Conservation of cofitness between Psest_3766 and Psest_2329 in Pseudomonas stutzeri RCH2

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3766 Uncharacterized protein conserved in bacteria 1.0 Psest_2329 Transcriptional regulator 0.35 5
Pseudomonas sp. S08-1 0.79 OH686_13790 Protein of unknown function DUF484 0.92 OH686_01730 Cys regulon transcriptional activator CysB low > 80
Pseudomonas putida KT2440 0.69 PP_5229 conserved protein of unknown function 0.91 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine low > 96
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS29275 DUF484 family protein 0.91 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas fluorescens SBW25 0.67 PFLU_RS29275 DUF484 family protein 0.91 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_0184 Protein of unknown function DUF484 0.89 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_0184 Protein of unknown function DUF484 0.89 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_09045 hypothetical protein 0.92 AO353_19060 CysB family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_12730 hypothetical protein 0.92 AO356_03180 CysB family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_4417 Protein of unknown function DUF484 0.92 Pf6N2E2_2465 Cys regulon transcriptional activator CysB low > 103
Pseudomonas simiae WCS417 0.64 PS417_27590 hypothetical protein 0.91 PS417_08460 CysB family transcriptional regulator — —
Pseudomonas sp. RS175 0.61 PFR28_04377 hypothetical protein 0.92 PFR28_00966 HTH-type transcriptional regulator CysB low > 88
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_843 Protein of unknown function DUF484 0.92 PfGW456L13_2230 Cys regulon transcriptional activator CysB low > 87
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_2172 Protein of unknown function DUF484 0.92 Pf1N1B4_283 Cys regulon transcriptional activator CysB — —
Marinobacter adhaerens HP15 0.39 HP15_249 protein containing DUF484 0.78 HP15_1854 transcriptional regulator, LysR family — —
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS08540 DUF484 family protein 0.35 LRK54_RS00915 LysR substrate-binding domain-containing protein low > 59
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_15330 DUF484 domain-containing protein 0.36 OKGIIK_05975 lysR CysB family transcriptional regulator low > 52
Rhodanobacter denitrificans MT42 0.24 LRK55_RS08305 DUF484 family protein 0.35 LRK55_RS00690 LysR substrate-binding domain-containing protein low > 63
Dechlorosoma suillum PS 0.23 Dsui_0650 hypothetical protein 0.52 Dsui_1988 transcriptional regulator — —
Lysobacter sp. OAE881 0.22 ABIE51_RS03030 DUF484 family protein 0.35 ABIE51_RS15850 LysR family transcriptional regulator low > 62
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_0245 Uncharacterized protein conserved in bacteria 0.43 B158DRAFT_2455 Transcriptional regulator low > 40
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS15020 DUF484 family protein 0.38 ABZR86_RS05885 LysR substrate-binding domain-containing protein low > 74
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.846.1 Protein of unknown function DUF484 0.30 Xcc-8004.1249.1 Transcriptional regulator low > 74
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_00645 DUF484 domain-containing protein 0.68 CSW01_09545 HTH-type transcriptional regulator CysB — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS23685 DUF484 domain-containing protein 0.44 RPSI07_RS17385 CysB family HTH-type transcriptional regulator low > 81
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS05060 DUF484 family protein 0.45 ABZR87_RS11555 CysB family HTH-type transcriptional regulator low > 80
Alteromonas macleodii MIT1002 0.19 MIT1002_00158 hypothetical protein 0.66 MIT1002_02005 Cys regulon transcriptional activator — —
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS00610 hypothetical protein 0.44 RR42_RS12245 transcriptional regulator low > 128
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS09680 DUF484 domain-containing protein 0.44 RALBFv3_RS04610 CysB family HTH-type transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.19 UW163_RS03900 DUF484 domain-containing protein 0.44 UW163_RS09060 CysB family HTH-type transcriptional regulator — —
