Conservation of cofitness between CSW01_11205 and CSW01_10675 in Vibrio cholerae E7946 ATCC 55056

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11205 flagellar basal-body rod protein FlgF 1.0 CSW01_10675 flagellar protein FliS 0.92 18
Shewanella loihica PV-4 0.60 Shew_1349 flgF flagellar basal body rod protein FlgF (RefSeq) 0.52 Shew_1361 fliS flagellar protein FliS (RefSeq) 0.98 6
Shewanella amazonensis SB2B 0.57 Sama_2314 flgF flagellar basal body rod protein FlgF (RefSeq) 0.54 Sama_2302 fliS flagellar protein FliS (RefSeq) 0.93 33
Shewanella oneidensis MR-1 0.57 SO3245 flgF flagellar basal-body rod protein FlgF (NCBI ptt file) 0.52 SO3233 fliS flagellar protein FliS (NCBI ptt file) 0.79 31
Shewanella sp. ANA-3 0.56 Shewana3_1325 flgF flagellar basal body rod protein FlgF (RefSeq) 0.52 Shewana3_1337 fliS flagellar protein FliS (RefSeq) 0.82 32
Alteromonas macleodii MIT1002 0.51 MIT1002_01043 Putative proximal rod protein 0.32 MIT1002_01057 Flagellar protein FliS low > 70
Pseudomonas stutzeri RCH2 0.47 Psest_2964 flagellar basal-body rod protein FlgF 0.40 Psest_2504 flagellar biosynthetic protein FliS 0.56 46
Marinobacter adhaerens HP15 0.47 HP15_1471 flagellar basal-body rod FlgF 0.39 HP15_2368 flagellar protein FliS low > 73
Pseudomonas putida KT2440 0.47 PP_4386 flagellar basal-body rod protein FlgF 0.40 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.78 24
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 0.35 Psyr_3463 Flagellar protein FliS low > 86
Pseudomonas aeruginosa PA14 0.47 IKLFDK_04965 flagellar basal-body rod protein FlgF 0.38 IKLFDK_05035 flagellar protein FliS 0.75 15
Pseudomonas sp. BP01 0.47 JOY50_RS00770 flagellar basal body rod protein FlgF 0.36 JOY50_RS00715 fliS flagellar export chaperone FliS 0.73 26
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 0.35 Psyr_3463 Flagellar protein FliS 0.44 26
Pseudomonas sp. S08-1 0.46 OH686_02955 Flagellar basal-body rod protein FlgF 0.43 OH686_02865 flagellar protein FliS low > 80
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_3568 Flagellar basal-body rod protein FlgF 0.35 Pf1N1B4_3597 Flagellar biosynthesis protein FliS — —
Pseudomonas sp. SVBP6 0.46 COO64_RS21375 flagellar basal body rod protein FlgF 0.37 COO64_RS21310 fliS flagellar export chaperone FliS low > 93
Pseudomonas lactucae CFBP13502 0.45 GEMAOFIL_04176 Flagellar basal-body rod protein FlgF 0.38 GEMAOFIL_04165 Flagellar secretion chaperone FliS low > 93
Pseudomonas simiae WCS417 0.45 PS417_19890 flagellar basal body rod protein FlgF 0.38 PS417_19835 flagellar biosynthesis protein FliS — —
Pseudomonas sp. RS175 0.45 PFR28_00804 Flagellar basal-body rod protein FlgF 0.40 PFR28_00826 Flagellar secretion chaperone FliS 0.89 18
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS21860 flagellar basal body rod protein FlgF 0.38 PFLU_RS21805 flagellar export chaperone FliS 0.81 29
Pseudomonas fluorescens SBW25 0.45 PFLU_RS21860 flagellar basal body rod protein FlgF 0.38 PFLU_RS21805 flagellar export chaperone FliS 0.60 71
Pseudomonas segetis P6 0.45 MPMX49_03163 Flagellar basal-body rod protein FlgF 0.40 MPMX49_03152 Flagellar secretion chaperone FliS 0.50 75
Pseudomonas sp. DMC3 0.45 GFF2416 Flagellar basal-body rod protein FlgF 0.37 GFF2443 Flagellar secretion chaperone FliS low > 89
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_18595 flagellar biosynthesis protein FlgF 0.40 AO353_18650 flagellar export chaperone FliS 0.75 13
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2628 Flagellar basal-body rod protein FlgF 0.39 Pf6N2E2_2599 Flagellar biosynthesis protein FliS 0.76 31
