Conservation of cofitness between Dsui_1622 and Dsui_0246 in Dechlorosoma suillum PS

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dechlorosoma suillum PS 1.0 Dsui_1622 excinuclease ABC, A subunit 1.0 Dsui_0246 mraZ protein 0.63 20
Ralstonia sp. UNC404CL21Col 0.79 ABZR87_RS07120 excinuclease ABC subunit UvrA 0.41 ABZR87_RS01985 division/cell wall cluster transcriptional repressor MraZ
Ralstonia solanacearum UW163 0.78 UW163_RS02345 excinuclease ABC subunit UvrA 0.40 UW163_RS07305 division/cell wall cluster transcriptional repressor MraZ
Ralstonia solanacearum IBSBF1503 0.78 RALBFv3_RS11235 excinuclease ABC subunit UvrA 0.40 RALBFv3_RS06320 division/cell wall cluster transcriptional repressor MraZ low > 76
Ralstonia solanacearum GMI1000 0.78 RS_RS02080 excinuclease ABC subunit UvrA 0.40 RS_RS14270 division/cell wall cluster transcriptional repressor MraZ
Ralstonia solanacearum PSI07 0.78 RPSI07_RS22065 excinuclease ABC subunit UvrA 0.40 RPSI07_RS10920 division/cell wall cluster transcriptional repressor MraZ low > 81
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS01825 excinuclease ABC subunit UvrA 0.40 QEN71_RS27440 division/cell wall cluster transcriptional repressor MraZ low > 153
Herbaspirillum seropedicae SmR1 0.77 HSERO_RS19810 excinuclease ABC subunit A 0.38 HSERO_RS01620 protein MraZ
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS02970 excinuclease ABC subunit A 0.39 BPHYT_RS17280 transcriptional regulator MraZ
Paraburkholderia bryophila 376MFSha3.1 0.77 H281DRAFT_01913 Excinuclease ABC subunit A 0.39 H281DRAFT_06229 MraZ protein
Paraburkholderia graminis OAS925 0.77 ABIE53_000732 excinuclease ABC subunit A 0.39 ABIE53_003622 MraZ protein low > 113
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS02145 excinuclease ABC subunit A 0.40 RR42_RS18120 cell division protein MraZ low > 128
Pseudomonas stutzeri RCH2 0.75 Psest_3576 excinuclease ABC, A subunit 0.39 Psest_3268 mraZ protein
Pseudomonas putida KT2440 0.75 PP_0483 excinuclease (uvrABC system protein A) 0.39 PP_1328 Protein MraZ
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_06855 ABC-ATPase UvrA 0.40 AO353_15295 division/cell wall cluster transcriptional repressor MraZ low > 101
Pseudomonas sp. S08-1 0.75 OH686_15495 excinuclease ABC subunit A 0.30 OH686_08335 Transcriptional regulator MraZ
Pseudomonas simiae WCS417 0.75 PS417_25395 excinuclease ABC subunit A 0.40 PS417_04595 cell division protein MraZ 0.22 59
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_4520 Excinuclease ABC subunit A 0.41 Psyr_4111 Protein of unknown function UPF0040
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_4520 Excinuclease ABC subunit A 0.41 Psyr_4111 Protein of unknown function UPF0040
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_1283 Excinuclease ABC subunit A 0.40 PfGW456L13_1644 Cell division protein MraZ low > 87
Pseudomonas fluorescens SBW25 0.75 PFLU_RS27025 excinuclease ABC subunit UvrA 0.40 PFLU_RS04660 division/cell wall cluster transcriptional repressor MraZ low > 109
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS27025 excinuclease ABC subunit UvrA 0.40 PFLU_RS04660 division/cell wall cluster transcriptional repressor MraZ low > 109
Pseudomonas sp. RS175 0.75 PFR28_03974 UvrABC system protein A 0.41 PFR28_03596 Transcriptional regulator MraZ low > 88
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_14785 ABC-ATPase UvrA 0.40 AO356_17115 division/cell wall cluster transcriptional repressor MraZ
Pectobacterium carotovorum WPP14 0.73 HER17_RS03550 excinuclease ABC subunit UvrA 0.40 HER17_RS03115 division/cell wall cluster transcriptional repressor MraZ low > 75
Marinobacter adhaerens HP15 0.72 HP15_406 excinuclease ABC, ATPase subunit (A) 0.39 HP15_555 MraZ protein low > 73
