Conservation of cofitness between CCNA_01399 and CCNA_01179 in Caulobacter crescentus NA1000 Δfur

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 Δfur 1.0 CCNA_01399 ammonium transporter/methylammonium transporter 1.0 CCNA_01179 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase 0.73 14
Caulobacter crescentus NA1000 1.00 CCNA_01399 ammonium transporter/methylammonium transporter 1.00 CCNA_01179 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase low > 66
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_2256 ammonium transporter 0.48 Ga0059261_1500 phosphoadenylylsulfate reductase (thioredoxin) (EC 1.8.4.8) low > 68
Bosea sp. OAE506 0.52 ABIE41_RS04755 ammonium transporter 0.20 ABIE41_RS15375 phosphoadenylyl-sulfate reductase — —
Rhodopseudomonas palustris CGA009 0.51 TX73_001435 ammonium transporter 0.44 TX73_003880 phosphoadenylyl-sulfate reductase low > 86
Rhizobium sp. OAE497 0.48 ABIE40_RS18420 ammonium transporter 0.23 ABIE40_RS04475 phosphoadenylyl-sulfate reductase low > 107
Ralstonia solanacearum GMI1000 0.47 RS_RS01690 ammonium transporter 0.23 RS_RS12160 phosphoadenylyl-sulfate reductase low > 80
Sinorhizobium meliloti 1021 0.46 SMc03807 ammonium transporter 0.22 SMc00092 phosphoadenosine phosphosulfate reductase low > 103
Pseudomonas sp. RS175 0.43 PFR28_04382 Ammonia channel 0.22 PFR28_02935 Phosphoadenosine phosphosulfate reductase — —
Lysobacter sp. OAE881 0.43 ABIE51_RS01435 ammonium transporter 0.25 ABIE51_RS15835 phosphoadenylyl-sulfate reductase low > 62
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_4412 Ammonium transporter 0.22 Pf6N2E2_6054 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) — —
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_12705 ammonia channel protein 0.22 AO356_20830 phosphoadenosine phosphosulfate reductase low > 104
Agrobacterium fabrum C58 0.42 Atu2758 ammonium transporter 0.26 Atu0818 phosphoadenosine phosphosulfate reductase low > 89
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.249.1 Ammonium transporter 0.24 Xcc-8004.1256.1 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) low > 74
Pseudomonas stutzeri RCH2 0.41 Psest_3772 ammonium transporter 0.24 Psest_2328 phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase — —
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS09495 ammonium transporter 0.25 ABZR86_RS05895 phosphoadenylyl-sulfate reductase low > 74
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS29300 ammonium transporter 0.22 PFLU_RS22740 phosphoadenylyl-sulfate reductase low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS29300 ammonium transporter 0.22 PFLU_RS22740 phosphoadenylyl-sulfate reductase low > 109
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_838 Ammonium transporter 0.23 PfGW456L13_4125 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) low > 87
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2167 Ammonium transporter 0.23 Pf1N1B4_3812 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) low > 87
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_14925 Ammonium transporter 0.23 OKGIIK_05970 cysH phosphoadenylyl-sulfate reductase low > 52
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS08110 ammonium transporter 0.24 LRK54_RS00920 phosphoadenylyl-sulfate reductase low > 59
Rhodanobacter denitrificans MT42 0.38 LRK55_RS07860 ammonium transporter 0.24 LRK55_RS00695 phosphoadenylyl-sulfate reductase low > 63
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_09070 ammonia channel protein 0.22 AO353_00935 phosphoadenosine phosphosulfate reductase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF1922 Ammonium transporter 0.22 GFF4291 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) / Adenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.10) low > 90
