5al 0.92 BWI76_RS26610 oligopeptidase A 0.95 BWI76_RS00855 argininosuccinate lyase low > 92
Pantoea sp. MT58 0.87 IAI47_01345 oligopeptidase A 0.90 IAI47_00920 argininosuccinate lyase low > 76
Erwinia tracheiphila SCR3 0.86 LU632_RS19470 prlC oligopeptidase A 0.87 LU632_RS19600 argH argininosuccinate lyase low > 74
Pectobacterium carotovorum WPP14 0.85 HER17_RS21300 oligopeptidase A 0.87 HER17_RS20620 argininosuccinate lyase low > 75
Dickeya dianthicola ME23 0.83 DZA65_RS00035 oligopeptidase A 0.85 DZA65_RS00945 argininosuccinate lyase low > 75
Dickeya dadantii 3937 0.83 DDA3937_RS21265 oligopeptidase A 0.87 DDA3937_RS20340 argininosuccinate lyase low > 74
Serratia liquefaciens MT49 0.83 IAI46_24210 oligopeptidase A 0.90 IAI46_24500 argininosuccinate lyase low > 86
Dickeya dianthicola 67-19 0.82 HGI48_RS00045 oligopeptidase A 0.86 HGI48_RS00885 argininosuccinate lyase low > 71
Rahnella sp. WP5 0.82 EX31_RS05165 oligopeptidase A 0.89 EX31_RS14180 argininosuccinate lyase low > 89
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_01010 oligopeptidase A 0.73 CSW01_13360 argininosuccinate lyase low > 62
Shewanella loihica PV-4 0.67 Shew_3657 oligopeptidase A (RefSeq) 0.62 Shew_0206 argininosuccinate lyase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.65 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.62 SO0279 argH argininosuccinate lyase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.65 Shewana3_4051 oligopeptidase A (RefSeq) 0.63 Shewana3_3901 argininosuccinate lyase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.65 Sama_3546 oligopeptidase A (RefSeq) 0.65 Sama_0260 argininosuccinate lyase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.64 MIT1002_03633 Oligopeptidase A 0.57 MIT1002_00467 Argininosuccinate lyase low > 70
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0457 Zn-dependent oligopeptidases 0.22 B158DRAFT_1980 argininosuccinate lyase low > 40
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.46 Psyr_0065 argininosuccinate lyase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.46 Psyr_0065 argininosuccinate lyase — —
Pseudomonas sp. RS175 0.57 PFR28_04699 Oligopeptidase A 0.46 PFR28_04367 Argininosuccinate lyase — —
Marinobacter adhaerens HP15 0.57 HP15_3759 oligopeptidase A-like protein 0.46 HP15_243 argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.46 Pf6N2E2_4429 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas putida KT2440 0.57 PP_0096 oligopeptidase A 0.45 PP_0184 Argininosuccinate lyase low > 96
Pseudomonas simiae WCS417 0.57 PS417_00245 oligopeptidase A 0.46 PS417_27540 argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_11120 oligopeptidase A 0.46 AO356_12780 argininosuccinate lyase low > 104
Pseudomonas fluorescens SBW25 0.57 PFLU_RS00240 oligopeptidase A 0.46 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS00240 oligopeptidase A 0.46 PFLU_RS29220 argininosuccinate lyase — —
Pseudomonas stutzeri RCH2 0.57 Psest_4320 Zn-dependent oligopeptidases 0.46 Psest_3751 argininosuccinate lyase — —
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.46 Pf1N1B4_2183 Argininosuccinate lyase (EC 4.3.2.1) — —
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.46 PfGW456L13_854 Argininosuccinate lyase (EC 4.3.2.1) low > 87
Pseudomonas sp. S08-1 0.56 OH686_12360 Oligopeptidase A 0.47 OH686_13885 argininosuccinate lyase low > 80
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_10775 oligopeptidase A 0.46 AO353_09000 argininosuccinate lyase low > 101
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_15380 dcp oligopeptidase A 0.20 OKGIIK_09430 argH argininosuccinate lyase low > 52
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS14940 M3 family metallopeptidase 0.19 ABZR86_RS08695 arginosuccinate lyase (EC 4.3.2.1) (from data) low > 74
Dechlorosoma suillum PS 0.49 Dsui_0046 Zn-dependent oligopeptidase 0.43 Dsui_0111 argininosuccinate lyase — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS05695 M3 family metallopeptidase 0.41 QEN71_RS24970 argininosuccinate lyase low > 153
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS07290 oligopeptidase A 0.42 HSERO_RS14685 argininosuccinate lyase — —
Paraburkholderia graminis OAS925 0.48 ABIE53_002798 oligopeptidase A 0.42 ABIE53_001311 argininosuccinate lyase — —
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS12875 oligopeptidase A 0.41 BPHYT_RS05210 argininosuccinate lyase — —
Rhodanobacter denitrificans MT42 0.48 LRK55_RS08380 M3 family metallopeptidase 0.19 LRK55_RS02135 argininosuccinate lyase low > 63
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS08615 M3 family metallopeptidase 0.19 LRK54_RS02380 argininosuccinate lyase low > 59
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A 0.41 H281DRAFT_00194 argininosuccinate lyase low > 103
Ralstonia solanacearum GMI1000 0.47 RS_RS08035 oligopeptidase A 0.41 RS_RS11865 argininosuccinate lyase — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS07340 oligopeptidase A 0.41 RR42_RS15925 argininosuccinate lyase — —
Ralstonia solanacearum UW163 0.47 UW163_RS15000 oligopeptidase A 0.41 UW163_RS09390 argininosuccinate lyase — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS01690 oligopeptidase A 0.41 RALBFv3_RS04280 argininosuccinate lyase — —
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) 0.19 Xcc-8004.2323.1 Argininosuccinate lyase (EC 4.3.2.1) low > 74
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS13490 M3 family metallopeptidase 0.42 ABZR87_RS16170 argininosuccinate lyase low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS15795 oligopeptidase A 0.41 RPSI07_RS13080 argininosuccinate lyase — —
Acinetobacter radioresistens SK82 0.46 MPMX26_02685 Oligopeptidase A 0.44 MPMX26_00185 Argininosuccinate lyase low > 36
Variovorax sp. OAS795 0.45 ABID97_RS14080 M3 family metallopeptidase 0.43 ABID97_RS08190 argininosuccinate lyase — —
Variovorax sp. SCN45 0.45 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.43 GFF3824 Argininosuccinate lyase (EC 4.3.2.1) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.42 GFF736 Argininosuccinate lyase (EC 4.3.2.1) — —
Acidovorax sp. GW101-3H11 0.44 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.43 Ac3H11_1632 Argininosuccinate lyase (EC 4.3.2.1) — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS04180 M3 family metallopeptidase 0.43 ABCV34_RS03060 argininosuccinate lyase — —
Bacteroides stercoris CC31F 0.34 HMPREF1181_RS06150 M3 family metallopeptidase 0.24 HMPREF1181_RS03410 argininosuccinate lyase low > 56
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS17165 M3 family metallopeptidase 0.25 HMPREF1058_RS09585 argininosuccinate lyase low > 67
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS13165 M3 family metallopeptidase 0.25 ABI39_RS07095 argininosuccinate lyase low > 72
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_2572 Zn-dependent oligopeptidases 0.25 Echvi_3852 arginosuccinate lyase (EC 4.3.2.1) (from data) low > 79

Not shown: 2 genomes with orthologs for GFF517 only; 26 genomes with orthologs for GFF2346 only