| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dechlorosoma suillum PS | 1.0 | Dsui_1622 | | excinuclease ABC, A subunit | 1.0 | Dsui_2149 | | DNA helicase, Rad3 | 0.73 | 16 |
| Ralstonia sp. UNC404CL21Col | 0.79 | ABZR87_RS07120 | | excinuclease ABC subunit UvrA | 0.56 | ABZR87_RS13325 | | ATP-dependent DNA helicase | low | > 80 |
| Ralstonia solanacearum UW163 | 0.78 | UW163_RS02345 | | excinuclease ABC subunit UvrA | 0.56 | UW163_RS14840 | | ATP-dependent DNA helicase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.78 | RALBFv3_RS11235 | | excinuclease ABC subunit UvrA | 0.56 | RALBFv3_RS01530 | | ATP-dependent DNA helicase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.78 | RS_RS02080 | | excinuclease ABC subunit UvrA | 0.56 | RS_RS08195 | | ATP-dependent DNA helicase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.78 | RPSI07_RS22065 | | excinuclease ABC subunit UvrA | 0.56 | RPSI07_RS15960 | | ATP-dependent DNA helicase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.77 | QEN71_RS01825 | | excinuclease ABC subunit UvrA | 0.55 | QEN71_RS06060 | | ATP-dependent DNA helicase | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.77 | BPHYT_RS02970 | | excinuclease ABC subunit A | 0.56 | BPHYT_RS12495 | | helicase | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.77 | HSERO_RS19810 | | excinuclease ABC subunit A | 0.58 | HSERO_RS14855 | | helicase | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.77 | ABIE53_000732 | | excinuclease ABC subunit A | 0.55 | ABIE53_002724 | | ATP-dependent DNA helicase DinG | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.77 | H281DRAFT_01913 | | Excinuclease ABC subunit A | 0.56 | H281DRAFT_00533 | | ATP-dependent DNA helicase DinG | low | > 103 |
| Cupriavidus basilensis FW507-4G11 | 0.77 | RR42_RS02145 | | excinuclease ABC subunit A | 0.58 | RR42_RS07580 | | helicase | 0.66 | 9 |
| Pseudomonas stutzeri RCH2 | 0.75 | Psest_3576 | | excinuclease ABC, A subunit | 0.15 | Psest_2857 | | Rad3-related DNA helicases | 0.30 | 23 |
| Pseudomonas fluorescens FW300-N2E3 | 0.75 | AO353_06855 | | ABC-ATPase UvrA | 0.15 | AO353_17020 | | ATP-dependent DNA helicase DinG | 0.72 | 3 |
| Pseudomonas sp. S08-1 | 0.75 | OH686_15495 | | excinuclease ABC subunit A | 0.16 | OH686_04830 | | ATP-dependent helicase DinG/Rad3 | low | > 80 |
| Pseudomonas simiae WCS417 | 0.75 | PS417_25395 | | excinuclease ABC subunit A | 0.15 | PS417_06510 | | ATP-dependent DNA helicase DinG | 0.43 | 12 |
| Pseudomonas fluorescens GW456-L13 | 0.75 | PfGW456L13_1283 | | Excinuclease ABC subunit A | 0.15 | PfGW456L13_4624 | | ATP-dependent helicase DinG/Rad3 | 0.34 | 26 |
| Pseudomonas fluorescens SBW25-INTG | 0.75 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.15 | PFLU_RS06540 | | ATP-dependent DNA helicase DinG | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.75 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.15 | PFLU_RS06540 | | ATP-dependent DNA helicase DinG | low | > 109 |
| Pseudomonas sp. RS175 | 0.75 | PFR28_03974 | | UvrABC system protein A | 0.15 | PFR28_00520 | | ATP-dependent DNA helicase DinG | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.74 | Pf1N1B4_2611 | | Excinuclease ABC subunit A | 0.15 | Pf1N1B4_3194 | | ATP-dependent helicase DinG/Rad3 | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.74 | AO356_14785 | | ABC-ATPase UvrA | 0.15 | AO356_05425 | | ATP-dependent DNA helicase DinG | 0.84 | 3 |
| Pseudomonas fluorescens FW300-N2E2 | 0.74 | Pf6N2E2_4888 | | Excinuclease ABC subunit A | 0.15 | Pf6N2E2_2942 | | ATP-dependent helicase DinG/Rad3 | 0.66 | 6 |