Azospirillum sp. SherDot2 0.38 MPMX19_02223 Ammonia channel 0.41 MPMX19_00649 Phosphoadenosine phosphosulfate reductase low > 112
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0189 ammonium transporter 0.24 Psyr_2078 phosphoadenylylsulfate reductase (thioredoxin) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0189 ammonium transporter 0.24 Psyr_2078 phosphoadenylylsulfate reductase (thioredoxin) — —
Pseudomonas simiae WCS417 0.37 PS417_27615 ammonia channel protein 0.23 PS417_21125 phosphoadenosine phosphosulfate reductase low > 88
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS01405 ammonium transporter 0.24 QEN71_RS25245 phosphoadenylyl-sulfate reductase low > 153
Acinetobacter radioresistens SK82 0.37 MPMX26_00150 Ammonia channel 0.26 MPMX26_00649 Phosphoadenosine phosphosulfate reductase low > 36
Serratia liquefaciens MT49 0.37 IAI46_05085 ammonium transporter AmtB 0.23 IAI46_03695 phosphoadenylyl-sulfate reductase low > 86
Pseudomonas putida KT2440 0.37 PP_5233 ammonium transporter AmtB 0.24 PP_2328 Phosphoadenosine phosphosulfate reductase 0.16 74
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS02550 ammonia channel protein 0.25 BPHYT_RS04735 phosphoadenosine phosphosulfate reductase — —
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_02012 ammonium transporter 0.24 H281DRAFT_00116 phosphoadenylylsulfate reductase (thioredoxin) 0.36 18
Paraburkholderia graminis OAS925 0.36 ABIE53_000655 Amt family ammonium transporter 0.24 ABIE53_001228 phosphoadenosine phosphosulfate reductase low > 113
Erwinia tracheiphila SCR3 0.36 LU632_RS18270 amtB ammonium transporter AmtB 0.21 LU632_RS06410 phosphoadenylyl-sulfate reductase low > 74
Escherichia fergusonii Becca 0.35 EFB2_03606 Ammonia channel 0.20 EFB2_01155 Phosphoadenosine phosphosulfate reductase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF4368 Ammonium transporter 0.21 GFF4818 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) — —
Escherichia coli Nissle 1917 0.35 ECOLIN_RS02700 ammonium transporter AmtB 0.20 ECOLIN_RS15400 phosphoadenosine phosphosulfate reductase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_03222 Ammonia channel 0.20 OHPLBJKB_00971 Phosphoadenosine phosphosulfate reductase low > 73
Escherichia coli ECRC100 0.35 OKFHMN_08260 amtB ammonium transporter AmtB 0.20 OKFHMN_20380 cysH phosphoadenosine phosphosulfate reductase low > 80
Escherichia coli ECOR38 0.35 HEPCGN_06875 amtB ammonium transporter AmtB 0.20 HEPCGN_19085 cysH phosphoadenosine phosphosulfate reductase low > 87
Escherichia coli ECRC98 0.35 JDDGAC_11915 amtB ammonium transporter AmtB 0.20 JDDGAC_24045 cysH phosphoadenosine phosphosulfate reductase low > 86
Escherichia coli BW25113 0.35 b0451 amtB ammonium transporter (NCBI) 0.20 b2762 cysH phosphoadenosine phosphosulfate reductase (NCBI) low > 76
Escherichia coli ECRC99 0.35 KEDOAH_19705 amtB ammonium transporter AmtB 0.20 KEDOAH_07745 cysH phosphoadenosine phosphosulfate reductase — —
Escherichia coli ECOR27 0.35 NOLOHH_01195 amtB ammonium transporter AmtB 0.20 NOLOHH_12195 cysH phosphoadenosine phosphosulfate reductase low > 75
Escherichia coli ECRC102 0.35 NIAGMN_06315 amtB ammonium transporter AmtB 0.20 NIAGMN_18150 cysH phosphoadenosine phosphosulfate reductase — —
Pantoea sp. MT58 0.35 IAI47_14580 ammonium transporter AmtB 0.22 IAI47_04160 phosphoadenylyl-sulfate reductase low > 76
Escherichia coli ECRC62 0.35 BNILDI_22610 amtB ammonium transporter AmtB 0.20 BNILDI_10745 cysH phosphoadenosine phosphosulfate reductase low > 75
