Conservation of cofitness between CSW01_17810 and CSW01_09260 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17810 cobyric acid synthase CobQ 1.0 CSW01_09260 peptidylprolyl isomerase 0.73 1
Pseudomonas aeruginosa PA14 0.62 IKLFDK_06055 cobyric acid synthase 0.66 IKLFDK_08675 peptidylprolyl isomerase low > 100
Pseudomonas sp. BP01 0.62 JOY50_RS27965 cobyric acid synthase 0.56 JOY50_RS05930 peptidylprolyl isomerase — —
Pseudomonas putida KT2440 0.62 PP_1677 Adenosyl-cobyric acid synthase 0.58 PP_2903 peptidyl-prolyl cis-trans isomerase B (rotamase B) low > 96
Methylophilus sp. DMC18 0.61 GFF1471 Cobyric acid synthase 0.61 GFF2571 Peptidyl-prolyl cis-trans isomerase cyp18 low > 43
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.60 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type low > 86
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.60 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type low > 86
Pseudomonas segetis P6 0.61 MPMX49_01822 Cobyric acid synthase 0.61 MPMX49_02245 Peptidyl-prolyl cis-trans isomerase B — —
Pseudomonas sp. SVBP6 0.60 COO64_RS07225 cobyric acid synthase 0.59 COO64_RS09965 peptidylprolyl isomerase low > 93
Shewanella sp. ANA-3 0.60 Shewana3_3275 cobyric acid synthase (RefSeq) 0.76 Shewana3_2665 peptidyl-prolyl cis-trans isomerase, cyclophilin type (RefSeq) — —
Pseudomonas stutzeri RCH2 0.60 Psest_3008 cobyric acid synthase CobQ 0.63 Psest_2304 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family low > 67
Pseudomonas sp. S08-1 0.60 OH686_04965 cobyric acid synthase CobQ 0.63 OH686_03750 Peptidyl-prolyl cis-trans isomerase PpiB low > 80
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_4238 Cobyric acid synthase (EC 6.3.5.10) 0.58 PfGW456L13_2608 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 87
Pseudomonas sp. DMC3 0.60 GFF2552 Cobyric acid synthase 0.58 GFF1490 Peptidyl-prolyl cis-trans isomerase cyp18 low > 89
Shewanella oneidensis MR-1 0.60 SO1038 cobQ cobyric acid synthase CobQ (NCBI ptt file) 0.76 SO1790 ppiB-1 peptidyl-prolyl cis-trans isomerase B (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3711 Cobyric acid synthase (EC 6.3.5.10) 0.58 Pf1N1B4_4004 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 87
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_5742 Cobyric acid synthase (EC 6.3.5.10) 0.60 Pf6N2E2_151 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) — —
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_02615 cobyric acid synthase 0.58 AO353_27825 peptidylprolyl isomerase low > 101
Pseudomonas simiae WCS417 0.59 PS417_20040 cobyric acid synthase 0.57 PS417_16900 peptidylprolyl isomerase — —
Pseudomonas lactucae CFBP13502 0.59 GEMAOFIL_04205 Cobyric acid synthase 0.59 GEMAOFIL_03695 Peptidyl-prolyl cis-trans isomerase cyp18 low > 93
Shewanella loihica PV-4 0.59 Shew_0717 cobyric acid synthase (RefSeq) 0.72 Shew_2512 peptidylprolyl isomerase (RefSeq) — —
Pseudomonas sp. RS175 0.59 PFR28_03204 Cobyric acid synthase 0.59 PFR28_02745 Peptidyl-prolyl cis-trans isomerase cyp18 low > 88
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS22005 cobyric acid synthase 0.58 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase low > 109
Pseudomonas fluorescens SBW25 0.58 PFLU_RS22005 cobyric acid synthase 0.58 PFLU_RS18885 peptidyl-prolyl cis-trans isomerase low > 109
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_19160 cobyric acid synthase 0.59 AO356_01015 peptidylprolyl isomerase low > 104
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS00040 cobyric acid synthase 0.58 ABZR87_RS10630 peptidylprolyl isomerase low > 80
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS16075 cobyric acid synthase 0.56 RR42_RS06335 cyclophilin low > 128
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS13230 cobyric acid synthase 0.60 HSERO_RS09310 cyclophilin — —
Ralstonia solanacearum GMI1000 0.57 RS_RS12000 cobyric acid synthase 0.58 RS_RS05800 cyclophilin — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS12925 cobyric acid synthase 0.58 RPSI07_RS18390 cyclophilin — —
Paraburkholderia graminis OAS925 0.56 ABIE53_001255 adenosylcobyric acid synthase 0.64 ABIE53_002710 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) low > 113
