Conservation of cofitness between CSW01_06530 and CSW01_02875 in Vibrio cholerae E7946 ATCC 55056

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06530 aromatic amino acid aminotransferase 1.0 CSW01_02875 DNA recombination/repair protein RecA 0.60 16
Shewanella sp. ANA-3 0.66 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.81 Shewana3_1126 recA recombinase A (RefSeq) low > 73
Shewanella loihica PV-4 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.80 Shew_1215 recA recombinase A (RefSeq) low > 60
Enterobacter sp. TBS_079 0.66 MPMX20_01586 Aspartate aminotransferase 0.81 MPMX20_03580 Protein RecA low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.81 EX28DRAFT_2785 protein RecA — —
Shewanella amazonensis SB2B 0.65 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.80 Sama_1046 recA recombinase A (RefSeq) low > 62
Shewanella oneidensis MR-1 0.65 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.81 SO3430 recA recA protein (NCBI ptt file) low > 76
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13516_RS12850 amino acid aminotransferase 0.81 PagCFBP13516_RS04670 recA recombinase RecA low > 80
Escherichia coli ECRC62 0.65 BNILDI_20195 aspC aspartate transaminase 0.80 BNILDI_11105 recA recombinase RecA low > 75
Escherichia coli Nissle 1917 0.65 ECOLIN_RS04910 aspartate transaminase 0.80 ECOLIN_RS15060 recombinase RecA — —
Escherichia fergusonii Becca 0.65 EFB2_03136 Aspartate aminotransferase 0.80 EFB2_01225 Protein RecA low > 86
Klebsiella michiganensis M5al 0.65 BWI76_RS09870 aromatic amino acid aminotransferase 0.80 BWI76_RS22180 recombinase RecA — —
Erwinia amylovora T8 0.65 OLJFJH_16045 aromatic amino acid aminotransferase 0.80 OLJFJH_09575 recombinase RecA low > 58
Escherichia coli ECOR38 0.65 HEPCGN_23140 aspC aspartate transaminase 0.80 HEPCGN_19900 recA recombinase RecA low > 88
Escherichia coli BL21 0.65 ECD_00932 aspartate aminotransferase, PLP-dependent 0.80 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_02738 Aspartate aminotransferase 0.80 OHPLBJKB_01035 Protein RecA low > 74
Escherichia coli ECOR27 0.65 NOLOHH_21940 aspC aspartate transaminase 0.80 NOLOHH_12545 recA recombinase RecA low > 75
Escherichia coli BW25113 0.65 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.80 b2699 recA recombinase A (NCBI) low > 76
Klebsiella pneumoniae MKP103 0.64 KDGMDA_18070 Aspartate aminotransferase 0.81 KDGMDA_02850 recombinase RecA low > 94
Klebsiella pneumoniae MRSN742743 0.64 GJGHJB_03288 aspC Aspartate aminotransferase 0.81 GJGHJB_01083 recA recombinase RecA — —
Erwinia tracheiphila HP pepo 2.2 0.64 IJEDHG_20410 aromatic amino acid aminotransferase 0.81 IJEDHG_01625 recA recombinase RecA — —
Escherichia coli ECRC100 0.64 OKFHMN_05385 aspC aspartate transaminase 0.80 OKFHMN_20705 recA recombinase RecA — —
Escherichia coli ECRC101 0.64 MCAODC_24775 aspC aspartate transaminase 0.80 MCAODC_11230 recA recombinase RecA low > 87
Escherichia coli ECRC102 0.64 NIAGMN_03105 aspC aspartate transaminase 0.80 NIAGMN_18475 recA recombinase RecA — —
Escherichia coli ECRC99 0.64 KEDOAH_22350 aspC aspartate transaminase 0.80 KEDOAH_07430 recA recombinase RecA — —
Erwinia tracheiphila SCR3 0.64 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.81 LU632_RS15735 recA recombinase RecA — —
Escherichia coli ECRC98 0.64 JDDGAC_08995 aspC aspartate transaminase 0.80 JDDGAC_24370 recA recombinase RecA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.81 GFF4693 RecA protein — —
Pantoea sp. MT58 0.64 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.80 IAI47_04300 recombinase RecA low > 76
Rahnella sp. WP5 0.64 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.82 EX31_RS07800 recombinase RecA low > 89
