Conservation of cofitness between GFF2571 and GFF1410 in Hydrogenophaga sp. GW460-11-11-14-LB1

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF2571 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 1.0 GFF1410 Flagellar basal-body rod protein FlgG 0.63 1
Acidovorax sp. GW101-3H11 0.57 Ac3H11_4411 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 0.75 Ac3H11_1372 Flagellar basal-body rod protein FlgG low > 79
Variovorax sp. SCN45 0.53 GFF5489 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 0.64 GFF5720 Flagellar basal-body rod protein FlgG low > 127
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS04985 DNA-processing protein DprA 0.62 ABZR87_RS22265 flagellar basal-body rod protein FlgG low > 80
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS09755 DNA-protecting protein DprA 0.65 RALBFv3_RS21715 flagellar basal-body rod protein FlgG low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS03825 DNA-protecting protein DprA 0.65 UW163_RS17470 flagellar basal-body rod protein FlgG — —
Ralstonia solanacearum GMI1000 0.48 RS_RS00340 DNA-protecting protein DprA 0.66 RS_RS18820 flagellar basal-body rod protein FlgG low > 80
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS00150 DNA-processing protein DprA 0.63 QEN71_RS28895 flagellar basal-body rod protein FlgG low > 153
Dechlorosoma suillum PS 0.47 Dsui_0819 DNA protecting protein DprA 0.65 Dsui_1737 flagellar basal-body rod protein FlgG low > 51
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS20480 DNA processing protein DprA 0.63 RR42_RS35700 flagellar basal body rod protein FlgG low > 128
Ralstonia solanacearum PSI07 0.47 RPSI07_RS23610 DNA-protecting protein DprA 0.66 RPSI07_RS01415 flagellar basal-body rod protein FlgG low > 81
Castellaniella sp019104865 MT123 0.46 ABCV34_RS14195 DNA-processing protein DprA 0.58 ABCV34_RS05745 flagellar basal-body rod protein FlgG low > 48
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS23400 DNA processing protein DprA 0.65 HSERO_RS10205 flagellar basal body rod protein FlgG low > 78
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_02242 DNA protecting protein DprA 0.63 H281DRAFT_05767 flagellar basal-body rod protein FlgG low > 103
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS01450 DNA-binding protein 0.63 BPHYT_RS18870 flagellar basal body rod protein FlgG low > 109
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS10145 DNA-processing protein DprA 0.57 LRK54_RS13430 flagellar basal-body rod protein FlgG low > 59
Rhodanobacter denitrificans MT42 0.40 LRK55_RS09785 DNA-processing protein DprA 0.58 LRK55_RS13170 flagellar basal-body rod protein FlgG low > 63
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS13870 DNA-processing protein DprA 0.58 ABZR86_RS20100 flagellar basal-body rod protein FlgG low > 74
Pseudomonas stutzeri RCH2 0.36 Psest_0025 DNA protecting protein DprA 0.56 Psest_2963 flagellar basal-body rod protein FlgG, Gram-negative bacteria low > 67
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_13770 dprA DNA-processing protein DprA 0.57 OKGIIK_02675 flgG flagellar basal-body rod protein FlgG low > 52
Dickeya dianthicola 67-19 0.35 HGI48_RS19210 DNA-protecting protein DprA 0.62 HGI48_RS13500 flagellar basal-body rod protein FlgG low > 71
Dickeya dianthicola ME23 0.34 DZA65_RS20335 DNA-protecting protein DprA 0.62 DZA65_RS13985 flagellar basal-body rod protein FlgG low > 75
Dickeya dadantii 3937 0.34 DDA3937_RS19120 DNA-protecting protein DprA 0.62 DDA3937_RS13455 flagellar basal-body rod protein FlgG low > 74
