Conservation of cofitness between CSW01_03980 and CSW01_10265 in Vibrio cholerae E7946 ATCC 55056

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03980 IMP dehydrogenase 1.0 CSW01_10265 c-type cytochrome biogenesis protein CcmF 0.92 14
Shewanella sp. ANA-3 0.78 Shewana3_1235 inosine 5'-monophosphate dehydrogenase (RefSeq) 0.50 Shewana3_0234 cytochrome c-type biogenesis protein CcmF (RefSeq) low > 73
Shewanella oneidensis MR-1 0.77 SO3293 guaB inosine-5'-monophosphate dehydrogenase (NCBI ptt file) 0.49 SO0266 ccmF-1 cytochrome c-type biogenesis protein CcmF (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.77 Sama_2359 inosine 5'-monophosphate dehydrogenase (RefSeq) 0.51 Sama_0248 cytochrome c-type biogenesis protein CcmF (RefSeq) — —
Pectobacterium carotovorum WPP14 0.77 HER17_RS06155 IMP dehydrogenase 0.63 HER17_RS09055 heme lyase CcmF/NrfE family subunit low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2160 'Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain' transl_table=11 0.58 GFF4877 Cytochrome c heme lyase subunit CcmF — —
Serratia liquefaciens MT49 0.77 IAI46_19210 IMP dehydrogenase 0.65 IAI46_18085 heme lyase CcmF/NrfE family subunit — —
Pantoea sp. MT58 0.77 IAI47_05105 IMP dehydrogenase 0.65 IAI47_06090 heme lyase CcmF/NrfE family subunit — —
Klebsiella pneumoniae MKP103 0.77 KDGMDA_28160 IMP dehydrogenase 0.62 KDGMDA_23845 cytochrome c maturation protein CcmE low > 95
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS14995 IMP dehydrogenase 0.64 PagCFBP13505_RS00045 heme lyase CcmF/NrfE family subunit — —
Shewanella loihica PV-4 0.76 Shew_1297 inositol-5-monophosphate dehydrogenase (RefSeq) 0.51 Shew_0193 cytochrome c-type biogenesis protein CcmF (RefSeq) — —
Rahnella sp. WP5 0.76 EX31_RS20450 IMP dehydrogenase 0.67 EX31_RS19745 heme lyase CcmF/NrfE family subunit low > 89
Escherichia coli ECOR27 0.75 NOLOHH_13410 guaB IMP dehydrogenase 0.60 NOLOHH_14880 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 76
Escherichia coli Nissle 1917 0.75 ECOLIN_RS14240 IMP dehydrogenase 0.60 ECOLIN_RS12835 cytochrome c-type biogenesis heme lyase CcmF — —
Escherichia fergusonii Becca 0.75 EFB2_01385 Inosine-5'-monophosphate dehydrogenase 0.60 EFB2_01660 Cytochrome c-type biogenesis protein CcmF low > 86
Escherichia coli BL21 0.75 ECD_02400 IMP dehydrogenase 0.60 ECD_02123 heme lyase, CcmF subunit low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_01201 'Inosine-5'-monophosphate dehydrogenase' transl_table=11 0.60 OHPLBJKB_01515 Cytochrome c-type biogenesis protein CcmF low > 74
Escherichia coli ECRC100 0.75 OKFHMN_21760 guaB IMP dehydrogenase 0.60 OKFHMN_23305 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 79
Escherichia coli BW25113 0.75 b2508 guaB inositol-5-monophosphate dehydrogenase (NCBI) 0.60 b2196 ccmF heme lyase, CcmF subunit (NCBI) — —
Escherichia coli ECRC102 0.75 NIAGMN_19530 guaB IMP dehydrogenase 0.60 NIAGMN_21070 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 80
Escherichia coli ECRC98 0.75 JDDGAC_25435 guaB IMP dehydrogenase 0.60 JDDGAC_27265 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 87
Escherichia coli ECRC101 0.75 MCAODC_12290 guaB IMP dehydrogenase 0.60 MCAODC_14355 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 87
Escherichia coli ECOR38 0.75 HEPCGN_20900 guaB IMP dehydrogenase 0.60 HEPCGN_22570 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 88
Escherichia coli ECRC62 0.75 BNILDI_12210 guaB IMP dehydrogenase 0.60 BNILDI_13800 ccmF cytochrome c-type biogenesis heme lyase CcmF low > 75
Escherichia coli ECRC99 0.75 KEDOAH_06460 guaB IMP dehydrogenase 0.60 KEDOAH_04880 ccmF cytochrome c-type biogenesis heme lyase CcmF — —
Erwinia amylovora T8 0.73 OLJFJH_10500 IMP dehydrogenase 0.63 OLJFJH_11100 heme lyase NrfEFG subunit NrfE low > 58