Dickeya dianthicola 67-19 0.64 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.82 HGI48_RS16355 recombinase RecA low > 71
Serratia liquefaciens MT49 0.63 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.80 IAI46_03840 recombinase RecA low > 87
Dickeya dadantii 3937 0.63 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.82 DDA3937_RS16245 recombinase RecA low > 74
Pectobacterium carotovorum WPP14 0.63 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 0.83 HER17_RS05045 recombinase RecA low > 75
Dickeya dianthicola ME23 0.63 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.82 DZA65_RS17450 recombinase RecA — —
Pseudomonas segetis P6 0.49 ACVTMO_RS15320 amino acid aminotransferase 0.73 ACVTMO_RS16500 recA recombinase RecA low > 75
Pseudomonas aeruginosa PUPa3 0.47 NPBIFN_01859 aspC Aspartate aminotransferase 0.73 NPBIFN_01371 recA recombinase RecA low > 101
Collimonas humicola GW821-FHT01A05 0.47 MPMX01_01277 Tyrosine aminotransferase 0.66 MPMX01_04407 Protein RecA — —
Pseudomonas aeruginosa MRSN321 0.47 PFGADD_01822 aspC Aspartate aminotransferase 0.73 PFGADD_01352 recA recombinase RecA low > 99
Pseudomonas sp. BP01 0.47 JOY50_RS16720 amino acid aminotransferase 0.72 JOY50_RS23780 recA recombinase RecA low > 84
Pseudomonas putida KT2440 0.47 PP_1972 aromatic-amino-acid aminotransferase 0.72 PP_1629 Protein RecA low > 96
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.130.1 hypothetical protein 0.67 Xcc-8004.3111.1 RecA protein — —
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_50 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.73 Pf6N2E2_2993 RecA protein — —
Pseudomonas sp. FW215-L2 0.47 GFF3208 Aromatic-amino-acid aminotransferase 0.73 GFF2559 Protein RecA low > 111
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS05990 aromatic amino acid aminotransferase 0.63 RR42_RS03080 recombinase RecA low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF4777 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) @ Aspartate aminotransferase (EC 2.6.1.1) 0.62 GFF2500 RecA protein — —
Pseudomonas simiae WCS417 0.46 PS417_18690 aromatic amino acid aminotransferase 0.72 PS417_05815 recombinase RecA low > 88
Paraburkholderia graminis OAS925 0.46 ABIE53_001644 aromatic-amino-acid transaminase 0.66 ABIE53_003448 recombination protein RecA low > 113
Pseudomonas sp. DMC3 0.46 GFF773 Aromatic-amino-acid aminotransferase 0.73 GFF2111 Protein RecA low > 89
Acidovorax sp. GW101-3H11 0.46 Ac3H11_4115 Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.63 Ac3H11_1255 RecA protein — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_3960 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.73 PfGW456L13_4668 RecA protein low > 87
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS06900 aspartate aminotransferase 0.66 BPHYT_RS16360 recombinase RecA — —
Pseudomonas orientalis W4I3 0.46 QF045_RS20810 amino acid aminotransferase 0.72 QF045_RS08730 recombinase RecA low > 93
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS20660 aspartate/tyrosine/aromatic aminotransferase 0.72 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas stutzeri RCH2 0.46 Psest_1295 Aspartate/tyrosine/aromatic aminotransferase 0.72 Psest_2872 protein RecA low > 67
Pseudomonas fluorescens SBW25 0.46 PFLU_RS20660 aspartate/tyrosine/aromatic aminotransferase 0.72 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas protegens RBAN4 0.46 FABNJH_10680 Aminotransferase 0.72 FABNJH_06445 recA recombinase RecA — —
Pseudomonas sp. SVBP6 0.46 COO64_RS05735 amino acid aminotransferase 0.73 COO64_RS19930 recA recombinase RecA low > 91
