Conservation of cofitness between CSW01_01010 and CSW01_02460 in Vibrio cholerae E7946 ATCC 55056

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01010 oligopeptidase A 1.0 CSW01_02460 type IV pili twitching motility protein PilT 0.62 11
Klebsiella pneumoniae MKP103 0.73 KDGMDA_07425 oligopeptidase A 0.46 KDGMDA_04610 twitching motility protein PilT low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.45 GFF3053 Twitching motility protein PilT low > 78
Enterobacter asburiae PDN3 0.72 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.45 EX28DRAFT_2988 pilus retraction protein PilT low > 76
Escherichia coli ECOR27 0.72 NOLOHH_08350 prlC oligopeptidase A 0.45 NOLOHH_11130 yggR Uncharacterized protein YggR low > 76
Pantoea sp. MT58 0.72 IAI47_01345 oligopeptidase A 0.44 IAI47_03600 type IV pilus twitching motility protein PilT low > 76
Escherichia coli BL21 0.72 ECD_03347 oligopeptidase A 0.45 ECD_02780 putative PilT family AAA+ ATPase low > 61
Escherichia coli ECRC62 0.72 BNILDI_03210 prlC oligopeptidase A 0.45 BNILDI_09710 yggR Uncharacterized protein YggR low > 75
Escherichia fergusonii Becca 0.72 EFB2_00317 Oligopeptidase A 0.45 EFB2_00952 putative protein YggR low > 86
Pantoea agglomerans CFBP13505 P0401 0.72 PagCFBP13505_RS17845 oligopeptidase A 0.44 PagCFBP13505_RS16095 type IV pilus twitching motility protein PilT low > 74
Escherichia coli ECOR38 0.72 HEPCGN_15325 prlC oligopeptidase A 0.45 HEPCGN_18565 yggR Uncharacterized protein YggR low > 88
Escherichia coli BW25113 0.72 b3498 prlC oligopeptidase A (NCBI) 0.45 b2950 yggR putative protein transport (VIMSS) low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_04397 Oligopeptidase A 0.47 MPMX20_03808 putative protein YggR low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_00205 Oligopeptidase A 0.44 OHPLBJKB_00766 putative protein YggR low > 74
Escherichia coli Nissle 1917 0.72 ECOLIN_RS19985 oligopeptidase A 0.45 ECOLIN_RS16410 type IV pilus twitching motility protein PilT low > 55
Escherichia coli ECRC99 0.72 KEDOAH_11730 prlC oligopeptidase A 0.45 KEDOAH_08880 yggR Uncharacterized protein YggR — —
Escherichia coli ECRC101 0.72 MCAODC_06930 prlC oligopeptidase A 0.45 MCAODC_09780 yggR Uncharacterized protein YggR low > 88
Escherichia coli ECRC98 0.72 JDDGAC_20045 prlC oligopeptidase A 0.45 JDDGAC_22890 yggR Uncharacterized protein YggR low > 87
Escherichia coli ECRC100 0.72 OKFHMN_16415 prlC oligopeptidase A 0.45 OKFHMN_19260 yggR Uncharacterized protein YggR low > 79
Escherichia coli ECRC102 0.72 NIAGMN_14180 prlC oligopeptidase A 0.45 NIAGMN_17025 yggR Uncharacterized protein YggR low > 80
Klebsiella michiganensis M5al 0.72 BWI76_RS26610 oligopeptidase A 0.44 BWI76_RS24095 twitching motility protein PilT low > 92
Dickeya dadantii 3937 0.72 DDA3937_RS21265 oligopeptidase A 0.47 DDA3937_RS17295 type IV pilus twitching motility protein PilT low > 74
Serratia liquefaciens MT49 0.71 IAI46_24210 oligopeptidase A 0.48 IAI46_21405 type IV pilus twitching motility protein PilT low > 86
Erwinia tracheiphila SCR3 0.71 LU632_RS19470 prlC oligopeptidase A 0.20 LU632_RS25695 traJ plasmid transfer ATPase TraJ low > 74
Erwinia tracheiphila HP pepo 2.2 0.71 IJEDHG_12590 prlC oligopeptidase A 0.45 IJEDHG_03445 type IV pili twitching motility protein PilT low > 61
Dickeya dianthicola ME23 0.71 DZA65_RS00035 oligopeptidase A 0.46 DZA65_RS18430 type IV pilus twitching motility protein PilT low > 75
Erwinia amylovora T8 0.71 OLJFJH_04530 Oligopeptidase A 0.42 OLJFJH_08535 type IV pili twitching motility protein PilT low > 58