Alteromonas macleodii MIT1002 0.71 MIT1002_02779 Inosine-5'-monophosphate dehydrogenase 0.56 MIT1002_00965 Cytochrome c-type biogenesis protein CcmF — —
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_1158 inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) 0.54 B158DRAFT_1328 c-type cytochrome biogenesis protein CcmF — —
Pseudomonas segetis P6 0.68 ACVTMO_RS07630 guaB IMP dehydrogenase 0.55 ACVTMO_RS15395 heme lyase CcmF/NrfE family subunit — —
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_06525 inosine-5'-monophosphate dehydrogenase 0.52 AO356_03635 cytochrome C biogenesis protein CcmF — —
Pseudomonas sp. DMC3 0.65 GFF4327 Inosine-5'-monophosphate dehydrogenase 0.51 GFF2490 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas sp. RS175 0.65 PFR28_00310 'Inosine-5'-monophosphate dehydrogenase' transl_table=11 0.52 PFR28_00870 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas sp. S08-1 0.65 OH686_17590 inosine-5'-monophosphate dehydrogenase 0.51 OH686_02635 cytochrome c-type biogenesis protein CcmF — —
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_1261 inosine-5'-monophosphate dehydrogenase 0.52 Psyr_3388 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_3165 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain 0.51 Pf6N2E2_2555 Cytochrome c heme lyase subunit CcmF — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_1261 inosine-5'-monophosphate dehydrogenase 0.52 Psyr_3388 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_15950 inosine-5'-monophosphate dehydrogenase 0.51 AO353_18875 cytochrome C biogenesis protein CcmF — —
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_840 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain 0.51 Pf1N1B4_3644 Cytochrome c heme lyase subunit CcmF — —
Marinobacter adhaerens HP15 0.64 HP15_2051 inositol-5-monophosphate dehydrogenase 0.51 HP15_2281 cytochrome c assembly protein — —
Pseudomonas fluorescens SBW25 0.64 PFLU_RS24735 IMP dehydrogenase 0.51 PFLU_RS08670 heme lyase CcmF/NrfE family subunit — —
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS24735 IMP dehydrogenase 0.51 PFLU_RS08670 heme lyase CcmF/NrfE family subunit — —
Pseudomonas sp. BP01 0.64 JOY50_RS11500 guaB IMP dehydrogenase 0.49 JOY50_RS00480 heme lyase CcmF/NrfE family subunit — —
Pseudomonas simiae WCS417 0.64 PS417_23075 inosine-5-monophosphate dehydrogenase 0.52 PS417_08715 cytochrome C biogenesis protein CcmF — —
Pseudomonas putida KT2440 0.64 PP_1031 IMP dehydrogenase and single strand DNA binding factor 0.50 PP_4322 holocytochrome c synthetase — —
Pseudomonas orientalis W4I3 0.64 QF045_RS25300 IMP dehydrogenase 0.51 QF045_RS11430 heme lyase CcmF/NrfE family subunit — —
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS05410 IMP dehydrogenase 0.48 ABZR86_RS06445 heme lyase CcmF/NrfE family subunit — —
Pseudomonas stutzeri RCH2 0.64 Psest_1286 inosine-5'-monophosphate dehydrogenase 0.51 Psest_1759 c-type cytochrome biogenesis protein CcmF — —
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_04768 'Inosine-5'-monophosphate dehydrogenase' transl_table=11 0.51 GEMAOFIL_01875 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_4818 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain 0.53 PfGW456L13_4311 Cytochrome c heme lyase subunit CcmF — —
Dechlorosoma suillum PS 0.63 Dsui_2671 inosine-5''-monophosphate dehydrogenase 0.53 Dsui_1172 c-type cytochrome biogenesis protein CcmF — —
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS00105 IMP dehydrogenase 0.48 LRK54_RS16065 heme lyase CcmF/NrfE family subunit — —
Pseudomonas sp. SVBP6 0.63 COO64_RS04660 guaB IMP dehydrogenase 0.50 COO64_RS25715 heme lyase CcmF/NrfE family subunit — —
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_07095 guaB IMP dehydrogenase 0.46 OKGIIK_08585 ccmF c-type cytochrome biogenesis protein CcmF — —
