Conservation of cofitness between CSW01_03145 and CSW01_05640 in Vibrio cholerae E7946 ATCC 55056

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03145 polynucleotide adenylyltransferase PcnB 1.0 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.58 4
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3732 poly(A) polymerase 0.68 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.67 GFF670 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 78
Dickeya dianthicola ME23 0.57 DZA65_RS17145 polynucleotide adenylyltransferase PcnB 0.67 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.34 74
Enterobacter sp. TBS_079 0.56 MPMX20_00829 Poly(A) polymerase I 0.67 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 85
Dickeya dadantii 3937 0.56 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB 0.67 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 74
Klebsiella michiganensis M5al 0.56 BWI76_RS05005 polynucleotide adenylyltransferase 0.68 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 92
Dickeya dianthicola 67-19 0.56 HGI48_RS16060 polynucleotide adenylyltransferase PcnB 0.68 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 71
Escherichia fergusonii Becca 0.56 EFB2_03901 Poly(A) polymerase I 0.66 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 86
Serratia liquefaciens MT49 0.56 IAI46_21220 polynucleotide adenylyltransferase PcnB 0.68 IAI46_06520 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 87
Escherichia coli ECRC99 0.56 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB 0.66 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECRC98 0.56 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB 0.66 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 87
Escherichia coli ECOR38 0.56 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB 0.66 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 88
Escherichia coli ECRC101 0.56 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB 0.66 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 87
Escherichia coli Nissle 1917 0.56 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB 0.65 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 55
Escherichia coli BW25113 0.56 b0143 pcnB poly(A) polymerase I (VIMSS) 0.66 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) low > 76
Escherichia coli BL21 0.56 ECD_00142 poly(A) polymerase 0.66 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent low > 61
Escherichia coli ECRC100 0.56 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB 0.66 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 79
Escherichia coli ECRC102 0.56 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB 0.66 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 80
Escherichia coli ECOR27 0.56 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB 0.66 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 76
Escherichia coli ECRC62 0.56 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 0.66 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_03519 Poly(A) polymerase I 0.66 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 74
Pantoea agglomerans CFBP13505 P0401 0.56 PagCFBP13505_RS13355 polynucleotide adenylyltransferase PcnB 0.66 PagCFBP13505_RS03765 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 74
Klebsiella pneumoniae MKP103 0.56 KDGMDA_13260 polynucleotide adenylyltransferase PcnB 0.65 KDGMDA_17020 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 95
Pantoea sp. MT58 0.56 IAI47_15645 polynucleotide adenylyltransferase PcnB 0.67 IAI47_13535 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 76
Pectobacterium carotovorum WPP14 0.54 HER17_RS05570 polynucleotide adenylyltransferase PcnB 0.68 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 75
Erwinia amylovora T8 0.54 OLJFJH_00775 polynucleotide adenylyltransferase PcnB 0.66 OLJFJH_16765 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 58
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_15050 Poly(A) polymerase I 0.67 IJEDHG_19560 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Erwinia tracheiphila SCR3 0.53 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB 0.67 LU632_RS09125 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Alteromonas macleodii MIT1002 0.52 MIT1002_03692 Poly(A) polymerase I precursor 0.62 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 70
Shewanella loihica PV-4 0.52 Shew_3131 poly(A) polymerase (RefSeq) 0.50 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.52 SO0872 pcnB polyA polymerase (NCBI ptt file) 0.52 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.52 Shewana3_3406 poly(A) polymerase (RefSeq) 0.53 Shewana3_2520 aminotransferase (RefSeq) — —
Shewanella amazonensis SB2B 0.50 Sama_0778 tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) 0.51 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0058 poly(A) polymerase 0.32 B158DRAFT_0179 adenosylmethionine-8-amino-7-oxononanoate transaminase — —
Pseudomonas sp. SVBP6 0.46 COO64_RS15095 polynucleotide adenylyltransferase PcnB 0.33 COO64_RS13650 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 93
Pseudomonas sp. DMC3 0.45 GFF4029 Poly(A) polymerase I 0.34 GFF179 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 89
Pseudomonas putida KT2440 0.45 PP_4697 poly(A) polymerase 0.32 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0830 Poly(A) polymerase 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme low > 86
Pseudomonas sp. BP01 0.45 JOY50_RS27670 polynucleotide adenylyltransferase PcnB 0.32 JOY50_RS09770 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 84
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0830 Poly(A) polymerase 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme low > 86
