Conservation of cofitness between CSW01_06750 and CSW01_12680 in Vibrio cholerae E7946 ATCC 55056

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06750 2-methylaconitate cis-trans isomerase PrpF 1.0 CSW01_12680 cytosol aminopeptidase 0.65 7
Ralstonia solanacearum GMI1000 0.73 RS_RS17725 2-methylaconitate cis-trans isomerase PrpF 0.47 RS_RS12120 cytosol aminopeptidase low > 80
Paraburkholderia graminis OAS925 0.72 ABIE53_005044 putative AcnD-accessory protein PrpF 0.51 ABIE53_001235 leucyl aminopeptidase low > 113
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS16730 2-methylaconitate cis-trans isomerase PrpF 0.50 ABZR87_RS00150 leucyl aminopeptidase low > 80
Ralstonia solanacearum PSI07 0.72 RPSI07_RS00385 2-methylaconitate cis-trans isomerase PrpF 0.49 RPSI07_RS12825 leucyl aminopeptidase low > 81
Cupriavidus basilensis FW507-4G11 0.72 RR42_RS11275 3-methylitaconate isomerase 0.48 RR42_RS16225 cytosol aminopeptidase low > 128
Pseudomonas sp. SVBP6 0.72 COO64_RS09915 prpF 2-methylaconitate cis-trans isomerase PrpF 0.51 COO64_RS04415 leucyl aminopeptidase low > 93
Dyella japonica UNC79MFTsu3.2 0.72 ABZR86_RS08430 2-methylaconitate cis-trans isomerase PrpF 0.42 ABZR86_RS19105 leucyl aminopeptidase low > 74
Pseudomonas fluorescens SBW25 0.71 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.54 PFLU_RS05235 leucyl aminopeptidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF 0.54 PFLU_RS05235 leucyl aminopeptidase 0.17 78
Pseudomonas sp. S08-1 0.71 OH686_01675 probable AcnD-accessory protein PrpF 0.52 OH686_07810 Cytosol aminopeptidase PepA — —
Pseudomonas stutzeri RCH2 0.71 Psest_2318 probable AcnD-accessory protein PrpF 0.51 Psest_1235 Leucyl aminopeptidase — —
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS31055 2-methylaconitate cis-trans isomerase PrpF 0.51 QEN71_RS25205 leucyl aminopeptidase low > 153
Shewanella loihica PV-4 0.71 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) 0.81 Shew_0939 leucyl aminopeptidase (RefSeq) low > 60
Ralstonia solanacearum UW163 0.71 UW163_RS23455 2-methylaconitate cis-trans isomerase PrpF 0.48 UW163_RS09120 leucyl aminopeptidase — —
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS22835 2-methylaconitate cis-trans isomerase PrpF 0.48 RALBFv3_RS04550 leucyl aminopeptidase low > 76
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_02982 2-methylaconitate cis-trans isomerase 0.51 H281DRAFT_00123 aminopeptidase A. Metallo peptidase. MEROPS family M17 low > 103
Pseudomonas simiae WCS417 0.71 PS417_21065 3-methylitaconate isomerase 0.54 PS417_05165 cytosol aminopeptidase 0.18 58
Pseudomonas sp. DMC3 0.71 GFF5233 2-methyl-aconitate isomerase 0.54 GFF1952 Cytosol aminopeptidase low > 89
Pseudomonas putida KT2440 0.70 PP_2337 aconitate isomerase 0.52 PP_0980 Probable cytosol aminopeptidase low > 96
Pseudomonas orientalis W4I3 0.70 QF045_RS22890 2-methylaconitate cis-trans isomerase PrpF 0.54 QF045_RS08155 leucyl aminopeptidase low > 93
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_3822 2-methylaconitate cis-trans isomerase 0.54 Pf1N1B4_898 Cytosol aminopeptidase PepA (EC 3.4.11.1) — —
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_2088 2-methylaconitate cis-trans isomerase 0.54 Psyr_1091 aminopeptidase A, Metallo peptidase, MEROPS family M17 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_2088 2-methylaconitate cis-trans isomerase 0.54 Psyr_1091 aminopeptidase A, Metallo peptidase, MEROPS family M17 low > 86