| Pectobacterium carotovorum WPP14 | 0.73 | HER17_RS03550 | | excinuclease ABC subunit UvrA | 0.40 | HER17_RS11290 | | ATP-dependent DNA helicase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS17610 | | excinuclease ABC subunit UvrA | 0.40 | HGI48_RS11275 | | ATP-dependent DNA helicase | low | > 71 |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_4246 | | excinuclease ABC, A subunit | 0.40 | EX28DRAFT_0750 | | Rad3-related DNA helicases | low | > 76 |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS18735 | | excinuclease ABC subunit UvrA | 0.40 | DZA65_RS11620 | | ATP-dependent DNA helicase | low | > 75 |
| Pantoea sp. MT58 | 0.72 | IAI47_17815 | | excinuclease ABC subunit UvrA | 0.40 | IAI47_08820 | | ATP-dependent DNA helicase | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.72 | GFF1429 | | Excinuclease ABC subunit A | 0.40 | GFF2823 | | DinG family ATP-dependent helicase YoaA | low | > 78 |
| Rahnella sp. WP5 | 0.72 | EX31_RS11990 | | excinuclease ABC subunit UvrA | 0.39 | EX31_RS10615 | | ATP-dependent DNA helicase | low | > 89 |
| Escherichia coli Nissle 1917 | 0.72 | ECOLIN_RS23485 | | excinuclease ABC subunit UvrA | 0.41 | ECOLIN_RS10055 | | ATP-dependent DNA helicase | — | — |
| Serratia liquefaciens MT49 | 0.72 | IAI46_22905 | | excinuclease ABC subunit UvrA | 0.39 | IAI46_14550 | | ATP-dependent DNA helicase | low | > 86 |
| Dickeya dadantii 3937 | 0.72 | DDA3937_RS17605 | | excinuclease ABC subunit UvrA | 0.40 | DDA3937_RS11240 | | ATP-dependent DNA helicase | low | > 74 |
| Enterobacter sp. TBS_079 | 0.72 | MPMX20_00276 | | UvrABC system protein A | 0.40 | MPMX20_02714 | | putative ATP-dependent DNA helicase YoaA | low | > 85 |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_15255 | uvrA | excinuclease ABC subunit UvrA | 0.41 | KEDOAH_01530 | yoaA | putative ATP-dependent DNA helicase YoaA | — | — |
| Escherichia fergusonii Becca | 0.72 | EFB2_04533 | | UvrABC system protein A | 0.41 | EFB2_02192 | | putative ATP-dependent DNA helicase YoaA | low | > 86 |
| Escherichia coli ECRC101 | 0.72 | MCAODC_03405 | uvrA | excinuclease ABC subunit UvrA | 0.41 | MCAODC_18830 | yoaA | putative ATP-dependent DNA helicase YoaA | — | — |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_10740 | uvrA | excinuclease ABC subunit UvrA | 0.41 | NIAGMN_01485 | yoaA | putative ATP-dependent DNA helicase YoaA | — | — |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_16530 | uvrA | excinuclease ABC subunit UvrA | 0.41 | JDDGAC_01155 | yoaA | putative ATP-dependent DNA helicase YoaA | — | — |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_05145 | uvrA | excinuclease ABC subunit UvrA | 0.41 | NOLOHH_17100 | yoaA | putative ATP-dependent DNA helicase YoaA | low | > 57 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_06380 | uvrA | excinuclease ABC subunit UvrA | 0.41 | BNILDI_15885 | yoaA | putative ATP-dependent DNA helicase YoaA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_03983 | | UvrABC system protein A | 0.41 | OHPLBJKB_01925 | | putative ATP-dependent helicase DinG | low | > 73 |
| Escherichia coli BW25113 | 0.72 | b4058 | uvrA | excinuclease ABC subunit A (NCBI) | 0.40 | b1808 | yoaA | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_11510 | uvrA | excinuclease ABC subunit UvrA | 0.41 | HEPCGN_04970 | yoaA | putative ATP-dependent DNA helicase YoaA | low | > 85 |
| Escherichia coli ECRC101 | 0.72 | OKFHMN_12895 | uvrA | excinuclease ABC subunit UvrA | 0.41 | OKFHMN_26580 | yoaA | putative ATP-dependent DNA helicase YoaA | — | — |
| Kangiella aquimarina DSM 16071 | 0.72 | B158DRAFT_0885 | | excinuclease ABC, A subunit | 0.42 | B158DRAFT_2492 | | Rad3-related DNA helicases | 0.54 | 26 |