Rhodanobacter denitrificans MT42 0.62 LRK55_RS18100 IMP dehydrogenase 0.48 LRK55_RS15815 heme lyase CcmF/NrfE family subunit — —
Rhodanobacter sp000427505 FW510-R12 0.62 LRK53_RS11160 IMP dehydrogenase 0.45 LRK53_RS12730 heme lyase CcmF/NrfE family subunit — —
Dinoroseobacter shibae DFL-12 0.62 Dshi_1646 inosine-5'-monophosphate dehydrogenase (RefSeq) 0.44 Dshi_4051 cytochrome c-type biogenesis protein CcmF (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.2391.1 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain 0.47 Xcc-8004.3190.1 Cytochrome c heme lyase subunit CcmF — —
Azospirillum sp. SherDot2 0.61 MPMX19_01690 Inosine-5'-monophosphate dehydrogenase 0.45 MPMX19_02533 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas aeruginosa MRSN321 0.61 DY961_RS14075 guaB;go_function=IMP IMP dehydrogenase 0.49 DY961_RS05510 heme lyase CcmF/NrfE family subunit — —
Pseudomonas aeruginosa PA14 0.61 IKLFDK_19415 IMP dehydrogenase 0.49 IKLFDK_07040 Cytochrome c-type biogenesis protein CcmF — —
Pseudomonas aeruginosa PUPa3 0.61 DQ20_RS43025 guaB;go_function=IMP IMP dehydrogenase 0.49 DQ20_RS47280 heme lyase CcmF/NrfE family subunit — —
Phaeobacter inhibens DSM 17395 0.60 PGA1_c15220 inosine-5'-monophosphate dehydrogenase GuaB 0.41 PGA1_c17010 cytochrome c-type biogenesis protein CcmF — —
Azospirillum brasilense Sp245 0.60 AZOBR_RS16110 inosine-5`-monophosphate dehydrogenase 0.45 AZOBR_RS00740 heme lyase subunit CcmF — —
Lysobacter sp. OAE881 0.59 ABIE51_RS09475 IMP dehydrogenase 0.48 ABIE51_RS08700 heme lyase CcmF/NrfE family subunit — —
Magnetospirillum magneticum AMB-1 0.59 AMB_RS19150 IMP dehydrogenase 0.47 AMB_RS21250 heme lyase CcmF/NrfE family subunit — —
Rhodopseudomonas palustris CGA009 0.56 TX73_011355 IMP dehydrogenase 0.44 TX73_009900 heme lyase CcmF/NrfE family subunit — —
Brevundimonas sp. GW460-12-10-14-LB2 0.56 A4249_RS03025 IMP dehydrogenase 0.34 A4249_RS10825 heme lyase CcmF/NrfE family subunit — —
Bosea sp. OAE506 0.56 ABIE41_RS15185 IMP dehydrogenase 0.41 ABIE41_RS21455 heme lyase CcmF/NrfE family subunit — —
Rhizobium sp. OAE497 0.55 ABIE40_RS03465 IMP dehydrogenase 0.43 ABIE40_RS05685 heme lyase CcmF/NrfE family subunit — —
Desulfovibrio vulgaris Hildenborough JW710 0.55 DVU1044 guaB inosine-5`-monophosphate dehydrogenase (TIGR) 0.21 DVU1050 ccmF cytochrome c-type biogenesis protein CcmF (TIGR) — —
Sphingobium sp. HT1-2 0.55 GFF2000 'Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain' transl_table=11 0.36 GFF83 Cytochrome c heme lyase subunit CcmF — —
Caulobacter crescentus NA1000 0.55 CCNA_01689 inosine-5'-monophosphate dehydrogenase 0.38 CCNA_02848 heme chaperone-apocytochrome heme-lyase — —
Caulobacter crescentus NA1000 Δfur 0.55 CCNA_01689 inosine-5'-monophosphate dehydrogenase 0.38 CCNA_02848 heme chaperone-apocytochrome heme-lyase — —
Desulfovibrio vulgaris Miyazaki F 0.54 DvMF_3126 inosine-5'-monophosphate dehydrogenase (RefSeq) 0.21 DvMF_3132 cytochrome c assembly protein (RefSeq) — —
Xanthobacter sp. DMC5 0.54 GFF3547 Inosine-5'-monophosphate dehydrogenase 0.41 GFF1779 Cytochrome c-type biogenesis protein CcmF — —
Rhodospirillum rubrum S1H 0.54 Rru_A0244 IMP dehydrogenase (NCBI) 0.43 Rru_A0035 Cytochrome c-type biogenesis protein CcmF (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_0893 inosine-5'-monophosphate dehydrogenase 0.30 Ga0059261_0172 Cytochrome c biogenesis factor low > 68
Sinorhizobium meliloti 1021 0.53 SMc00815 inosine 5'-monophosphate dehydrogenase 0.42 SMc02363 cytochrome C-type biogenesis transmembrane protein low > 103
Agrobacterium fabrum C58 0.48 Atu0624 inosine-5`-monophosphate dehydrogenase 0.44 Atu0975 cytochrome c-type synthesis protein — —

Not shown: 43 genomes with orthologs for CSW01_03980 only; 0 genomes with orthologs for CSW01_10265 only