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS04445 cobyric acid synthase 0.57 RALBFv3_RS14985 cyclophilin low > 76
Ralstonia solanacearum UW163 0.56 UW163_RS09225 cobyric acid synthase 0.57 UW163_RS12455 cyclophilin — —
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS25095 cobyric acid synthase 0.62 QEN71_RS06115 peptidylprolyl isomerase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_00146 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.64 H281DRAFT_00543 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) low > 103
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS04900 cobyric acid synthase 0.63 BPHYT_RS12445 cyclophilin — —
Shewanella amazonensis SB2B 0.55 Sama_0765 cobyric acid synthase (RefSeq) 0.78 Sama_1220 peptidyl-prolyl cis-trans isomerase B (RefSeq) — —
Dechlorosoma suillum PS 0.54 Dsui_0542 cobyric acid synthase CobQ 0.63 Dsui_3088 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family low > 51
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_01827 cobyric acid synthase CobQ 0.26 CCNA_01655 cyclophilin-type peptidylprolyl cis-trans isomerase low > 67
Caulobacter crescentus NA1000 0.44 CCNA_01827 cobyric acid synthase CobQ 0.26 CCNA_01655 cyclophilin-type peptidylprolyl cis-trans isomerase low > 66
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3966 Cobyric acid synthase (EC 6.3.5.10) 0.66 GFF4441 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) — —
Klebsiella michiganensis M5al 0.43 BWI76_RS23010 cobyric acid synthase CobQ 0.67 BWI76_RS07085 peptidyl-prolyl cis-trans isomerase — —
Sinorhizobium meliloti 1021 0.42 SMc04309 cobyric acid synthase 0.23 SMc01208 peptidyl-prolyl cis-trans isomerase B protein — —
Magnetospirillum magneticum AMB-1 0.41 AMB_RS01485 cobyric acid synthase 0.24 AMB_RS12030 peptidylprolyl isomerase — —
Rhodopseudomonas palustris CGA009 0.41 TX73_010800 cobyric acid synthase 0.25 TX73_013475 peptidylprolyl isomerase low > 86
Klebsiella pneumoniae MKP103 0.41 KDGMDA_03575 cobyric acid synthase 0.67 KDGMDA_15020 peptidylprolyl isomerase B — —
Agrobacterium fabrum C58 0.41 Atu2808 cobyric acid synthase 0.25 Atu1679 peptidyl prolyl cis-trans isomerase low > 89
Phaeobacter inhibens DSM 17395 0.39 PGA1_c24000 cobyric acid synthase CobQ 0.24 PGA1_c17520 putative peptidyl-prolyl cis-trans isomerase A — —
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS00930 cobyric acid synthase 0.18 HMPREF1078_RS10350 peptidylprolyl isomerase low > 61
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_0630 adenosylcobyric acid synthase (glutamine-hydrolysing) (EC 6.3.5.10) 0.26 Ga0059261_2222 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family low > 68
Fusobacterium nucleatum SB010 0.38 HUW76_05230 cobyric acid synthase 0.19 HUW76_03010 peptidylprolyl isomerase low > 35
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU0816 cobQ cobyric acid synthase CobQ (TIGR) 0.64 DVU1873 ppiB-2 peptidyl-prolyl cis-trans isomerase B (TIGR) low > 55
Bosea sp. OAE506 0.37 ABIE41_RS03845 cobyric acid synthase 0.25 ABIE41_RS17835 peptidylprolyl isomerase — —
Mycobacterium tuberculosis H37Rv 0.35 Rv0255c Probable cobyric acid synthase CobQ1 0.20 Rv0009 Probable iron-regulated peptidyl-prolyl cis-trans isomerase A PpiA (PPIase A) (rotamase A) low > 58
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_2864 cobyric acid synthase (RefSeq) 0.59 DvMF_0566 peptidyl-prolyl cis-trans isomerase cyclophilin type (RefSeq) — —
Variovorax sp. SCN45 0.32 GFF426 Cobyric acid synthase (EC 6.3.5.10) 0.54 GFF553 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 127
Variovorax sp. OAS795 0.31 ABID97_RS17340 cobyric acid synthase 0.54 ABID97_RS17860 peptidylprolyl isomerase 0.32 35
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3998 Cobyric acid synthase (EC 6.3.5.10) 0.54 GFF5146 Peptidyl-prolyl cis-trans isomerase PpiB (EC 5.2.1.8) low > 90
Acidovorax sp. GW101-3H11 0.30 Ac3H11_999 Cobyric acid synthase (EC 6.3.5.10) 0.52 Ac3H11_42 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) low > 79

Not shown: 16 genomes with orthologs for CSW01_17810 only; 35 genomes with orthologs for CSW01_09260 only