| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_02015 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 1.0 | CSW01_11870 | | DNA repair protein RadA | 0.69 | 8 |
| Alteromonas macleodii MIT1002 | 0.79 | MIT1002_03379 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.74 | MIT1002_02706 | | Lon protease 2 | — | — |
| Shewanella amazonensis SB2B | 0.75 | Sama_2838 | | sulfite reductase subunit beta (RefSeq) | 0.73 | Sama_0981 | | DNA repair protein RadA (RefSeq) | low | > 62 |
| Serratia liquefaciens MT49 | 0.75 | IAI46_03690 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.79 | IAI46_02945 | | DNA repair protein RadA | low | > 86 |
| Pantoea sp. MT58 | 0.75 | IAI47_04155 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.80 | IAI47_16345 | | DNA repair protein RadA | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.75 | PagCFBP13505_RS16810 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.80 | PagCFBP13505_RS21755 | | DNA repair protein RadA | low | > 74 |
| Rahnella sp. WP5 | 0.75 | EX31_RS07900 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.81 | EX31_RS04030 | | DNA repair protein RadA | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.74 | HER17_RS04240 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.77 | HER17_RS19085 | | DNA repair protein RadA | low | > 75 |
| Dickeya dadantii 3937 | 0.74 | DDA3937_RS16940 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.76 | DDA3937_RS02420 | | DNA repair protein RadA | low | > 74 |
| Dickeya dianthicola ME23 | 0.74 | DZA65_RS18085 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.76 | DZA65_RS02485 | | DNA repair protein RadA | low | > 75 |
| Klebsiella pneumoniae MKP103 | 0.74 | KDGMDA_03295 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.82 | KDGMDA_12435 | | DNA repair protein RadA | low | > 95 |
| Enterobacter sp. TBS_079 | 0.74 | MPMX20_03642 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.81 | MPMX20_00694 | | DNA repair protein RadA | low | > 85 |
| Erwinia tracheiphila HP pepo 2.2 | 0.74 | IJEDHG_17425 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.80 | IJEDHG_06365 | radA | DNA repair protein RadA | low | > 61 |
| Dickeya dianthicola 67-19 | 0.74 | HGI48_RS17010 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.76 | HGI48_RS02380 | | DNA repair protein RadA | low | > 71 |
| Enterobacter asburiae PDN3 | 0.73 | EX28DRAFT_2852 | | sulfite reductase (NADPH) hemoprotein, beta-component | 0.81 | EX28DRAFT_3597 | | DNA repair protein RadA | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.73 | LU632_RS06405 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.80 | LU632_RS02550 | radA | DNA repair protein RadA | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.73 | GFF4819 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.82 | GFF1057 | | DNA repair protein RadA | low | > 78 |
| Klebsiella michiganensis M5al | 0.73 | BWI76_RS22760 | | sulfite reductase subunit beta | 0.82 | BWI76_RS04165 | | DNA repair protein RadA | low | > 92 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.73 | OHPLBJKB_00970 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.83 | OHPLBJKB_03672 | | DNA repair protein RadA | low | > 74 |
| Escherichia coli Nissle 1917 | 0.73 | ECOLIN_RS15405 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.83 | ECOLIN_RS25190 | | DNA repair protein RadA | low | > 55 |