Shewanella sp. ANA-3 0.70 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) 0.81 Shewana3_3006 leucyl aminopeptidase (RefSeq) 0.60 28
Lysobacter sp. OAE881 0.70 ABIE51_RS09485 2-methylaconitate cis-trans isomerase PrpF 0.46 ABIE51_RS04475 leucyl aminopeptidase — —
Pseudomonas sp. BP01 0.70 JOY50_RS25735 prpF 2-methylaconitate cis-trans isomerase PrpF 0.52 JOY50_RS11265 leucyl aminopeptidase low > 84
Pseudomonas lactucae CFBP13502 0.70 GEMAOFIL_04358 2-methyl-aconitate isomerase 0.54 GEMAOFIL_01239 Cytosol aminopeptidase low > 96
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_4115 2-methylaconitate cis-trans isomerase 0.54 PfGW456L13_4846 Cytosol aminopeptidase PepA (EC 3.4.11.1) 0.35 38
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS30140 3-methylitaconate isomerase 0.51 BPHYT_RS04795 cytosol aminopeptidase low > 109
Pseudomonas segetis P6 0.70 ACVTMO_RS13025 prpF 2-methylaconitate cis-trans isomerase PrpF 0.53 ACVTMO_RS17395 leucyl aminopeptidase — —
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_1346 2-methylaconitate cis-trans isomerase 0.60 B158DRAFT_1167 Leucyl aminopeptidase low > 40
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_00885 3-methylitaconate isomerase 0.54 AO353_04535 aminopeptidase low > 101
Acinetobacter baumannii LAC-4 0.70 RR41_RS03720 2-methylaconitate cis-trans isomerase PrpF 0.38 RR41_RS17825 leucyl aminopeptidase low > 55
Shewanella oneidensis MR-1 0.70 SO0342 conserved hypothetical protein (NCBI ptt file) 0.81 SO1368 pepA-2 cytosol aminopeptidase (NCBI ptt file) low > 76
Variovorax sp. SCN45 0.70 GFF269 2-methylaconitate isomerase 0.36 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 127
Pseudomonas sp. RS175 0.69 PFR28_02924 2-methyl-aconitate isomerase 0.53 PFR28_03528 Cytosol aminopeptidase 0.33 59
Xanthomonas campestris pv. campestris strain 8004 0.69 Xcc-8004.3976.1 2-methylaconitate cis-trans isomerase 0.44 Xcc-8004.4446.1 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 74
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_6064 2-methylaconitate isomerase 0.54 Pf6N2E2_5420 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 103
Marinobacter adhaerens HP15 0.69 HP15_1929 AcnD-accessory protein PrpF 0.46 HP15_1315 leucyl aminopeptidase — —
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_20880 3-methylitaconate isomerase 0.54 AO356_17470 aminopeptidase 0.26 51
Alteromonas macleodii MIT1002 0.68 MIT1002_03132 3-methylitaconate isomerase 0.79 MIT1002_03197 Cytosol aminopeptidase — —
Herbaspirillum seropedicae SmR1 0.68 HSERO_RS11420 3-methylitaconate isomerase 0.46 HSERO_RS15600 cytosol aminopeptidase — —
Acidovorax sp. GW101-3H11 0.68 Ac3H11_2325 2-methylaconitate cis-trans isomerase 0.36 Ac3H11_2399 Cytosol aminopeptidase PepA (EC 3.4.11.1) — —
Pseudomonas aeruginosa PA14 0.67 IKLFDK_03430 2-methylaconitate cis-trans isomerase PrpF 0.51 IKLFDK_19730 leucyl aminopeptidase low > 98
Pseudomonas aeruginosa PUPa3 0.67 DQ20_RS44320 prpF;go_process=propionate 2-methylaconitate cis-trans isomerase PrpF 0.52 DQ20_RS49000 leucyl aminopeptidase low > 101
Shewanella amazonensis SB2B 0.67 Sama_3297 hypothetical protein (RefSeq) 0.81 Sama_0795 leucyl aminopeptidase (RefSeq) low > 62
