Conservation of cofitness between GFF2357 and GFF1246 in Variovorax sp. SCN45

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF2357 DNA repair protein RecN 1.0 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.75 7
Acidovorax sp. GW101-3H11 0.64 Ac3H11_3460 DNA repair protein RecN 0.82 Ac3H11_580 FIG001341: Probable Fe(2+)-trafficking protein YggX — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.57 GFF829 DNA repair protein RecN 0.89 GFF4297 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 90
Ralstonia solanacearum UW163 0.43 UW163_RS08210 DNA repair protein RecN 0.82 UW163_RS12845 oxidative damage protection protein — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS05415 DNA repair protein RecN 0.82 RALBFv3_RS15385 oxidative damage protection protein — —
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS01065 DNA repair protein RecN 0.81 ABZR87_RS11010 oxidative damage protection protein low > 80
Ralstonia solanacearum PSI07 0.43 RPSI07_RS11890 DNA repair protein RecN 0.82 RPSI07_RS17970 Fe(2+)-trafficking protein — —
Ralstonia solanacearum GMI1000 0.42 RS_RS13275 DNA repair protein RecN 0.82 RS_RS06190 Fe(2+)-trafficking protein — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS26535 DNA repair protein RecN 0.81 QEN71_RS05615 oxidative damage protection protein low > 153
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS03060 DNA repair protein 0.88 HSERO_RS17325 iron transporter — —
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS05910 DNA repair protein 0.82 RR42_RS13040 iron transporter low > 128
Paraburkholderia graminis OAS925 0.40 ABIE53_000856 DNA repair protein RecN (Recombination protein N) 0.84 ABIE53_002815 Fe-S cluster biosynthesis and repair protein YggX low > 113
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_04692 DNA replication and repair protein RecN 0.84 H281DRAFT_00443 Fe-S cluster biosynthesis and repair protein YggX — —
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS03560 DNA repair protein 0.81 BPHYT_RS12990 iron transporter low > 109
Dechlorosoma suillum PS 0.39 Dsui_3072 DNA repair protein RecN 0.79 Dsui_1571 Fe-S cluster protector protein low > 51
Castellaniella sp019104865 MT123 0.39 ABCV34_RS07470 DNA repair protein RecN 0.62 ABCV34_RS02400 oxidative damage protection protein low > 48
Pseudomonas sp. S08-1 0.34 OH686_17050 DNA repair protein RecN 0.50 OH686_14545 Probable Fe(2+)-trafficking protein YggX low > 80
Rahnella sp. WP5 0.34 EX31_RS21760 DNA repair protein RecN 0.48 EX31_RS02740 oxidative damage protection protein low > 89
Shewanella sp. ANA-3 0.34 Shewana3_1104 recombination and repair protein (RefSeq) 0.55 Shewana3_1180 hypothetical protein (RefSeq) low > 73
Serratia liquefaciens MT49 0.34 IAI46_19635 DNA repair protein RecN 0.52 IAI46_21470 oxidative damage protection protein low > 86
Shewanella amazonensis SB2B 0.34 Sama_1026 recombination and repair protein (RefSeq) 0.59 Sama_2491 hypothetical protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.34 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.55 SO3369 conserved hypothetical protein (NCBI ptt file) low > 76
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_5106 DNA repair protein RecN 0.47 PfGW456L13_367 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF4162 DNA repair protein RecN 0.47 GFF3066 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 78
Enterobacter sp. TBS_079 0.34 MPMX20_03486 DNA repair protein RecN 0.48 MPMX20_03819 putative Fe(2+)-trafficking protein low > 85
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_3370 DNA repair protein RecN 0.50 Pf6N2E2_3847 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 103
Escherichia coli BL21 0.33 ECD_02504 recombination and repair protein 0.47 ECD_02792 oxidative damage protective factor for iron-sulfur proteins low > 61
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_0601 DNA replication and repair protein RecN 0.57 B158DRAFT_0206 Fe-S cluster protector protein low > 40
Escherichia coli Nissle 1917 0.33 ECOLIN_RS14775 DNA repair protein RecN 0.46 ECOLIN_RS16475 oxidative damage protection protein low > 55
Escherichia fergusonii Becca 0.33 EFB2_01277 DNA repair protein RecN 0.47 EFB2_00940 putative Fe(2+)-trafficking protein low > 86
Escherichia coli ECOR38 0.33 HEPCGN_20265 recN DNA repair protein RecN 0.47 HEPCGN_18465 yggX oxidative damage protection protein low > 87
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_4197 DNA replication and repair protein RecN 0.45 Psyr_4902 Protein of unknown function DUF495 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_4197 DNA replication and repair protein RecN 0.45 Psyr_4902 Protein of unknown function DUF495 low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_01091 DNA repair protein RecN 0.47 OHPLBJKB_00754 putative Fe(2+)-trafficking protein low > 73