| Escherichia coli BL21 | 0.72 | ECD_03930 | | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC | 0.41 | ECD_01778 | | putative ATP-dependent helicase, DinG family | — | — |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS01950 | | excinuclease ABC subunit A | 0.40 | BWI76_RS17815 | | ATP-dependent helicase | low | > 92 |
| Vibrio cholerae E7946 ATCC 55056 | 0.71 | CSW01_02080 | | UvrABC system protein A | 0.40 | CSW01_09930 | | ATP-dependent DNA helicase | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS23685 | uvrA | excinuclease ABC subunit UvrA | 0.39 | LU632_RS13150 | | ATP-dependent DNA helicase | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.71 | Xcc-8004.3830.1 | | Excinuclease ABC subunit A | 0.37 | Xcc-8004.1496.1 | | DinG family ATP-dependent helicase YoaA | low | > 74 |
| Shewanella oneidensis MR-1 | 0.71 | SO4030 | uvrA | excinuclease ABC, A subunit (NCBI ptt file) | 0.34 | SO2081 | | ATP-dependent helicase, DinG family (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_3592 | | excinuclease ABC subunit A (RefSeq) | 0.33 | Shewana3_1859 | | helicase c2 (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.70 | MIT1002_00179 | | Excinuclease ABC subunit A | 0.39 | MIT1002_02593 | | putative ATP-dependent helicase DinG | low | > 70 |
| Shewanella amazonensis SB2B | 0.70 | Sama_0514 | | excinuclease ABC, A subunit (RefSeq) | 0.34 | Sama_1940 | | ATP-dependent helicase DinG (RefSeq) | 0.67 | 4 |
| Dyella japonica UNC79MFTsu3.2 | 0.70 | ABZR86_RS00910 | | excinuclease ABC subunit UvrA | 0.42 | ABZR86_RS19750 | | ATP-dependent DNA helicase | low | > 74 |
| Variovorax sp. SCN45 | 0.70 | GFF4944 | | Excinuclease ABC subunit A | 0.36 | GFF986 | | DinG family ATP-dependent helicase YoaA | low | > 127 |
| Shewanella loihica PV-4 | 0.70 | Shew_0533 | | excinuclease ABC, A subunit (RefSeq) | 0.34 | Shew_2196 | | helicase c2 (RefSeq) | 0.79 | 11 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.70 | GFF2755 | | Excinuclease ABC subunit A | 0.32 | GFF4872 | | DinG family ATP-dependent helicase YoaA | low | > 90 |
| Variovorax sp. OAS795 | 0.70 | ABID97_RS04340 | | excinuclease ABC subunit UvrA | 0.36 | ABID97_RS14180 | | ATP-dependent DNA helicase | low | > 91 |
| Rhodanobacter denitrificans FW104-10B01 | 0.69 | LRK54_RS15210 | | excinuclease ABC subunit UvrA | 0.42 | LRK54_RS12765 | | ATP-dependent DNA helicase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.69 | LRK55_RS14925 | | excinuclease ABC subunit UvrA | 0.42 | LRK55_RS12465 | | ATP-dependent DNA helicase | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.69 | OKGIIK_03980 | uvrA | excinuclease ABC subunit UvrA | 0.42 | OKGIIK_02195 | dinG | helicase | low | > 52 |
| Acidovorax sp. GW101-3H11 | 0.69 | Ac3H11_4387 | | Excinuclease ABC subunit A | 0.36 | Ac3H11_2460 | | DinG family ATP-dependent helicase YoaA | low | > 79 |
| Castellaniella sp019104865 MT123 | 0.65 | ABCV34_RS12715 | | excinuclease ABC subunit UvrA | 0.46 | ABCV34_RS01875 | | ATP-dependent DNA helicase | low | > 48 |
| Mycobacterium tuberculosis H37Rv | 0.57 | Rv1638 | | Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA | 0.18 | Rv1329c | | Probable ATP-dependent helicase DinG | low | > 58 |
| Methanococcus maripaludis JJ | 0.54 | MMJJ_RS01235 | | excinuclease ABC subunit UvrA | 0.08 | MMJJ_RS08075 | | ATP-dependent DNA helicase | low | > 28 |
| Methanococcus maripaludis S2 | 0.53 | MMP_RS03815 | | excinuclease ABC subunit UvrA | 0.08 | MMP_RS06275 | | ATP-dependent DNA helicase | low | > 25 |
Not shown: 35 genomes with orthologs for Dsui_1622 only; 1 genomes with orthologs for Dsui_2149 only