Conservation of cofitness between GFF1414 and GFF1280 in Hydrogenophaga sp. GW460-11-11-14-LB1

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF1414 Flagellar basal-body rod protein FlgC 1.0 GFF1280 Type IV fimbrial assembly protein PilC 0.50 16
Acidovorax sp. GW101-3H11 0.83 Ac3H11_1376 Flagellar basal-body rod protein FlgC 0.84 Ac3H11_4765 Type IV fimbrial assembly protein PilC low > 79
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS10185 flagellar basal body rod protein FlgC 0.40 HSERO_RS01765 type II secretion system protein F low > 78
Dechlorosoma suillum PS 0.62 Dsui_1733 flagellar basal-body rod protein FlgC 0.72 Dsui_1319 type II secretory pathway, component PulF low > 51
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS35720 flagellar basal body rod protein FlgC 0.65 RR42_RS17985 type II secretion system protein F low > 128
Escherichia coli ECRC99 0.60 KEDOAH_24085 flgC flagellar basal body rod protein FlgC 0.21 KEDOAH_17610 hofC protein transport protein HofC — —
Escherichia coli ECRC62 0.60 BNILDI_19360 flgC flagellar basal body rod protein FlgC 0.21 BNILDI_08720 hofC protein transport protein HofC — —
Rahnella sp. WP5 0.59 EX31_RS11310 flagellar basal body rod protein FlgC 0.26 EX31_RS03530 protein transport protein HofC low > 89
Serratia liquefaciens MT49 0.58 IAI46_15955 flagellar basal body rod protein FlgC 0.24 IAI46_03515 protein transport protein HofC low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF3355 Flagellar basal-body rod protein FlgC 0.23 GFF133 Type IV fimbrial assembly protein PilC low > 78
Variovorax sp. SCN45 0.58 GFF5716 Flagellar basal-body rod protein FlgC 0.79 GFF2509 Type IV fimbrial assembly protein PilC low > 127
Erwinia tracheiphila SCR3 0.57 LU632_RS10400 flgC flagellar basal body rod protein FlgC 0.26 LU632_RS03025 hofC protein transport protein HofC low > 74
Pantoea sp. MT58 0.57 IAI47_12160 flagellar basal body rod protein FlgC 0.25 IAI47_15860 protein transport protein HofC low > 76
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS18890 flagellar basal body rod protein FlgC 0.29 BPHYT_RS17150 type II secretion system protein low > 109
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS28915 flagellar basal body rod protein FlgC 0.33 QEN71_RS27310 type II secretion system F family protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_05763 flagellar basal-body rod protein FlgC 0.33 H281DRAFT_06256 type IV pilus assembly protein PilC low > 103
Paraburkholderia graminis OAS925 0.56 ABIE53_000101 flagellar basal-body rod protein FlgC 0.31 ABIE53_003595 type IV pilus assembly protein PilC low > 113
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS22285 flagellar basal body rod protein FlgC 0.59 ABZR87_RS01850 type II secretion system F family protein low > 80
Shewanella amazonensis SB2B 0.53 Sama_2317 flgC flagellar basal body rod protein FlgC (RefSeq) 0.47 Sama_0368 type IV pilus biogenesis protein PilC (RefSeq) low > 62
Ralstonia solanacearum UW163 0.53 UW163_RS17450 flagellar basal body rod protein FlgC 0.60 UW163_RS07440 type II secretion system F family protein — —
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS21735 flagellar basal body rod protein FlgC 0.60 RALBFv3_RS06185 type II secretion system F family protein low > 76
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_11220 flagellar basal body rod protein FlgC 0.38 CSW01_12280 type IV pilin assembly protein PilC low > 62
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_02655 flgC flagellar basal body rod protein FlgC 0.48 OKGIIK_10825 pulF Type II secretory pathway, component PulF low > 52
Ralstonia solanacearum PSI07 0.53 RPSI07_RS01395 flagellar basal body rod protein FlgC 0.62 RPSI07_RS11055 type II secretion system F family protein low > 81
Ralstonia solanacearum GMI1000 0.53 RS_RS18800 flagellar basal body rod protein FlgC 0.62 RS_RS14135 type II secretion system F family protein low > 80
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS20080 flagellar basal body rod protein FlgC 0.47 ABZR86_RS10045 type II secretion system F family protein low > 74
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS13410 flagellar basal body rod protein FlgC 0.44 LRK54_RS03950 type II secretion system F family protein low > 59
