Conservation of cofitness between ECD_04037 and ECD_03089 in Escherichia coli BL21

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04037 methyl-directed mismatch repair protein 1.0 ECD_03089 stringent starvation protein A, phage P1 late gene activator, RNAP-associated acid-resistance protein, inactive glutathione S-transferase-like protein 0.38 43
Escherichia coli BW25113 1.00 b4170 mutL DNA mismatch repair protein (NCBI) 1.00 b3229 sspA stringent starvation protein A (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03872 DNA mismatch repair protein MutL 1.00 OHPLBJKB_00475 Stringent starvation protein A low > 73
Escherichia coli ECRC62 1.00 BNILDI_06960 mutL DNA mismatch repair endonuclease MutL 1.00 BNILDI_01905 sspA stringent starvation protein A low > 75
Escherichia coli ECOR27 1.00 NOLOHH_04530 mutL DNA mismatch repair endonuclease MutL 1.00 NOLOHH_09630 sspA stringent starvation protein A low > 75
Escherichia coli ECOR38 0.99 HEPCGN_10495 mutL DNA mismatch repair endonuclease MutL 1.00 HEPCGN_16705 sspA stringent starvation protein A low > 87
Escherichia coli ECRC101 0.99 MCAODC_02780 mutL DNA mismatch repair endonuclease MutL 1.00 MCAODC_08350 sspA stringent starvation protein A low > 87
Escherichia coli ECRC100 0.99 OKFHMN_12265 mutL DNA mismatch repair endonuclease MutL 1.00 OKFHMN_17830 sspA stringent starvation protein A low > 80
Escherichia coli ECRC99 0.99 KEDOAH_15890 mutL DNA mismatch repair endonuclease MutL 1.00 KEDOAH_10320 sspA stringent starvation protein A — —
Escherichia coli ECRC98 0.99 JDDGAC_15905 mutL DNA mismatch repair endonuclease MutL 1.00 JDDGAC_21455 sspA stringent starvation protein A low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24220 DNA mismatch repair endonuclease MutL 1.00 ECOLIN_RS18520 stringent starvation protein SspA low > 55
Escherichia fergusonii Becca 0.99 EFB2_04365 DNA mismatch repair protein MutL 1.00 EFB2_00601 Stringent starvation protein A low > 86
Escherichia coli ECRC102 0.99 NIAGMN_10115 mutL DNA mismatch repair endonuclease MutL 1.00 NIAGMN_15590 sspA stringent starvation protein A — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF823 DNA mismatch repair protein MutL 0.98 GFF2968 Stringent starvation protein A low > 78
Klebsiella michiganensis M5al 0.83 BWI76_RS02525 DNA mismatch repair protein MutL 0.93 BWI76_RS25335 stringent starvation protein A low > 92
Enterobacter sp. TBS_079 0.81 MPMX20_00451 DNA mismatch repair protein MutL 0.96 MPMX20_04133 Stringent starvation protein A low > 85
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3367 DNA mismatch repair protein MutL 0.96 EX28DRAFT_3278 Glutathione S-transferase low > 76
Pantoea sp. MT58 0.67 IAI47_02580 DNA mismatch repair endonuclease MutL 0.83 IAI47_17235 stringent starvation protein A low > 76
Serratia liquefaciens MT49 0.67 IAI46_01615 DNA mismatch repair endonuclease MutL 0.84 IAI46_22365 stringent starvation protein A low > 86
Erwinia tracheiphila SCR3 0.65 LU632_RS02045 mutL DNA mismatch repair endonuclease MutL 0.85 LU632_RS21330 sspA stringent starvation protein A — —
Rahnella sp. WP5 0.65 EX31_RS08830 DNA mismatch repair endonuclease MutL 0.84 EX31_RS12500 stringent starvation protein A low > 89
Pectobacterium carotovorum WPP14 0.64 HER17_RS02575 DNA mismatch repair endonuclease MutL 0.84 HER17_RS19935 stringent starvation protein A low > 75
Dickeya dadantii 3937 0.62 DDA3937_RS18620 DNA mismatch repair endonuclease MutL 0.84 DDA3937_RS01645 stringent starvation protein A low > 74
Dickeya dianthicola 67-19 0.61 HGI48_RS18555 DNA mismatch repair endonuclease MutL 0.85 HGI48_RS01545 stringent starvation protein A low > 71