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS21470 hypothetical protein 0.47 HSERO_RS08245 CysB family transcriptional regulator low > 78
Shewanella sp. ANA-3 0.18 Shewana3_0392 hypothetical protein (RefSeq) 0.65 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) — —
Ralstonia solanacearum GMI1000 0.18 RS_RS00265 DUF484 domain-containing protein 0.44 RS_RS12180 CysB family HTH-type transcriptional regulator — —
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS00360 DUF484 family protein 0.47 QEN71_RS22570 CysB family HTH-type transcriptional regulator low > 153
Shewanella amazonensis SB2B 0.18 Sama_3248 hypothetical protein (RefSeq) 0.65 Sama_1324 cysB transcriptional regulator CysB (RefSeq) — —
Shewanella oneidensis MR-1 0.18 SO4307 conserved hypothetical protein (NCBI ptt file) 0.65 SO2649 cysB cys regulon transcriptional activator (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.17 Shew_0324 hypothetical protein (RefSeq) 0.64 Shew_1624 cysB transcriptional regulator CysB (RefSeq) — —
Pantoea sp. MT58 0.16 IAI47_18405 DUF484 domain-containing protein 0.66 IAI47_09240 HTH-type transcriptional regulator CysB low > 76
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS01660 hypothetical protein 0.47 BPHYT_RS08810 CysB family transcriptional regulator low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF238 Protein of unknown function DUF484 0.66 GFF2712 Cys regulon transcriptional activator CysB — —
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_02201 hypothetical protein 0.47 H281DRAFT_00782 transcriptional regulator, LysR family low > 103
Castellaniella sp019104865 MT123 0.15 ABCV34_RS13460 DUF484 family protein 0.37 ABCV34_RS08230 CysB family HTH-type transcriptional regulator low > 48
Paraburkholderia graminis OAS925 0.15 ABIE53_000427 uncharacterized protein YigA (DUF484 family) 0.47 ABIE53_001994 LysR family cys regulon transcriptional activator low > 113
Rahnella sp. WP5 0.15 EX31_RS15160 DUF484 domain-containing protein 0.67 EX31_RS09890 HTH-type transcriptional regulator CysB low > 89
Acidovorax sp. GW101-3H11 0.15 Ac3H11_1994 Protein of unknown function DUF484 0.43 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI — —
Dickeya dadantii 3937 0.15 DDA3937_RS19895 DUF484 domain-containing protein 0.66 DDA3937_RS10540 HTH-type transcriptional regulator CysB low > 74
Variovorax sp. OAS795 0.15 ABID97_RS06140 DUF484 family protein 0.45 ABID97_RS16600 CysB family HTH-type transcriptional regulator low > 91
Dickeya dianthicola ME23 0.15 DZA65_RS21095 DUF484 domain-containing protein 0.66 DZA65_RS11020 HTH-type transcriptional regulator CysB low > 75
Serratia liquefaciens MT49 0.15 IAI46_00720 DUF484 domain-containing protein 0.66 IAI46_13965 HTH-type transcriptional regulator CysB — —
Dickeya dianthicola 67-19 0.14 HGI48_RS20050 DUF484 domain-containing protein 0.66 HGI48_RS10540 HTH-type transcriptional regulator CysB 0.59 21
Variovorax sp. SCN45 0.14 GFF4492 Protein of unknown function DUF484 0.45 GFF244 Cys regulon transcriptional activator CysB low > 127
Enterobacter sp. TBS_079 0.14 MPMX20_04466 hypothetical protein 0.66 MPMX20_02501 HTH-type transcriptional regulator CysB — —
Erwinia tracheiphila SCR3 0.14 LU632_RS24140 DUF484 domain-containing protein 0.65 LU632_RS12550 cysB HTH-type transcriptional regulator CysB — —
Pectobacterium carotovorum WPP14 0.14 HER17_RS01345 DUF484 domain-containing protein 0.66 HER17_RS10870 HTH-type transcriptional regulator CysB low > 75
Enterobacter asburiae PDN3 0.13 EX28DRAFT_4479 Uncharacterized protein conserved in bacteria 0.66 EX28DRAFT_0946 Transcriptional regulator — —
Klebsiella michiganensis M5al 0.13 BWI76_RS01205 DUF484 family protein 0.65 BWI76_RS11930 LysR family transcriptional regulator CysB — —
Escherichia coli Nissle 1917 0.13 ECOLIN_RS21870 DUF484 domain-containing protein 0.65 ECOLIN_RS07680 HTH-type transcriptional regulator CysB low > 52
Hydrogenophaga sp. GW460-11-11-14-LB1 0.12 GFF546 Protein of unknown function DUF484 0.48 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI low > 90

Not shown: 3 genomes with orthologs for Psest_3766 only; 13 genomes with orthologs for Psest_2329 only