Rhodanobacter denitrificans MT42 0.51 LRK55_RS13150 flagellar basal body rod protein FlgC 0.44 LRK55_RS03720 type II secretion system F family protein 0.64 19
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_3480 Flagellar basal-body rod protein FlgC 0.54 Psyr_0797 type II secretion system protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_3480 Flagellar basal-body rod protein FlgC 0.54 Psyr_0797 type II secretion system protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_5695 Flagellar basal-body rod protein FlgC 0.52 Pf6N2E2_5141 Type IV fimbrial assembly protein PilC low > 103
Shewanella loihica PV-4 0.50 Shew_1346 flgC flagellar basal body rod protein FlgC (RefSeq) 0.44 Shew_3439 type II secretion system protein (RefSeq) — —
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_18920 flagellar basal-body rod protein FlgC 0.53 AO356_16010 type II secretion system protein F low > 104
Pseudomonas sp. RS175 0.49 PFR28_03253 Flagellar basal-body rod protein FlgC 0.52 PFR28_03732 Type II secretion system protein F low > 88
Shewanella sp. ANA-3 0.49 Shewana3_1322 flgC flagellar basal body rod protein FlgC (RefSeq) 0.45 Shewana3_0418 type II secretion system protein (RefSeq) low > 73
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_2002 Flagellar basal-body rod protein FlgC 0.54 PfGW456L13_1509 Type IV fimbrial assembly protein PilC low > 87
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_02855 flagellar basal-body rod protein FlgC 0.55 AO353_14325 type II secretion system protein F low > 101
Lysobacter sp. OAE881 0.48 ABIE51_RS16675 flagellar basal body rod protein FlgC 0.52 ABIE51_RS04810 type II secretion system F family protein low > 62
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_3473 Flagellar basal-body rod protein FlgC 0.55 Pf1N1B4_2841 Type IV fimbrial assembly protein PilC low > 87
Shewanella oneidensis MR-1 0.48 SO3249 flgC flagellar basal-body rod protein FlgC (NCBI ptt file) 0.47 SO0415 type IV pilus biogenesis protein PilC (NCBI ptt file) low > 76
Pseudomonas putida KT2440 0.47 PP_4390 flagellar basal-body rod protein FlgC 0.35 PP_0633 Type 4 fimbrial assembly protein PilC low > 96
Pseudomonas simiae WCS417 0.47 PS417_21565 flagellar basal body rod protein FlgC 0.46 PS417_03900 type II secretion system protein F low > 88
Pseudomonas fluorescens SBW25 0.47 PFLU_RS23175 flagellar basal body rod protein FlgC 0.48 PFLU_RS03945 type II secretion system F family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS23175 flagellar basal body rod protein FlgC 0.48 PFLU_RS03945 type II secretion system F family protein low > 109
Marinobacter adhaerens HP15 0.47 HP15_1468 flagellar basal-body rod protein FlgC-like protein 0.48 HP15_2410 type IV pilus biogenesis protein PilC low > 73
Pseudomonas sp. S08-1 0.46 OH686_02970 flagellar basal-body rod protein FlgC 0.54 OH686_16500 Type IV fimbrial assembly protein PilC low > 80
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.2779.1 Flagellar basal-body rod protein FlgC 0.49 Xcc-8004.1346.1 Type IV fimbrial assembly protein PilC low > 74
Pseudomonas stutzeri RCH2 0.44 Psest_2967 flagellar basal-body rod protein FlgC 0.56 Psest_3287 Type II secretory pathway, component PulF 0.20 55
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU0315 flgC flagellar basal-body rod protein FlgC (TIGR) 0.28 DVU1271 general secretion pathway protein F, putative (TIGR) low > 55
Rhodospirillum rubrum S1H 0.33 Rru_A2825 Flagellar basal-body rod protein FlgC (NCBI) 0.16 Rru_A0114 type II secretion system protein (NCBI) — —
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_2285 flagellar basal-body rod protein FlgC (RefSeq) 0.28 DvMF_1029 type II secretion system protein (RefSeq) low > 51
Caulobacter crescentus NA1000 0.27 CCNA_01005 flagellar basal-body rod protein flgC 0.28 CCNA_00174 type II secretion pathway protein F low > 66
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_01005 flagellar basal-body rod protein flgC 0.28 CCNA_00174 type II secretion pathway protein F low > 67

Not shown: 30 genomes with orthologs for GFF1414 only; 7 genomes with orthologs for GFF1280 only