Pseudomonas lactucae CFBP13502 0.45 GEMAOFIL_04931 Poly(A) polymerase I 0.33 GEMAOFIL_05439 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 96
Pseudomonas segetis P6 0.45 MPMX49_01223 Poly(A) polymerase I 0.35 MPMX49_00641 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 75
Pseudomonas simiae WCS417 0.45 PS417_23900 poly(A) polymerase 0.33 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 88
Pseudomonas sp. RS175 0.45 PFR28_03719 Poly(A) polymerase I 0.33 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_14395 poly(A) polymerase 0.33 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 101
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.33 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.23 98
Pseudomonas fluorescens SBW25 0.44 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.33 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 109
Pseudomonas sp. S08-1 0.44 OH686_17255 Poly(A) polymerase 0.33 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.85 31
Pseudomonas aeruginosa PUPa3 0.44 DQ20_RS52655 polynucleotide adenylyltransferase PcnB 0.34 DQ20_RS37220 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 101
Pseudomonas aeruginosa MRSN321 0.44 DY961_RS09375 polynucleotide adenylyltransferase PcnB 0.34 DY961_RS22080 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) 0.34 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 87
Marinobacter adhaerens HP15 0.44 HP15_326 polyA polymerase 0.31 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase low > 73
Pseudomonas orientalis W4I3 0.44 QF045_RS26160 polynucleotide adenylyltransferase PcnB 0.33 QF045_RS00935 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 93
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) 0.33 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 103
Pseudomonas aeruginosa PA14 0.44 IKLFDK_29965 polynucleotide adenylyltransferase PcnB 0.34 IKLFDK_23320 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 98
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_16070 poly(A) polymerase 0.34 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 104
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) 0.34 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 87
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS00805 polynucleotide adenylyltransferase PcnB 0.37 ABZR86_RS10225 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 74
Lysobacter sp. OAE881 0.43 ABIE51_RS08015 polynucleotide adenylyltransferase PcnB 0.30 ABIE51_RS05265 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 62
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_03875 pcnB tRNA nucleotidyltransferase/poly(A) polymerase 0.33 OKGIIK_11015 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 53
Rhodanobacter sp000427505 FW510-R12 0.42 LRK53_RS13510 polynucleotide adenylyltransferase PcnB 0.33 LRK53_RS05775 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3054.1 Poly(A) polymerase (EC 2.7.7.19) 0.31 Xcc-8004.1559.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 74
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS15105 polynucleotide adenylyltransferase PcnB 0.34 LRK54_RS04150 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 59
Rhodanobacter denitrificans MT42 0.42 LRK55_RS14820 polynucleotide adenylyltransferase PcnB 0.34 LRK55_RS03920 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 63
Pseudomonas stutzeri RCH2 0.41 Psest_0998 poly(A) polymerase 0.32 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase low > 67
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS00935 polynucleotide adenylyltransferase PcnB 0.31 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.57 54
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS05300 polynucleotide adenylyltransferase PcnB 0.29 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 76
Ralstonia solanacearum PSI07 0.38 RPSI07_RS12000 polynucleotide adenylyltransferase PcnB 0.30 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 81
Ralstonia solanacearum GMI1000 0.38 RS_RS13165 polynucleotide adenylyltransferase PcnB 0.30 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 80
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS17235 poly(A) polymerase 0.27 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA low > 128
Methylophilus sp. DMC18 0.37 GFF2604 Poly(A) polymerase I 0.29 GFF2554 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase — —
Castellaniella sp019104865 MT123 0.37 ABCV34_RS08810 polynucleotide adenylyltransferase PcnB 0.39 ABCV34_RS15300 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 48
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS26465 polynucleotide adenylyltransferase PcnB 0.26 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_04706 poly(A) polymerase 0.27 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 103
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS03620 poly(A) polymerase 0.27 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 109
Paraburkholderia graminis OAS925 0.35 ABIE53_000870 poly(A) polymerase 0.27 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.22 72
Dechlorosoma suillum PS 0.35 Dsui_1515 poly(A) polymerase 0.28 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF3438 Poly(A) polymerase (EC 2.7.7.19) 0.30 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 90
Variovorax sp. OAS795 0.32 ABID97_RS08710 polynucleotide adenylyltransferase PcnB 0.29 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 91
Acinetobacter baumannii LAC-4 0.28 RR41_RS16060 polynucleotide adenylyltransferase PcnB 0.58 RR41_RS15235 adenosylmethionine--8-amino-7-oxononanoate transaminase — —

Not shown: 0 genomes with orthologs for CSW01_03145 only; 36 genomes with orthologs for CSW01_05640 only