Pantoea sp. MT58 0.72 IAI47_17815 excinuclease ABC subunit UvrA 0.38 IAI47_15975 division/cell wall cluster transcriptional repressor MraZ low > 76
Dickeya dianthicola ME23 0.72 DZA65_RS18735 excinuclease ABC subunit UvrA 0.38 DZA65_RS19165 division/cell wall cluster transcriptional repressor MraZ low > 75
Enterobacter asburiae PDN3 0.72 EX28DRAFT_4246 excinuclease ABC, A subunit 0.40 EX28DRAFT_3676 mraZ protein low > 76
Dickeya dianthicola 67-19 0.72 HGI48_RS17610 excinuclease ABC subunit UvrA 0.38 HGI48_RS18020 division/cell wall cluster transcriptional repressor MraZ low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF1429 Excinuclease ABC subunit A 0.40 GFF157 Cell division protein MraZ low > 78
Rahnella sp. WP5 0.72 EX31_RS11990 excinuclease ABC subunit UvrA 0.39 EX31_RS03650 division/cell wall cluster transcriptional repressor MraZ low > 89
Escherichia coli Nissle 1917 0.72 ECOLIN_RS23485 excinuclease ABC subunit UvrA 0.41 ECOLIN_RS00435 division/cell wall cluster transcriptional repressor MraZ low > 52
Dickeya dadantii 3937 0.72 DDA3937_RS17605 excinuclease ABC subunit UvrA 0.38 DDA3937_RS18085 division/cell wall cluster transcriptional repressor MraZ low > 74
Serratia liquefaciens MT49 0.72 IAI46_22905 excinuclease ABC subunit UvrA 0.40 IAI46_03395 division/cell wall cluster transcriptional repressor MraZ low > 86
Escherichia fergusonii Becca 0.72 EFB2_04533 UvrABC system protein A 0.41 EFB2_03966 Transcriptional regulator MraZ low > 86
Escherichia coli ECRC99 0.72 KEDOAH_15255 uvrA excinuclease ABC subunit UvrA 0.41 KEDOAH_17475 mraZ division/cell wall cluster transcriptional repressor MraZ
Escherichia coli ECRC102 0.72 NIAGMN_10740 uvrA excinuclease ABC subunit UvrA 0.41 NIAGMN_08530 mraZ division/cell wall cluster transcriptional repressor MraZ
Escherichia coli ECRC98 0.72 JDDGAC_16530 uvrA excinuclease ABC subunit UvrA 0.41 JDDGAC_14275 mraZ division/cell wall cluster transcriptional repressor MraZ
Enterobacter sp. TBS_079 0.72 MPMX20_00276 UvrABC system protein A 0.40 MPMX20_00774 Transcriptional regulator MraZ low > 85
Escherichia coli ECRC101 0.72 MCAODC_03405 uvrA excinuclease ABC subunit UvrA 0.41 MCAODC_01195 mraZ division/cell wall cluster transcriptional repressor MraZ
Escherichia coli BW25113 0.72 b4058 uvrA excinuclease ABC subunit A (NCBI) 0.41 b0081 mraZ hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_03983 UvrABC system protein A 0.41 OHPLBJKB_03578 Transcriptional regulator MraZ low > 73
Escherichia coli ECOR27 0.72 NOLOHH_05145 uvrA excinuclease ABC subunit UvrA 0.41 NOLOHH_03025 mraZ division/cell wall cluster transcriptional repressor MraZ low > 57
Escherichia coli ECRC62 0.72 BNILDI_06380 uvrA excinuclease ABC subunit UvrA 0.41 BNILDI_08585 mraZ division/cell wall cluster transcriptional repressor MraZ
Escherichia coli ECOR38 0.72 HEPCGN_11510 uvrA excinuclease ABC subunit UvrA 0.41 HEPCGN_08660 mraZ division/cell wall cluster transcriptional repressor MraZ low > 85
Escherichia coli ECRC101 0.72 OKFHMN_12895 uvrA excinuclease ABC subunit UvrA 0.41 OKFHMN_10680 mraZ division/cell wall cluster transcriptional repressor MraZ
Kangiella aquimarina DSM 16071 0.72 B158DRAFT_0885 excinuclease ABC, A subunit 0.38 B158DRAFT_2113 mraZ protein low > 40
Escherichia coli BL21 0.72 ECD_03930 ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC 0.41 ECD_00082 RsmH methytransferase inhibitor low > 60
Klebsiella michiganensis M5al 0.71 BWI76_RS01950 excinuclease ABC subunit A 0.40 BWI76_RS04715 division/cell wall cluster transcriptional repressor MraZ low > 92
Erwinia tracheiphila SCR3 0.71 LU632_RS23685 uvrA excinuclease ABC subunit UvrA 0.38 LU632_RS02905 mraZ division/cell wall cluster transcriptional repressor MraZ
Xanthomonas campestris pv. campestris strain 8004 0.71 Xcc-8004.3830.1 Excinuclease ABC subunit A 0.32 Xcc-8004.4364.1 Cell division protein MraZ low > 74