Shewanella sp. ANA-3 0.34 Shewana3_0037 DNA protecting protein DprA (RefSeq) 0.54 Shewana3_1326 flgG flagellar basal body rod protein FlgG (RefSeq) low > 73
Pseudomonas putida KT2440 0.34 PP_0069 putative Rossmann fold nucleotide-binding protein 0.57 PP_4385 flagellar basal-body rod protein FlgG low > 96
Shewanella oneidensis MR-1 0.33 SO0034 DNA processing protein DprA, putative (NCBI ptt file) 0.54 SO3244 flgG flagellar basal-body rod protein FlgG (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.33 MIT1002_00022 DNA protecting protein DprA 0.46 MIT1002_01046 Distal rod protein low > 70
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 0.61 GFF3359 Flagellar basal-body rod protein FlgG low > 78
Pectobacterium carotovorum WPP14 0.33 HER17_RS02230 DNA-protecting protein DprA 0.61 HER17_RS08190 flagellar basal-body rod protein FlgG low > 75
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_4125 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 0.56 Pf6N2E2_2627 Flagellar basal-body rod protein FlgG low > 103
Shewanella amazonensis SB2B 0.32 Sama_0045 DNA processing protein DprA, putative (RefSeq) 0.54 Sama_2313 flgG flagellar basal body rod protein FlgG (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_11295 DNA processing protein DprA 0.56 AO356_03925 flagellar basal-body rod protein FlgG low > 104
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_648 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 0.56 PfGW456L13_4386 Flagellar basal-body rod protein FlgG low > 87
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS00100 DNA-protecting protein DprA 0.56 PFLU_RS21855 flagellar basal-body rod protein FlgG low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS00100 DNA-protecting protein DprA 0.56 PFLU_RS21855 flagellar basal-body rod protein FlgG low > 109
Escherichia coli ECRC98 0.32 JDDGAC_21165 dprA DNA-protecting protein DprA 0.61 JDDGAC_07310 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli ECRC102 0.32 NIAGMN_15305 dprA DNA-protecting protein DprA 0.61 NIAGMN_24180 flgG flagellar basal-body rod protein FlgG — —
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1910 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 0.57 Pf1N1B4_3569 Flagellar basal-body rod protein FlgG — —
Escherichia coli ECRC101 0.32 MCAODC_08065 dprA DNA-protecting protein DprA 0.61 MCAODC_23010 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli ECOR38 0.32 HEPCGN_16365 dprA DNA-protecting protein DprA 0.61 HEPCGN_23840 flgG flagellar basal-body rod protein FlgG low > 85
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.4746.1 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 0.58 Xcc-8004.2784.1 Flagellar basal-body rod protein FlgG low > 74
Escherichia fergusonii Becca 0.32 EFB2_00538 hypothetical protein 0.61 EFB2_02896 Flagellar basal-body rod protein FlgG low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_00418 hypothetical protein 0.60 OHPLBJKB_02587 Flagellar basal-body rod protein FlgG low > 73
Escherichia coli Nissle 1917 0.32 ECOLIN_RS18860 DNA-protecting protein DprA 0.61 ECOLIN_RS06240 flagellar basal-body rod protein FlgG — —
Escherichia coli BL21 0.32 ECD_03136 DNA recombination-mediator A family protein 0.61 ECD_01074 flagellar component of cell-distal portion of basal-body rod low > 60
Escherichia coli BW25113 0.32 b4473 smf hypothetical protein (NCBI) 0.61 b1078 flgG flagellar component of cell-distal portion of basal-body rod (NCBI) low > 76
Escherichia coli ECRC62 0.32 BNILDI_02185 dprA DNA-protecting protein DprA 0.61 BNILDI_19340 flgG flagellar basal-body rod protein FlgG — —
