Conservation of cofitness between CSW01_02515 and CSW01_02840 in Vibrio cholerae E7946 ATCC 55056

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02515 transketolase 1.0 CSW01_02840 DNA mismatch repair protein MutS 0.70 7
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00781 Transketolase 1 0.68 OHPLBJKB_01000 DNA mismatch repair protein MutS — —
Escherichia coli ECOR38 0.78 HEPCGN_18630 tkt transketolase 0.68 HEPCGN_19705 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECRC102 0.78 NIAGMN_17090 tkt transketolase 0.68 NIAGMN_18295 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC62 0.78 BNILDI_09775 tkt transketolase 0.68 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli ECRC98 0.78 JDDGAC_22955 tkt transketolase 0.68 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 86
Escherichia coli BL21 0.78 ECD_02765 transketolase 1, thiamine triphosphate-binding 0.68 ECD_02583 methyl-directed mismatch repair protein low > 61
Klebsiella michiganensis M5al 0.78 BWI76_RS24015 transketolase 0.69 BWI76_RS22600 DNA mismatch repair protein MutS — —
Escherichia coli BW25113 0.78 b2935 tktA transketolase 1, thiamin-binding (NCBI) 0.68 b2733 mutS DNA mismatch repair protein (NCBI) low > 76
Escherichia fergusonii Becca 0.78 EFB2_00966 Transketolase 1 0.68 EFB2_01179 DNA mismatch repair protein MutS low > 86
Escherichia coli ECRC101 0.78 MCAODC_09845 tkt transketolase 0.68 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECRC99 0.78 KEDOAH_08815 tkt transketolase 0.68 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC100 0.78 OKFHMN_19325 tkt transketolase 0.68 OKFHMN_20525 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECOR27 0.78 NOLOHH_11230 tkt transketolase 0.68 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli Nissle 1917 0.78 ECOLIN_RS16330 transketolase 0.68 ECOLIN_RS15275 DNA mismatch repair protein MutS 0.58 29
Enterobacter sp. TBS_079 0.78 MPMX20_03780 Transketolase 1 0.69 MPMX20_03619 DNA mismatch repair protein MutS low > 85
Enterobacter asburiae PDN3 0.78 EX28DRAFT_2974 transketolase, bacterial and yeast 0.69 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3028 Transketolase (EC 2.2.1.1) 0.69 GFF4773 DNA mismatch repair protein MutS low > 78
Dickeya dadantii 3937 0.78 DDA3937_RS18525 transketolase 0.70 DDA3937_RS05230 DNA mismatch repair protein MutS — —
Erwinia tracheiphila SCR3 0.78 LU632_RS05520 tkt transketolase 0.69 LU632_RS06485 mutS DNA mismatch repair protein MutS low > 74
Erwinia amylovora T8 0.78 OLJFJH_08645 transketolase 0.69 OLJFJH_09385 DNA mismatch repair protein MutS low > 58
Dickeya dianthicola ME23 0.77 DZA65_RS19585 transketolase 0.70 DZA65_RS05570 DNA mismatch repair protein MutS — —
Dickeya dianthicola 67-19 0.77 HGI48_RS18450 transketolase 0.70 HGI48_RS05230 DNA mismatch repair protein MutS — —
Pectobacterium carotovorum WPP14 0.77 HER17_RS02680 transketolase 0.70 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Pantoea sp. MT58 0.77 IAI47_03680 transketolase 0.70 IAI47_04240 DNA mismatch repair protein MutS low > 76
Serratia liquefaciens MT49 0.76 IAI46_21045 transketolase 0.70 IAI46_03800 DNA mismatch repair protein MutS — —
Rahnella sp. WP5 0.76 EX31_RS21400 transketolase 0.70 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Shewanella sp. ANA-3 0.75 Shewana3_3353 transketolase (RefSeq) 0.65 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) — —
Shewanella loihica PV-4 0.75 Shew_0752 transketolase (RefSeq) 0.66 Shew_1214 DNA mismatch repair protein (RefSeq) — —
Shewanella oneidensis MR-1 0.74 SO0930 tkt transketolase (NCBI ptt file) 0.64 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.74 MIT1002_00861 Transketolase 1 0.61 MIT1002_00953 DNA mismatch repair protein MutS — —
Pseudomonas sp. S08-1 0.73 OH686_10770 transketolase 0.56 OH686_18195 DNA mismatch repair protein MutS — —
Pseudomonas sp. SVBP6 0.72 COO64_RS17555 tkt transketolase 0.56 COO64_RS19805 mutS DNA mismatch repair protein MutS — —
Pseudomonas sp. DMC3 0.72 GFF158 Transketolase 1 0.55 GFF2086 DNA mismatch repair protein MutS — —
Pseudomonas putida KT2440 0.72 PP_4965 transketolase A 0.56 PP_1626 DNA mismatch repair protein MutS — —
Pseudomonas sp. RS175 0.71 PFR28_04188 Transketolase 1 0.56 PFR28_00429 DNA mismatch repair protein MutS — —
Marinobacter adhaerens HP15 0.71 HP15_2913 bacterial transketolase 0.57 HP15_1047 DNA mismatch repair protein MutS — —
Pseudomonas sp. BP01 0.71 JOY50_RS09870 tkt transketolase 0.55 JOY50_RS23765 mutS DNA mismatch repair protein MutS — —