Escherichia coli ECRC100 0.33 OKFHMN_21145 recN DNA repair protein RecN 0.47 OKFHMN_19195 yggX oxidative damage protection protein low > 80
Escherichia coli ECRC99 0.33 KEDOAH_07075 recN DNA repair protein RecN 0.47 KEDOAH_08945 yggX oxidative damage protection protein — —
Escherichia coli BW25113 0.33 b2616 recN recombination and repair protein (NCBI) 0.47 b2962 yggX hypothetical protein (NCBI) low > 76
Escherichia coli ECRC62 0.33 BNILDI_11620 recN DNA repair protein RecN 0.47 BNILDI_09640 yggX oxidative damage protection protein low > 75
Escherichia coli ECRC101 0.33 MCAODC_11670 recN DNA repair protein RecN 0.47 MCAODC_09715 yggX oxidative damage protection protein low > 87
Escherichia coli ECOR27 0.33 NOLOHH_12815 recN DNA repair protein RecN 0.47 NOLOHH_11055 yggX oxidative damage protection protein low > 75
Escherichia coli ECRC102 0.33 NIAGMN_18915 recN DNA repair protein RecN 0.47 NIAGMN_16960 yggX oxidative damage protection protein — —
Escherichia coli ECRC98 0.33 JDDGAC_24810 recN DNA repair protein RecN 0.47 JDDGAC_22825 yggX oxidative damage protection protein low > 86
Dickeya dadantii 3937 0.33 DDA3937_RS04325 DNA repair protein RecN 0.50 DDA3937_RS04895 oxidative damage protection protein 0.51 39
Pantoea sp. MT58 0.33 IAI47_04810 DNA repair protein RecN 0.48 IAI47_03555 oxidative damage protection protein low > 76
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_04395 DNA repair protein RecN 0.52 CSW01_02405 Fe(2+)-trafficking protein — —
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_1178 DNA repair protein RecN 0.45 Pf1N1B4_1632 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 87
Dickeya dianthicola ME23 0.33 DZA65_RS04235 DNA repair protein RecN 0.49 DZA65_RS05240 oxidative damage protection protein low > 75
Dickeya dianthicola 67-19 0.33 HGI48_RS04320 DNA repair protein RecN 0.49 HGI48_RS04905 oxidative damage protection protein 0.42 71
Enterobacter asburiae PDN3 0.33 EX28DRAFT_2719 DNA repair protein RecN 0.47 EX28DRAFT_2999 Fe-S cluster protector protein low > 76
Pseudomonas sp. RS175 0.33 PFR28_00071 DNA repair protein RecN 0.47 PFR28_04924 putative Fe(2+)-trafficking protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_05660 DNA repair protein RecN 0.47 AO353_12045 iron transporter low > 101
Pectobacterium carotovorum WPP14 0.33 HER17_RS17420 DNA repair protein RecN 0.50 HER17_RS16630 oxidative damage protection protein low > 75
Pseudomonas stutzeri RCH2 0.32 Psest_0962 DNA repair protein RecN 0.51 Psest_0144 Fe-S cluster protector protein low > 67
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_07510 DNA repair protein RecN 0.50 AO356_09835 iron transporter low > 104
Shewanella loihica PV-4 0.32 Shew_1196 recombination and repair protein (RefSeq) 0.50 Shew_1122 hypothetical protein (RefSeq) low > 60
Pseudomonas simiae WCS417 0.32 PS417_24070 recombination and repair protein 0.51 PS417_01540 iron transporter — —
Klebsiella michiganensis M5al 0.32 BWI76_RS21560 DNA repair protein RecN 0.48 BWI76_RS24160 Fe(2+)-trafficking protein — —
Marinobacter adhaerens HP15 0.32 HP15_3084 DNA repair protein RecN 0.54 HP15_3016 Ion traffic superfamily protein low > 73
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS25910 DNA repair protein RecN 0.50 PFLU_RS01585 oxidative damage protection protein low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS25910 DNA repair protein RecN 0.50 PFLU_RS01585 oxidative damage protection protein low > 109
Pseudomonas putida KT2440 0.31 PP_4729 factor used in recombination and DNA repair 0.50 PP_0285 Fe(2+)-trafficking protein — —
Erwinia tracheiphila SCR3 0.30 LU632_RS16985 recN DNA repair protein RecN 0.48 LU632_RS05415 oxidative damage protection protein low > 74
Rhodanobacter denitrificans MT42 0.29 LRK55_RS17815 DNA repair protein RecN 0.57 LRK55_RS13060 oxidative damage protection protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS17960 DNA repair protein RecN 0.57 LRK54_RS13320 oxidative damage protection protein low > 59
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_07340 recN DNA repair protein RecN 0.56 OKGIIK_02560 yggX oxidative damage protection protein low > 52
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.3431.1 DNA repair protein RecN 0.48 Xcc-8004.2121.1 FIG001341: Probable Fe(2+)-trafficking protein YggX — —
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS05665 DNA repair protein RecN 0.54 ABZR86_RS19970 oxidative damage protection protein low > 74
Alteromonas macleodii MIT1002 0.27 MIT1002_01443 Recombination protein N 0.56 MIT1002_00240 putative Fe(2+)-trafficking protein low > 70
Lysobacter sp. OAE881 0.27 ABIE51_RS11655 DNA repair protein RecN 0.49 ABIE51_RS15145 oxidative damage protection protein — —
Acinetobacter radioresistens SK82 0.27 MPMX26_00239 DNA repair protein RecN 0.44 MPMX26_00184 putative Fe(2+)-trafficking protein low > 36

Not shown: 30 genomes with orthologs for GFF2357 only; 1 genomes with orthologs for GFF1246 only