Escherichia coli ECRC99 0.32 KEDOAH_10605 dprA DNA-protecting protein DprA 0.61 KEDOAH_24105 flgG flagellar basal-body rod protein FlgG — —
Pseudomonas sp. S08-1 0.32 OH686_12505 DNA protecting protein DprA 0.59 OH686_02950 flagellar basal-body rod protein FlgG low > 80
Escherichia coli ECOR27 0.31 NOLOHH_09335 dprA DNA-protecting protein DprA 0.60 NOLOHH_21180 flgG flagellar basal-body rod protein FlgG low > 57
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0042 DNA protecting protein DprA 0.61 EX28DRAFT_1854 flagellar basal-body rod protein FlgG, Gram-negative bacteria low > 76
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0021 DNA protecting protein DprA 0.56 Psyr_3475 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0021 DNA protecting protein DprA 0.56 Psyr_3475 Flagellar basal body rod protein:Protein of unknown function DUF1078 — —
Pseudomonas sp. RS175 0.31 PFR28_04659 hypothetical protein 0.56 PFR28_00805 Flagellar basal-body rod protein FlgG low > 88
Shewanella loihica PV-4 0.31 Shew_3734 DNA protecting protein DprA (RefSeq) 0.54 Shew_1350 flgG flagellar basal body rod protein FlgG (RefSeq) low > 60
Lysobacter sp. OAE881 0.30 ABIE51_RS02235 DNA-processing protein DprA 0.55 ABIE51_RS16695 flagellar basal-body rod protein FlgG low > 62
Enterobacter sp. TBS_079 0.30 MPMX20_04193 hypothetical protein 0.61 MPMX20_01757 Flagellar basal-body rod protein FlgG low > 85
Erwinia tracheiphila SCR3 0.30 LU632_RS22465 dprA DNA-protecting protein DprA 0.64 LU632_RS10420 flgG flagellar basal-body rod protein FlgG low > 74
Azospirillum brasilense Sp245 0.29 AZOBR_RS15885 DNA processing protein DprA 0.53 AZOBR_RS11220 flagellar basal body rod protein FlgG low > 97
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS04240 DNA-processing protein DprA 0.48 A4249_RS09625 flagellar basal-body rod protein FlgG low > 48
Azospirillum sp. SherDot2 0.28 MPMX19_01508 hypothetical protein 0.52 MPMX19_01484 Flagellar basal-body rod protein FlgG low > 112
Magnetospirillum magneticum AMB-1 0.27 AMB_RS03500 DNA-protecting protein DprA 0.49 AMB_RS17680 flagellar basal-body rod protein FlgG low > 64
Caulobacter crescentus NA1000 0.27 CCNA_02529 DNA recombination-mediator protein A, SMF family 0.46 CCNA_02143 flagellar basal-body rod protein flgG low > 66
Dinoroseobacter shibae DFL-12 0.27 Dshi_1138 DNA protecting protein DprA (RefSeq) 0.45 Dshi_3252 flagellar basal-body rod protein FlgG (RefSeq) low > 64
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_02529 DNA recombination-mediator protein A, SMF family 0.46 CCNA_02143 flagellar basal-body rod protein flgG low > 67
Bosea sp. OAE506 0.27 ABIE41_RS17215 DNA-processing protein DprA 0.49 ABIE41_RS13420 flagellar basal-body rod protein FlgG low > 77
Rhizobium sp. OAE497 0.26 ABIE40_RS07365 DNA-processing protein DprA 0.47 ABIE40_RS02985 flagellar basal-body rod protein FlgG low > 107
Phaeobacter inhibens DSM 17395 0.26 PGA1_c06230 putative protein Smf 0.45 PGA1_c35780 flagellar basal-body rod protein FlgG low > 62
Sinorhizobium meliloti 1021 0.26 SMc01363 hypothetical protein 0.46 SMc03030 flagellar basal body rod protein FlgG low > 103
Rhodopseudomonas palustris CGA009 0.25 TX73_016135 DNA-processing protein DprA 0.49 TX73_020220 flagellar basal-body rod protein FlgG low > 86
Rhodospirillum rubrum S1H 0.23 Rru_A3194 SMF protein (NCBI) 0.48 Rru_A2843 hypothetical protein (NCBI) low > 58

Not shown: 17 genomes with orthologs for GFF2571 only; 9 genomes with orthologs for GFF1410 only