Pectobacterium carotovorum WPP14 0.71 HER17_RS21300 oligopeptidase A 0.48 HER17_RS03815 type IV pilus twitching motility protein PilT low > 75
Rahnella sp. WP5 0.70 EX31_RS05165 oligopeptidase A 0.44 EX31_RS02680 type IV pilus twitching motility protein PilT low > 89
Dickeya dianthicola 67-19 0.70 HGI48_RS00045 oligopeptidase A 0.46 HGI48_RS17340 type IV pilus twitching motility protein PilT low > 71
Shewanella loihica PV-4 0.68 Shew_3657 oligopeptidase A (RefSeq) 0.74 Shew_1138 twitching motility protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.67 Shewana3_4051 oligopeptidase A (RefSeq) 0.74 Shewana3_1195 pilus retraction ATPase PilT (RefSeq) low > 73
Shewanella amazonensis SB2B 0.67 Sama_3546 oligopeptidase A (RefSeq) 0.75 Sama_2476 twitching motility protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.67 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.74 SO3351 pilT twitching motility protein PilT (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.66 MIT1002_03633 Oligopeptidase A 0.72 MIT1002_03060 Twitching mobility protein low > 70
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0457 Zn-dependent oligopeptidases 0.70 B158DRAFT_0195 pilus retraction protein PilT low > 40
Pseudomonas aeruginosa PA14 0.58 IKLFDK_25215 oligopeptidase A 0.69 IKLFDK_23445 type IV pilus twitching motility protein PilT low > 100
Marinobacter adhaerens HP15 0.58 HP15_3759 oligopeptidase A-like protein 0.68 HP15_289 twitching motility protein PilT low > 73
Pseudomonas stutzeri RCH2 0.57 Psest_4320 Zn-dependent oligopeptidases 0.69 Psest_0285 pilus retraction protein PilT low > 67
Pseudomonas segetis P6 0.57 MPMX49_00359 Oligopeptidase A 0.69 MPMX49_00612 Twitching mobility protein — —
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.67 Psyr_0478 pilus retraction ATPase PilT low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.67 Psyr_0478 pilus retraction ATPase PilT low > 86
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.68 PfGW456L13_1012 Twitching motility protein PilT low > 87
Pseudomonas sp. SVBP6 0.56 COO64_RS02335 prlC oligopeptidase A 0.54 COO64_RS13005 type IV pilus twitching motility protein PilT low > 93
Pseudomonas sp. S08-1 0.56 OH686_12360 Oligopeptidase A 0.70 OH686_10970 Twitching motility protein PilT low > 80
Pseudomonas sp. DMC3 0.56 GFF663 Oligopeptidase A 0.69 GFF208 Twitching mobility protein low > 89
Pseudomonas simiae WCS417 0.56 PS417_00245 oligopeptidase A 0.63 PS417_26720 twitching motility protein PilT low > 88
Pseudomonas putida KT2440 0.56 PP_0096 oligopeptidase A 0.50 PP_5093 twitching motility protein low > 96
Pseudomonas fluorescens SBW25 0.56 PFLU_RS00240 oligopeptidase A 0.64 PFLU_RS28365 type IV pilus twitching motility protein PilT low > 109
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS00240 oligopeptidase A 0.64 PFLU_RS28365 type IV pilus twitching motility protein PilT low > 109
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.69 Pf1N1B4_2343 Twitching motility protein PilT low > 87
Pseudomonas sp. RS175 0.56 PFR28_04699 Oligopeptidase A 0.69 PFR28_04241 Twitching mobility protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_10775 oligopeptidase A 0.68 AO353_08155 twitching motility protein PilT low > 101
Pseudomonas lactucae CFBP13502 0.56 GEMAOFIL_00254 Oligopeptidase A 0.65 GEMAOFIL_05481 Twitching mobility protein low > 93
Pseudomonas sp. BP01 0.56 JOY50_RS21245 prlC oligopeptidase A 0.50 JOY50_RS20915 type IV pilus twitching motility protein PilT low > 84