| Escherichia fergusonii Becca | 0.72 | EFB2_01154 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.83 | EFB2_04057 | | DNA repair protein RadA | low | > 86 |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_12190 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.82 | NOLOHH_03520 | radA | DNA repair protein RadA | low | > 76 |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_24040 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.82 | JDDGAC_14790 | radA | DNA repair protein RadA | low | > 87 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_10740 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.82 | BNILDI_08075 | radA | DNA repair protein RadA | low | > 75 |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_18145 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.82 | NIAGMN_09045 | radA | DNA repair protein RadA | low | > 80 |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_07750 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.82 | KEDOAH_16960 | radA | DNA repair protein RadA | — | — |
| Escherichia coli ECRC101 | 0.72 | MCAODC_10900 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.82 | MCAODC_01710 | radA | DNA repair protein RadA | low | > 88 |
| Escherichia coli ECRC100 | 0.72 | OKFHMN_20375 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.82 | OKFHMN_11195 | radA | DNA repair protein RadA | low | > 79 |
| Escherichia coli BW25113 | 0.72 | b2763 | cysI | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) | 0.83 | b4389 | radA | predicted repair protein (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.72 | ECD_02608 | | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding | 0.83 | ECD_04265 | | DNA repair protein | low | > 61 |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_19090 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.83 | HEPCGN_09195 | radA | DNA repair protein RadA | low | > 88 |
| Erwinia amylovora T8 | 0.72 | OLJFJH_09305 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.81 | OLJFJH_01590 | | DNA repair protein RadA | low | > 58 |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_0856 | | sulfite reductase subunit beta (RefSeq) | 0.74 | Shewana3_1049 | | DNA repair protein RadA (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.58 | SO3737 | cysI | sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) | 0.74 | SO1226 | radA | DNA repair protein RadA (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.58 | Shew_0666 | | sulfite reductase subunit beta (RefSeq) | 0.40 | Shew_2807 | | DNA repair protein RadA (RefSeq) | low | > 60 |
| Rhodanobacter sp000427505 FW510-R12 | 0.49 | LRK53_RS09185 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.59 | LRK53_RS07420 | | DNA repair protein RadA | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.48 | ABZR86_RS05900 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.57 | ABZR86_RS08845 | | DNA repair protein RadA | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.48 | B158DRAFT_2161 | | sulfite reductase (NADPH) beta subunit (EC 1.8.1.2) | 0.59 | B158DRAFT_0877 | | DNA replication and repair protein RadA | low | > 40 |
| Lysobacter sp. OAE881 | 0.48 | ABIE51_RS15830 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.57 | ABIE51_RS07685 | | DNA repair protein RadA | low | > 62 |
| Rhodanobacter sp. FW510-T8 | 0.47 | OKGIIK_05965 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.59 | OKGIIK_09580 | radA | DNA repair protein RadA | low | > 53 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.1257.1 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.59 | Xcc-8004.3812.1 | | DNA repair protein RadA | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.46 | LRK54_RS00925 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.58 | LRK54_RS02525 | | DNA repair protein RadA | low | > 59 |
| Castellaniella sp019104865 MT123 | 0.44 | ABCV34_RS00215 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.51 | ABCV34_RS02345 | | DNA repair protein RadA | low | > 48 |
| Synechocystis sp000284455 PCC 6803 | 0.31 | SGL_RS03380 | | sulfite reductase, ferredoxin dependent | 0.42 | SGL_RS11815 | | DNA repair protein RadA | low | > 52 |
| Synechococcus elongatus PCC 7942 | 0.30 | Synpcc7942_0019 | sir | Sulfite reductase, ferredoxin dependent | 0.41 | Synpcc7942_1452 | radA | DNA repair protein RadA | — | — |