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_13680 transketolase 0.56 AO356_05875 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens SBW25 0.71 PFLU_RS28095 transketolase 0.55 PFLU_RS05765 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS28095 transketolase 0.55 PFLU_RS05765 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_4655 Transketolase (EC 2.2.1.1) 0.56 Pf6N2E2_3035 DNA mismatch repair protein MutS — —
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_0510 transketolase, bacterial and yeast 0.51 B158DRAFT_1529 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_07955 transketolase 0.56 AO353_16625 DNA mismatch repair protein MutS — —
Pseudomonas stutzeri RCH2 0.71 Psest_0328 transketolase, bacterial and yeast 0.56 Psest_2875 DNA mismatch repair protein MutS — —
Pseudomonas aeruginosa PA14 0.71 IKLFDK_22685 transketolase 0.57 IKLFDK_18480 DNA mismatch repair protein MutS — —
Pseudomonas simiae WCS417 0.71 PS417_26440 transketolase 0.55 PS417_05680 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_2397 Transketolase (EC 2.2.1.1) 0.55 Pf1N1B4_3117 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1064 Transketolase (EC 2.2.1.1) 0.55 PfGW456L13_4672 DNA mismatch repair protein MutS — —
Dechlorosoma suillum PS 0.65 Dsui_1561 transketolase 0.49 Dsui_2244 DNA mismatch repair protein MutS — —
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS01440 transketolase 0.49 ABZR87_RS10580 DNA mismatch repair protein MutS — —
Methylophilus sp. DMC18 0.63 GFF2501 Transketolase 1 0.51 GFF439 DNA mismatch repair protein MutS — —
Rhodanobacter sp000427505 FW510-R12 0.63 LRK53_RS17110 transketolase 0.51 LRK53_RS13685 DNA mismatch repair protein MutS low > 60
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS18655 transketolase 0.52 ABZR86_RS00630 DNA mismatch repair protein MutS low > 74
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS05750 transketolase 0.51 LRK54_RS14935 DNA mismatch repair protein MutS — —
Rhodanobacter denitrificans MT42 0.63 LRK55_RS05505 transketolase 0.52 LRK55_RS14650 DNA mismatch repair protein MutS low > 63
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_01095 tkt transketolase 0.53 OKGIIK_03705 mutS DNA mismatch repair protein MutS low > 52
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS17575 transketolase 0.47 RR42_RS06285 DNA mismatch repair protein MutS — —
Desulfovibrio vulgaris Miyazaki F 0.62 DvMF_0976 transketolase (RefSeq) 0.33 DvMF_0355 DNA mismatch repair protein MutS (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.62 DVU2530 tkt transketolase (TIGR) 0.32 DVU1649 mutS DNA mismatch repair protein MutS (TIGR) — —
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS05870 transketolase 0.47 RALBFv3_RS14920 DNA mismatch repair protein MutS — —
Ralstonia solanacearum UW163 0.62 UW163_RS07755 transketolase 0.47 UW163_RS12390 DNA mismatch repair protein MutS — —
Ralstonia solanacearum GMI1000 0.61 RS_RS13760 transketolase 0.47 RS_RS05735 DNA mismatch repair protein MutS — —
Ralstonia solanacearum PSI07 0.61 RPSI07_RS11430 transketolase 0.48 RPSI07_RS18440 DNA mismatch repair protein MutS — —
Xanthobacter sp. DMC5 0.56 GFF2443 Transketolase 2 0.31 GFF3848 DNA mismatch repair protein MutS — —
Variovorax sp. SCN45 0.54 GFF7176 Transketolase (EC 2.2.1.1) 0.42 GFF6634 DNA mismatch repair protein MutS — —
Sinorhizobium meliloti 1021 0.53 SMc02342 transketolase 0.32 SMc01125 DNA mismatch repair protein MutS low > 103
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS02950 transketolase 0.35 ABZR88_RS10580 DNA mismatch repair protein MutS low > 71
Rhodopseudomonas palustris CGA009 0.46 TX73_024110 transketolase 0.33 TX73_002655 DNA mismatch repair protein MutS 0.61 27
Azospirillum brasilense Sp245 0.45 AZOBR_RS09010 transketolase 0.31 AZOBR_RS02125 DNA mismatch repair protein MutS — —
Magnetospirillum magneticum AMB-1 0.43 AMB_RS06990 transketolase 0.32 AMB_RS01455 DNA mismatch repair protein MutS — —
Dinoroseobacter shibae DFL-12 0.42 Dshi_1738 transketolase (RefSeq) 0.33 Dshi_3466 DNA mismatch repair protein MutS (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS00780 transketolase 0.28 A4249_RS12110 DNA mismatch repair protein MutS — —
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS08725 transketolase 0.35 HMPREF1078_RS06455 DNA mismatch repair protein MutS — —
Cellulophaga baltica 18 0.27 M666_RS17560 transketolase 0.34 M666_RS07920 DNA mismatch repair protein MutS — —

Not shown: 1 genomes with orthologs for CSW01_02515 only; 35 genomes with orthologs for CSW01_02840 only