Escherichia coli ECRC101 0.35 MCAODC_27485 amtB ammonium transporter AmtB 0.20 MCAODC_10905 cysH phosphoadenosine phosphosulfate reductase 0.51 44
Escherichia coli BL21 0.35 ECD_00403 ammonium transporter 0.20 ECD_02607 phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent low > 61
Enterobacter asburiae PDN3 0.35 EX28DRAFT_2518 ammonium transporter 0.21 EX28DRAFT_2851 phosphoadenosine phosphosulfate reductase, thioredoxin dependent low > 76
Pectobacterium carotovorum WPP14 0.35 HER17_RS15785 ammonium transporter AmtB 0.20 HER17_RS04245 phosphoadenylyl-sulfate reductase low > 75
Azospirillum brasilense Sp245 0.35 AZOBR_RS00845 ammonia channel protein 0.43 AZOBR_RS10145 phosphoadenosine phosphosulfate reductase — —
Enterobacter sp. TBS_079 0.35 MPMX20_01043 Ammonia channel 0.21 MPMX20_03641 Phosphoadenosine phosphosulfate reductase low > 85
Klebsiella michiganensis M5al 0.35 BWI76_RS06605 ammonium transporter 0.21 BWI76_RS22755 phosphoadenosine phosphosulfate reductase 0.27 60
Rahnella sp. WP5 0.33 EX31_RS22320 ammonium transporter AmtB 0.23 EX31_RS07895 phosphoadenylyl-sulfate reductase low > 89
Dickeya dianthicola ME23 0.32 DZA65_RS06070 ammonium transporter AmtB 0.22 DZA65_RS18080 phosphoadenylyl-sulfate reductase low > 75
Dickeya dianthicola 67-19 0.32 HGI48_RS05745 ammonium transporter AmtB 0.22 HGI48_RS17005 phosphoadenylyl-sulfate reductase low > 71
Dickeya dadantii 3937 0.30 DDA3937_RS05700 ammonium transporter AmtB 0.22 DDA3937_RS16935 phosphoadenylyl-sulfate reductase low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU1231 amt ammonium transporter (TIGR) 0.15 DVU1566 cysD phosphoadenosine phosphosulfate reductase, putative (TIGR) low > 55
Phaeobacter inhibens DSM 17395 0.29 PGA1_c14730 ammonia channel 0.41 PGA1_c20770 phosphoadenosine phosphosulfate reductase CysH — —
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS14975 ammonia channel protein 0.22 CA265_RS04110 phosphoadenosine phosphosulfate reductase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_3535 ammonium transporter 0.24 Echvi_0984 phosophoadenylyl-sulfate reductase (thioredoxin)/thioredoxin-dependent adenylylsulfate APS reductase — —
Mycobacterium tuberculosis H37Rv 0.24 Rv2920c Probable ammonium-transport integral membrane protein Amt 0.30 Rv2392 Probable 3'-phosphoadenosine 5'-phosphosulfate reductase CysH (PAPS reductase, thioredoxin DEP.) (padops reductase) (3'-phosphoadenylylsulfate reductase) (PAPS sulfotransferase) — —
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_2279 amtB ammonium transporter 0.26 Synpcc7942_2506 par phosphoadenosine phosphosulfate reductase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.23 ABZR88_RS15715 ammonium transporter 0.24 ABZR88_RS04945 phosphoadenylyl-sulfate reductase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_09145 ammonia channel protein 0.23 CA264_02550 phosphoadenosine phosphosulfate reductase — —
Shewanella loihica PV-4 0.13 Shew_0847 Rh family protein/ammonium transporter (RefSeq) 0.21 Shew_0667 phosphoadenosine phosphosulfate reductase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.13 Sama_0651 Rh-like protein/ammonium transporter (RefSeq) 0.22 Sama_2837 phosphoadenosine phosphosulfate reductase (RefSeq) low > 62
Marinobacter adhaerens HP15 0.12 HP15_274 ammonium/methylammonium permease 0.26 HP15_1853 phosphoadenosine phosphosulfate reductase — —
Alteromonas macleodii MIT1002 0.12 MIT1002_00417 Ammonia transporter 0.23 MIT1002_03378 Phosphoadenosine phosphosulfate reductase — —

Not shown: 28 genomes with orthologs for CCNA_01399 only; 1 genomes with orthologs for CCNA_01179 only