| Mycobacterium tuberculosis H37Rv | 0.11 | Rv2391 | | Ferredoxin-dependent sulfite reductase SirA | 0.33 | Rv3585 | | DNA repair protein RadA (DNA repair protein SMS) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.09 | HSERO_RS15550 | | sulfite reductase | 0.52 | HSERO_RS10745 | | DNA repair protein RadA | low | > 78 |
| Sphingobium sp. HT1-2 | 0.09 | GFF1452 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.41 | GFF1895 | | DNA repair protein RadA | — | — |
| Rhodospirillum rubrum S1H | 0.09 | Rru_A1931 | | Ferredoxin--nitrite reductase (NCBI) | 0.39 | Rru_A0406 | | DNA repair protein RadA (NCBI) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.08 | TX73_019220 | | NirA family protein | 0.41 | TX73_015980 | | DNA repair protein RadA | low | > 86 |
| Caulobacter crescentus NA1000 Δfur | 0.08 | CCNA_01177 | | sulfite reductase, beta subunit | 0.40 | CCNA_01732 | | DNA repair protein RadA | low | > 67 |
| Caulobacter crescentus NA1000 | 0.08 | CCNA_01177 | | sulfite reductase, beta subunit | 0.40 | CCNA_01732 | | DNA repair protein RadA | low | > 66 |
| Dinoroseobacter shibae DFL-12 | 0.08 | Dshi_1153 | | nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein (RefSeq) | 0.41 | Dshi_2129 | | DNA repair protein RadA (RefSeq) | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.08 | RALBFv3_RS04600 | | sulfite reductase | 0.52 | RALBFv3_RS00210 | | DNA repair protein RadA | low | > 76 |
| Ralstonia solanacearum UW163 | 0.08 | UW163_RS09070 | | sulfite reductase | 0.52 | UW163_RS13540 | | DNA repair protein RadA | — | — |
| Ralstonia sp. UNC404CL21Col | 0.08 | ABZR87_RS00210 | | nitrite/sulfite reductase | 0.53 | ABZR87_RS11670 | | DNA repair protein RadA | low | > 80 |
| Azospirillum sp. SherDot2 | 0.08 | MPMX19_00652 | | Sulfite reductase [ferredoxin] | 0.41 | MPMX19_00904 | | DNA repair protein RadA | low | > 112 |
| Ralstonia solanacearum PSI07 | 0.08 | RPSI07_RS12775 | | nitrite/sulfite reductase | 0.52 | RPSI07_RS17270 | | DNA repair protein RadA | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.08 | RS_RS12170 | | nitrite/sulfite reductase | 0.52 | RS_RS06880 | | DNA repair protein RadA | low | > 80 |
| Sphingomonas koreensis DSMZ 15582 | 0.08 | Ga0059261_1498 | | Sulfite reductase, beta subunit (hemoprotein) | 0.38 | Ga0059261_0751 | | DNA repair protein RadA | low | > 68 |
| Phaeobacter inhibens DSM 17395 | 0.07 | PGA1_c20760 | | putative nitrite/sulfite reductase | 0.41 | PGA1_c10840 | | DNA repair protein RadA | — | — |
| Sinorhizobium meliloti 1021 | 0.07 | SMc02124 | | nitrite reductase | 0.41 | SMc00556 | | DNA repair protein RadA | low | > 103 |
| Pseudomonas sp. SVBP6 | 0.07 | COO64_RS13825 | | nitrite/sulfite reductase | 0.62 | COO64_RS02920 | radA | DNA repair protein RadA | low | > 93 |
| Agrobacterium fabrum C58 | 0.07 | Atu1456 | | sulfite reductase (NADPH) hemoprotein beta-component | 0.40 | Atu1077 | | DNA repair protein | low | > 89 |
| Pseudomonas sp. BP01 | 0.07 | JOY50_RS02185 | | DUF2849 domain-containing protein | 0.62 | JOY50_RS15685 | radA | DNA repair protein RadA | low | > 84 |
| Paraburkholderia graminis OAS925 | 0.06 | ABIE53_001226 | | sulfite reductase (NADPH) hemoprotein beta-component | 0.53 | ABIE53_002526 | | DNA repair protein RadA/Sms | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.06 | H281DRAFT_00114 | | sulfite reductase (NADPH) beta subunit | 0.52 | H281DRAFT_00590 | | DNA replication and repair protein RadA | low | > 103 |
| Pseudomonas aeruginosa PA14 | 0.06 | IKLFDK_21270 | | sulfite reductase | 0.64 | IKLFDK_00465 | | DNA repair protein RadA | low | > 100 |
| Acinetobacter baumannii LAC-4 | 0.06 | RR41_RS03245 | | nitrite/sulfite reductase | 0.58 | RR41_RS04415 | | DNA repair protein RadA | low | > 55 |
Not shown: 0 genomes with orthologs for CSW01_02015 only; 50 genomes with orthologs for CSW01_11870 only