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_20540 aromatic amino acid aminotransferase 0.73 AO353_16805 recombinase RecA low > 101
Castellaniella sp019104865 MT123 0.46 ABCV34_RS05115 amino acid aminotransferase 0.67 ABCV34_RS04460 recombinase RecA — —
Pseudomonas sp. S08-1 0.46 OH686_04585 Biosynthetic Aromatic amino acid aminotransferase alpha or Aromatic-amino-acid aminotransferase 0.73 OH686_18205 protein RecA low > 80
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS23875 amino acid aminotransferase 0.66 QEN71_RS02335 recombinase RecA — —
Ralstonia solanacearum PSI07 0.46 RPSI07_RS19245 aspartate/tyrosine/aromatic aminotransferase 0.64 RPSI07_RS21260 recombinase RecA low > 81
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_21330 aromatic amino acid aminotransferase 0.73 AO356_05670 recombinase RecA low > 104
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_27 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.73 Pf1N1B4_3143 RecA protein low > 87
Pseudomonas sp. RS175 0.46 PFR28_02838 Aromatic-amino-acid aminotransferase 0.73 PFR28_00472 Protein RecA low > 88
Ralstonia solanacearum GMI1000 0.46 RS_RS05000 aspartate/tyrosine/aromatic aminotransferase 0.63 RS_RS02760 DNA recombination/repair protein RecA — —
Variovorax sp. SCN45 0.46 GFF944 Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.64 GFF5390 RecA protein low > 127
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS16490 amino acid aminotransferase 0.68 ABZR86_RS00660 recombinase RecA low > 74
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04974 aromatic-amino-acid transaminase 0.66 H281DRAFT_04208 RecA protein low > 103
Variovorax sp. OAS795 0.46 ABID97_RS13990 amino acid aminotransferase 0.64 ABID97_RS02275 recombinase RecA low > 91
Pseudomonas lactucae CFBP13502 0.46 GEMAOFIL_03965 Aromatic-amino-acid aminotransferase 0.73 GEMAOFIL_01333 Protein RecA low > 96
Dechlorosoma suillum PS 0.46 Dsui_2433 aspartate/tyrosine/aromatic aminotransferase 0.66 Dsui_0707 protein RecA low > 51
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS09935 amino acid aminotransferase 0.63 ABZR87_RS07965 recombinase RecA low > 80
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_13195 Aminotransferase 0.71 OKGIIK_03740 recA recombinase RecA — —
Ralstonia solanacearum UW163 0.45 UW163_RS11685 aspartate/tyrosine/aromatic aminotransferase 0.63 UW163_RS01625 recombinase RecA — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS14220 aspartate/tyrosine/aromatic aminotransferase 0.63 RALBFv3_RS12010 recombinase RecA — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS10685 aspartate/tyrosine/aromatic aminotransferase 0.71 LRK54_RS14980 recombinase RecA low > 59
Rhodanobacter denitrificans MT42 0.45 LRK55_RS10325 amino acid aminotransferase 0.71 LRK55_RS14695 recombinase RecA low > 63
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS15835 aspartate aminotransferase 0.65 HSERO_RS03270 protein RecA low > 78
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_1973 Aspartate transaminase 0.72 Psyr_1378 RecA protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_1973 Aspartate transaminase 0.72 Psyr_1378 RecA protein low > 86
Rhodanobacter sp000427505 FW510-R12 0.44 LRK53_RS03475 aspartate/tyrosine/aromatic aminotransferase 0.71 LRK53_RS13640 recombinase RecA — —
Acinetobacter radioresistens SK82 0.43 MPMX26_01473 Aromatic-amino-acid aminotransferase 0.71 MPMX26_01308 Protein RecA low > 36
Acinetobacter baumannii LAC-4 0.43 RR41_RS18495 aspartate/tyrosine/aromatic aminotransferase 0.71 RR41_RS08110 recombinase RecA — —

Not shown: 0 genomes with orthologs for CSW01_06530 only; 40 genomes with orthologs for CSW01_02875 only