Shewanella oneidensis MR-1 0.71 SO4030 uvrA excinuclease ABC, A subunit (NCBI ptt file) 0.39 SO4228 conserved hypothetical protein TIGR00242 (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.71 Shewana3_3592 excinuclease ABC subunit A (RefSeq) 0.38 Shewana3_3752 cell division protein MraZ (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.70 MIT1002_00179 Excinuclease ABC subunit A 0.41 MIT1002_03034 cell division protein MraZ low > 70
Shewanella amazonensis SB2B 0.70 Sama_0514 excinuclease ABC, A subunit (RefSeq) 0.39 Sama_0345 cell division protein MraZ (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS00910 excinuclease ABC subunit UvrA 0.32 ABZR86_RS11370 division/cell wall cluster transcriptional repressor MraZ
Variovorax sp. SCN45 0.70 GFF4944 Excinuclease ABC subunit A 0.40 GFF4482 Transcriptional regulator MraZ low > 127
Shewanella loihica PV-4 0.70 Shew_0533 excinuclease ABC, A subunit (RefSeq) 0.38 Shew_3462 cell division protein MraZ (RefSeq)
Variovorax sp. OAS795 0.70 ABID97_RS04340 excinuclease ABC subunit UvrA 0.40 ABID97_RS06190 division/cell wall cluster transcriptional repressor MraZ 0.45 27
Hydrogenophaga sp. GW460-11-11-14-LB1 0.70 GFF2755 Excinuclease ABC subunit A 0.28 GFF554 Cell division protein MraZ low > 90
Rhodanobacter denitrificans FW104-10B01 0.69 LRK54_RS15210 excinuclease ABC subunit UvrA 0.34 LRK54_RS12200 division/cell wall cluster transcriptional repressor MraZ low > 59
Rhodanobacter denitrificans MT42 0.69 LRK55_RS14925 excinuclease ABC subunit UvrA 0.34 LRK55_RS11935 division/cell wall cluster transcriptional repressor MraZ low > 63
Rhodanobacter sp. FW510-T8 0.69 OKGIIK_03980 uvrA excinuclease ABC subunit UvrA 0.34 OKGIIK_11725 mraZ division/cell wall cluster transcriptional repressor MraZ low > 52
Castellaniella sp019104865 MT123 0.65 ABCV34_RS12715 excinuclease ABC subunit UvrA 0.36 ABCV34_RS09690 division/cell wall cluster transcriptional repressor MraZ
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02673 excinuclease ABC subunit A 0.18 CCNA_02646 cell division protein MraZ low > 67
Caulobacter crescentus NA1000 0.61 CCNA_02673 excinuclease ABC subunit A 0.18 CCNA_02646 cell division protein MraZ low > 66
Dinoroseobacter shibae DFL-12 0.61 Dshi_1809 excinuclease ABC, A subunit (RefSeq) 0.19 Dshi_2475 protein of unknown function UPF0040 (RefSeq) low > 64
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS08575 excinuclease ABC subunit UvrA 0.19 A4249_RS01480 cell division protein MraZ low > 48
Magnetospirillum magneticum AMB-1 0.60 AMB_RS12410 excinuclease ABC subunit UvrA 0.17 AMB_RS19430 transcriptional regulator MraZ
Bosea sp. OAE506 0.60 ABIE41_RS15100 excinuclease ABC subunit UvrA 0.18 ABIE41_RS12555 division/cell wall cluster transcriptional repressor MraZ low > 77
Mycobacterium tuberculosis H37Rv 0.57 Rv1638 Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA 0.25 Rv2166c Conserved protein
Echinicola vietnamensis KMM 6221, DSM 17526 0.52 Echvi_1138 excinuclease ABC, A subunit 0.26 Echvi_0318 mraZ protein low > 79
Bacteroides stercoris CC31F 0.50 HMPREF1181_RS15185 excinuclease ABC subunit UvrA 0.23 HMPREF1181_RS02785 division/cell wall cluster transcriptional repressor MraZ
Mucilaginibacter yixingensis YX-36 DSM 26809 0.50 ABZR88_RS18670 excinuclease ABC subunit UvrA 0.17 ABZR88_RS03860 division/cell wall cluster transcriptional repressor MraZ
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU1987 uvrA excinuclease ABC, A subunit (TIGR) 0.24 DVU2513 mraZ conserved hypothetical protein TIGR00242 (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.47 DvMF_3050 excinuclease ABC, A subunit (RefSeq) 0.23 DvMF_0964 cell division protein MraZ (RefSeq) low > 51

Not shown: 26 genomes with orthologs for Dsui_1622 only; 1 genomes with orthologs for Dsui_0246 only