Pseudomonas aeruginosa MRSN321 0.67 DY961_RS08530 prpF;go_process=propionate 2-methylaconitate cis-trans isomerase PrpF 0.52 DY961_RS13735 leucyl aminopeptidase low > 100
Azospirillum brasilense Sp245 0.64 AZOBR_RS24310 3-methylitaconate isomerase 0.29 AZOBR_RS16385 aminopeptidase A — —
Variovorax sp. OAS795 0.54 ABID97_RS19020 2-methylaconitate cis-trans isomerase PrpF 0.37 ABID97_RS16580 leucyl aminopeptidase 0.27 28
Xanthobacter sp. DMC5 0.29 GFF2766 3-methylitaconate isomerase 0.28 GFF142 Cytosol aminopeptidase — —
Rahnella sp. WP5 0.27 EX31_RS10210 4-oxalomesaconate tautomerase 0.83 EX31_RS04385 leucyl aminopeptidase low > 89
Klebsiella michiganensis M5al 0.24 BWI76_RS14180 hypothetical protein 0.81 BWI76_RS03040 leucyl aminopeptidase low > 92
Erwinia amylovora T8 0.23 OLJFJH_13345 4-oxalomesaconate tautomerase 0.84 OLJFJH_07380 leucyl aminopeptidase low > 58
Sinorhizobium meliloti 1021 0.22 SMc00497 tramsmembrane protein 0.28 SMc00585 leucyl aminopeptidase low > 103
Klebsiella pneumoniae MKP103 0.22 KDGMDA_08375 4-oxalomesaconate tautomerase 0.81 KDGMDA_11530 leucyl aminopeptidase low > 95
Bosea sp. OAE506 0.22 ABIE41_RS16535 4-oxalomesaconate tautomerase 0.27 ABIE41_RS17710 leucyl aminopeptidase low > 77
Azospirillum sp. SherDot2 0.22 MPMX19_03556 Putative isomerase YbhH 0.27 MPMX19_01593 Cytosol aminopeptidase low > 112
Magnetospirillum magneticum AMB-1 0.21 AMB_RS01270 4-oxalomesaconate tautomerase 0.32 AMB_RS18600 leucyl aminopeptidase — —
Castellaniella sp019104865 MT123 0.21 ABCV34_RS02795 4-oxalomesaconate tautomerase 0.43 ABCV34_RS08295 leucyl aminopeptidase — —
Rhodopseudomonas palustris CGA009 0.21 TX73_024400 4-oxalomesaconate tautomerase 0.25 TX73_015830 leucyl aminopeptidase low > 86
Escherichia coli BW25113 0.20 b0769 ybhH hypothetical protein (NCBI) 0.82 b4260 pepA leucyl aminopeptidase (NCBI) low > 76
Escherichia fergusonii Becca 0.20 EFB2_03337 Putative isomerase YbhH 0.82 EFB2_04275 Cytosol aminopeptidase low > 86
Escherichia coli Nissle 1917 0.20 ECOLIN_RS04095 4-oxalomesaconate tautomerase 0.82 ECOLIN_RS24695 leucyl aminopeptidase — —
Escherichia coli ECRC62 0.20 BNILDI_21090 ybhH 4-oxalomesaconate tautomerase 0.82 BNILDI_07455 pepA leucyl aminopeptidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_02944 4-oxalomesaconate tautomerase 0.82 OHPLBJKB_03776 Cytosol aminopeptidase low > 74
Escherichia coli ECRC101 0.20 MCAODC_25885 ybhH 4-oxalomesaconate tautomerase 0.82 MCAODC_02295 pepA leucyl aminopeptidase low > 87
Escherichia coli ECOR27 0.20 NOLOHH_23095 ybhH 4-oxalomesaconate tautomerase 0.82 NOLOHH_04055 pepA leucyl aminopeptidase low > 76
Escherichia coli ECRC98 0.20 JDDGAC_10320 ybhH 4-oxalomesaconate tautomerase 0.82 JDDGAC_15430 pepA leucyl aminopeptidase low > 87
Escherichia coli ECRC99 0.20 KEDOAH_21300 ybhH 4-oxalomesaconate tautomerase 0.82 KEDOAH_16360 pepA leucyl aminopeptidase — —
Escherichia coli ECRC102 0.20 NIAGMN_04715 ybhH 4-oxalomesaconate tautomerase 0.82 NIAGMN_09640 pepA leucyl aminopeptidase low > 80
Escherichia coli ECRC100 0.20 OKFHMN_06665 ybhH 4-oxalomesaconate tautomerase 0.82 OKFHMN_11790 pepA leucyl aminopeptidase low > 79
Dickeya dadantii 3937 0.19 DDA3937_RS07810 4-oxalomesaconate tautomerase 0.83 DDA3937_RS01995 leucyl aminopeptidase low > 74

Not shown: 4 genomes with orthologs for CSW01_06750 only; 30 genomes with orthologs for CSW01_12680 only