Dickeya dianthicola ME23 0.61 DZA65_RS19690 DNA mismatch repair endonuclease MutL 0.85 DZA65_RS01615 stringent starvation protein A low > 75
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_01825 DNA mismatch repair protein MutL 0.74 CSW01_03060 stringent starvation protein A — —
Shewanella amazonensis SB2B 0.39 Sama_3027 mutL DNA mismatch repair protein (RefSeq) 0.70 Sama_3018 sspA stringent starvation protein A (RefSeq) 0.47 14
Shewanella oneidensis MR-1 0.39 SO0601 mutL DNA mismatch repair protein MutL (NCBI ptt file) 0.69 SO0611 sspA stringent starvation protein a (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.38 Shew_0564 DNA mismatch repair protein MutL (RefSeq) 0.70 Shew_0573 sspA stringent starvation protein A (RefSeq) — —
Shewanella sp. ANA-3 0.38 Shewana3_0595 mutL DNA mismatch repair protein (RefSeq) 0.70 Shewana3_0604 sspA stringent starvation protein A (RefSeq) — —
Pseudomonas stutzeri RCH2 0.36 Psest_0681 DNA mismatch repair protein MutL 0.51 Psest_3276 Glutathione S-transferase — —
Pseudomonas sp. S08-1 0.36 OH686_09480 DNA mismatch repair protein MutL 0.54 OH686_08375 Stringent starvation protein A low > 80
Marinobacter adhaerens HP15 0.35 HP15_2501 DNA mismatch repair protein mutL 0.59 HP15_548 glutathione S-transferase, N-terminal domain protein — —
Pseudomonas putida KT2440 0.35 PP_4896 DNA mismatch repair protein MutL 0.51 PP_1320 stringent starvation protein A low > 96
Pseudomonas simiae WCS417 0.35 PS417_02480 DNA mismatch repair protein 0.54 PS417_04170 stringent starvation protein A low > 88
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.53 PFLU_RS04210 stringent starvation protein A low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS02560 DNA mismatch repair endonuclease MutL 0.53 PFLU_RS04210 stringent starvation protein A low > 109
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_3616 DNA mismatch repair protein MutL 0.53 Pf6N2E2_5340 Stringent starvation protein A low > 103
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_0570 DNA mismatch repair protein MutL 0.52 Psyr_4118 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_0570 DNA mismatch repair protein MutL 0.52 Psyr_4118 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal low > 86
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_156 DNA mismatch repair protein MutL 0.54 PfGW456L13_1637 Stringent starvation protein A low > 87
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_08665 DNA mismatch repair protein 0.53 AO356_17080 stringent starvation protein A 0.27 95
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1414 DNA mismatch repair protein MutL 0.54 Pf1N1B4_959 Stringent starvation protein A low > 87
Pseudomonas sp. RS175 0.34 PFR28_05119 DNA mismatch repair protein MutL 0.54 PFR28_03603 Stringent starvation protein A low > 88
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_13135 DNA mismatch repair protein 0.53 AO353_15260 stringent starvation protein A low > 101
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.2256.1 DNA mismatch repair protein MutL 0.46 Xcc-8004.2231.1 Stringent starvation protein A low > 74
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS00855 DNA mismatch repair endonuclease MutL 0.45 ABZR86_RS09865 glutathione S-transferase N-terminal domain-containing protein low > 74
Rhodanobacter denitrificans MT42 0.30 LRK55_RS14865 DNA mismatch repair endonuclease MutL 0.46 LRK55_RS13495 glutathione S-transferase N-terminal domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS15150 DNA mismatch repair endonuclease MutL 0.46 LRK54_RS13780 glutathione S-transferase N-terminal domain-containing protein low > 59