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_03930 flagellar biosynthesis protein FlgF 0.37 AO356_03865 flagellar export chaperone FliS 0.84 27
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS10200 flagellar basal body rod protein FlgF 0.38 HSERO_RS10340 flagellar biosynthesis protein FliS 0.62 53
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.2782.1 Flagellar basal-body rod protein FlgF 0.37 Xcc-8004.2793.1 Flagellar biosynthesis protein FliS low > 74
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS18875 flagellar basal body rod protein FlgF 0.35 BPHYT_RS18765 flagellar biosynthesis protein FliS 0.35 71
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_05766 flagellar basal-body rod protein FlgF 0.34 H281DRAFT_05788 flagellar protein FliS low > 103
Paraburkholderia graminis OAS925 0.35 ABIE53_000097 flagellar basal-body rod protein FlgF 0.33 ABIE53_000072 flagellar protein FliS 0.65 50
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS35705 flagellar basal body rod protein FlgF 0.31 RR42_RS23640 flagellar biosynthesis protein FliS low > 128
Enterobacter sp. TBS_079 0.35 MPMX20_01756 Flagellar basal-body rod protein FlgF 0.37 MPMX20_02856 Flagellar secretion chaperone FliS 0.60 50
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS28900 flagellar basal-body rod protein FlgF 0.33 QEN71_RS28785 flagellar export chaperone FliS 0.86 43
Enterobacter asburiae PDN3 0.35 EX28DRAFT_1855 flagellar hook-basal body protein 0.30 EX28DRAFT_0621 flagellar biosynthetic protein FliS low > 76
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS20095 flagellar basal-body rod protein FlgF 0.32 ABZR86_RS20140 flagellar export chaperone FliS low > 74
Escherichia coli ECRC100 0.34 OKFHMN_03655 flgF flagellar basal-body rod protein FlgF 0.27 OKFHMN_25765 fliS flagellar export chaperone FliS low > 79
Escherichia coli ECRC102 0.34 NIAGMN_24175 flgF flagellar basal-body rod protein FlgF 0.27 NIAGMN_02285 fliS flagellar export chaperone FliS low > 80
Escherichia coli ECRC99 0.34 KEDOAH_24100 flgF flagellar basal-body rod protein FlgF 0.27 KEDOAH_02325 fliS flagellar export chaperone FliS — —
Escherichia coli ECRC62 0.34 BNILDI_19345 flgF flagellar basal-body rod protein FlgF 0.27 BNILDI_15175 fliS flagellar export chaperone FliS 0.57 14
Escherichia coli ECRC101 0.34 MCAODC_23015 flgF flagellar basal-body rod protein FlgF 0.27 MCAODC_19625 fliS flagellar export chaperone FliS low > 88
Escherichia coli ECOR27 0.34 NOLOHH_21185 flgF flagellar basal-body rod protein FlgF 0.27 NOLOHH_16385 fliS flagellar export chaperone FliS low > 76
Escherichia coli BW25113 0.34 b1077 flgF flagellar component of cell-proximal portion of basal-body rod (NCBI) 0.27 b1925 fliS flagellar protein FliS (NCBI) 0.51 25
Escherichia coli ECRC98 0.34 JDDGAC_07315 flgF flagellar basal-body rod protein FlgF 0.27 JDDGAC_00355 fliS flagellar export chaperone FliS low > 87
Escherichia coli Nissle 1917 0.34 ECOLIN_RS06235 flagellar basal-body rod protein FlgF 0.27 ECOLIN_RS10990 flagellar export chaperone FliS — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF4076 Flagellar basal-body rod protein FlgF 0.31 GFF1447 Flagellar biosynthesis protein FliS low > 90
Escherichia fergusonii Becca 0.34 EFB2_02897 Flagellar basal-body rod protein FlgF 0.27 EFB2_02020 Flagellar secretion chaperone FliS low > 86
Rhodanobacter denitrificans MT42 0.34 LRK55_RS13165 flagellar basal-body rod protein FlgF 0.33 LRK55_RS13210 flagellar export chaperone FliS low > 63
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS13425 flagellar basal-body rod protein FlgF 0.32 LRK54_RS13470 flagellar export chaperone FliS 0.31 30