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.69 Pf6N2E2_4602 Twitching motility protein PilT low > 103
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_11120 oligopeptidase A 0.69 AO356_13430 twitching motility protein PilT low > 104
Methylophilus sp. DMC18 0.52 GFF2262 Oligopeptidase A 0.68 GFF865 Twitching mobility protein low > 43
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_15380 dcp oligopeptidase A 0.70 OKGIIK_11130 pilT twitching motility protein PilT low > 53
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS07290 oligopeptidase A 0.47 HSERO_RS19000 twitching motility protein PilT low > 78
Dechlorosoma suillum PS 0.48 Dsui_0046 Zn-dependent oligopeptidase 0.68 Dsui_0604 pilus retraction protein PilT low > 51
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS14940 M3 family metallopeptidase 0.71 ABZR86_RS10420 type IV pilus twitching motility protein PilT low > 74
Rhodanobacter sp000427505 FW510-R12 0.48 LRK53_RS02390 M3 family metallopeptidase 0.69 LRK53_RS05685 type IV pilus twitching motility protein PilT low > 59
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS07340 oligopeptidase A 0.64 RR42_RS17350 twitching motility protein PilT low > 128
Ralstonia solanacearum GMI1000 0.47 RS_RS08035 oligopeptidase A 0.65 RS_RS13430 type IV pili twitching motility protein PilT low > 80
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS13490 M3 family metallopeptidase 0.66 ABZR87_RS01220 type IV pilus twitching motility protein PilT low > 80
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) 0.70 Xcc-8004.1713.1 Twitching motility protein PilT low > 74
Ralstonia solanacearum UW163 0.47 UW163_RS15000 oligopeptidase A 0.66 UW163_RS08055 type IV pili twitching motility protein PilT — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS01690 oligopeptidase A 0.66 RALBFv3_RS05570 type IV pili twitching motility protein PilT low > 76
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS08615 M3 family metallopeptidase 0.69 LRK54_RS04255 type IV pilus twitching motility protein PilT low > 59
Rhodanobacter denitrificans MT42 0.47 LRK55_RS08380 M3 family metallopeptidase 0.69 LRK55_RS04025 type IV pilus twitching motility protein PilT low > 63
Acinetobacter baumannii LAC-4 0.47 RR41_RS02340 M3 family metallopeptidase 0.73 RR41_RS14800 type IV pilus twitching motility protein PilT low > 55
Ralstonia solanacearum PSI07 0.47 RPSI07_RS15795 oligopeptidase A 0.65 RPSI07_RS11730 type IV pili twitching motility protein PilT low > 81
Acinetobacter radioresistens SK82 0.46 MPMX26_02685 Oligopeptidase A 0.72 MPMX26_02405 Twitching mobility protein low > 36
Variovorax sp. OAS795 0.44 ABID97_RS14080 M3 family metallopeptidase 0.67 ABID97_RS00255 type IV pilus twitching motility protein PilT low > 91
Variovorax sp. SCN45 0.44 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.67 GFF3743 Twitching motility protein PilT low > 127
Acidovorax sp. GW101-3H11 0.43 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.65 Ac3H11_4473 Twitching motility protein PilT low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.58 GFF2721 Twitching motility protein PilT low > 90
Synechocystis sp000284455 PCC 6803 0.42 SGL_RS17300 M3 family metallopeptidase 0.48 SGL_RS12210 type IV pilus twitching motility protein PilT low > 52
Lysobacter sp. OAE881 0.21 ABIE51_RS09155 M3 family metallopeptidase 0.69 ABIE51_RS16055 type IV pilus twitching motility protein PilT low > 62

Not shown: 27 genomes with orthologs for CSW01_01010 only; 5 genomes with orthologs for CSW01_02460 only