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_03920 mutL DNA mismatch repair endonuclease MutL 0.46 OKGIIK_03020 gstA stringent starvation protein A low > 52
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS05230 DNA mismatch repair endonuclease MutL 0.40 RALBFv3_RS06715 stringent starvation protein A — —
Ralstonia solanacearum UW163 0.28 UW163_RS08395 DNA mismatch repair endonuclease MutL 0.40 UW163_RS06900 stringent starvation protein A — —
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS04190 DNA mismatch repair protein 0.40 HSERO_RS20230 glutathione S-transferase — —
Ralstonia solanacearum GMI1000 0.28 RS_RS12850 DNA mismatch repair protein MutL 0.40 RS_RS14660 transcription modulator protein — —
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS00870 DNA mismatch repair endonuclease MutL 0.40 ABZR87_RS02370 glutathione S-transferase N-terminal domain-containing protein — —
Dechlorosoma suillum PS 0.27 Dsui_1551 DNA mismatch repair protein MutL 0.40 Dsui_1815 glutathione S-transferase — —
Ralstonia solanacearum PSI07 0.27 RPSI07_RS12070 DNA mismatch repair endonuclease MutL 0.40 RPSI07_RS10520 transcription modulator protein — —
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS17205 DNA mismatch repair protein 0.40 RR42_RS18810 stringent starvation protein A — —
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS26435 DNA mismatch repair endonuclease MutL 0.39 QEN71_RS27770 glutathione S-transferase N-terminal domain-containing protein — —
Acinetobacter radioresistens SK82 0.25 MPMX26_01207 DNA mismatch repair protein MutL 0.33 MPMX26_00591 Stringent starvation protein A low > 36
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_04712 DNA mismatch repair protein MutL 0.39 H281DRAFT_05672 RNA polymerase-associated protein — —
Acidovorax sp. GW101-3H11 0.25 Ac3H11_313 DNA mismatch repair protein MutL 0.40 Ac3H11_4753 Stringent starvation protein A — —
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS03650 DNA mismatch repair protein 0.39 BPHYT_RS17615 Glutathione S-transferase domain — —
Castellaniella sp019104865 MT123 0.25 ABCV34_RS08785 DNA mismatch repair endonuclease MutL 0.38 ABCV34_RS12620 glutathione S-transferase N-terminal domain-containing protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF5485 DNA mismatch repair protein MutL 0.39 GFF1292 Stringent starvation protein A — —
Variovorax sp. SCN45 0.24 GFF4800 DNA mismatch repair protein MutL 0.40 GFF6697 Stringent starvation protein A — —
Variovorax sp. OAS795 0.24 ABID97_RS20310 DNA mismatch repair endonuclease MutL 0.39 ABID97_RS22970 glutathione S-transferase N-terminal domain-containing protein — —
Azospirillum sp. SherDot2 0.22 MPMX19_01619 DNA mismatch repair protein MutL 0.13 MPMX19_00253 FtsZ-localized protein A low > 112
Rhodospirillum rubrum S1H 0.22 Rru_A2946 DNA mismatch repair protein (NCBI) 0.12 Rru_A3193 Glutathione S-transferase-like (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS04225 DNA mismatch repair endonuclease MutL 0.13 A4249_RS03640 glutathione S-transferase family protein low > 48
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_0371 DNA mismatch repair protein MutL 0.14 Ga0059261_1536 Glutathione S-transferase low > 68
Bosea sp. OAE506 0.19 ABIE41_RS23235 DNA mismatch repair endonuclease MutL 0.17 ABIE41_RS13585 glutathione S-transferase family protein low > 77

Not shown: 8 genomes with orthologs for ECD_04037 only; 4 genomes with orthologs for ECD_03089 only