Escherichia coli ECOR38 0.34 HEPCGN_23835 flgF flagellar basal-body rod protein FlgF 0.27 HEPCGN_04120 fliS flagellar export chaperone FliS low > 88
Serratia liquefaciens MT49 0.34 IAI46_15940 flagellar basal body rod protein FlgF 0.38 IAI46_15800 flagellar export chaperone FliS low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3358 Flagellar basal-body rod protein FlgF 0.39 GFF4027 Flagellar biosynthesis protein FliS low > 78
Rhodanobacter sp000427505 FW510-R12 0.33 LRK53_RS15155 flagellar basal-body rod protein FlgF 0.32 LRK53_RS15105 flagellar export chaperone FliS low > 59
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_02670 flgF flagellar basal-body rod protein FlgF 0.32 OKGIIK_02720 fliS flagellar export chaperone FliS low > 52
Lysobacter sp. OAE881 0.33 ABIE51_RS16690 flagellar basal body rod protein FlgF 0.29 ABIE51_RS16735 flagellar export chaperone FliS low > 62
Pantoea agglomerans CFBP13505 P0401 0.32 PagCFBP13505_RS05190 flagellar basal body rod protein FlgF 0.29 PagCFBP13505_RS02025 flagellar export chaperone FliS low > 74
Pectobacterium carotovorum WPP14 0.32 HER17_RS08185 flagellar basal body rod protein FlgF 0.35 HER17_RS08300 flagellar export chaperone FliS low > 75
Pantoea sp. MT58 0.32 IAI47_12145 flagellar basal body rod protein FlgF 0.30 IAI47_08135 flagellar export chaperone FliS low > 76
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_2093 flagellar basal-body rod protein FlgF 0.26 Ga0059261_2057 flagellar biosynthetic protein FliS 0.48 41
Erwinia amylovora T8 0.31 OLJFJH_15605 flagellar biosynthesis protein FlgF 0.35 OLJFJH_10020 flagellar export chaperone FliS low > 58
Sphingobium sp. HT1-2 0.31 GFF3710 Flagellar basal-body rod protein FlgF 0.17 GFF3744 Flagellar biosynthesis protein FliS low > 95
Rahnella sp. WP5 0.31 EX31_RS11295 flagellar basal body rod protein FlgF 0.33 EX31_RS09465 flagellar export chaperone FliS 0.52 31
Variovorax sp. SCN45 0.31 GFF5719 Flagellar basal-body rod protein FlgF 0.26 GFF5755 Flagellar biosynthesis protein FliS — —
Ralstonia solanacearum UW163 0.30 UW163_RS17465 flagellar basal-body rod protein FlgF 0.30 UW163_RS17570 flagellar export chaperone FliS — —
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS21720 flagellar basal-body rod protein FlgF 0.30 RALBFv3_RS21620 flagellar export chaperone FliS low > 76
Dickeya dadantii 3937 0.30 DDA3937_RS13460 flagellar basal body rod protein FlgF 0.35 DDA3937_RS13350 flagellar export chaperone FliS 0.74 65
Ralstonia solanacearum PSI07 0.30 RPSI07_RS01410 flagellar basal-body rod protein FlgF 0.29 RPSI07_RS01505 flagellar export chaperone FliS low > 81
Dickeya dianthicola 67-19 0.30 HGI48_RS13505 flagellar basal body rod protein FlgF 0.35 HGI48_RS13395 flagellar export chaperone FliS low > 71
Dickeya dianthicola ME23 0.30 DZA65_RS13990 flagellar basal body rod protein FlgF 0.35 DZA65_RS13880 flagellar export chaperone FliS 0.92 47
Ralstonia solanacearum GMI1000 0.30 RS_RS18815 flagellar basal-body rod protein FlgF 0.29 RS_RS19005 flagellar export chaperone FliS low > 80
Erwinia tracheiphila HP pepo 2.2 0.29 IJEDHG_21065 flgF flagellar biosynthesis protein FlgF 0.31 IJEDHG_21905 fliS flagellar export chaperone FliS — —
Erwinia tracheiphila SCR3 0.29 LU632_RS10415 flagellar basal body rod protein FlgF 0.31 LU632_RS13845 fliS flagellar export chaperone FliS — —
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS22270 flagellar basal-body rod protein FlgF 0.27 ABZR87_RS22165 flagellar export chaperone FliS low > 80

Not shown: 18 genomes with orthologs for CSW01_11205 only; 1 genomes with orthologs for CSW01_10675 only