| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS06780 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 1.0 | BWI76_RS25225 | | ABC transporter permease | 0.45 | 10 |
| Enterobacter sp. TBS_079 | 0.87 | MPMX20_01065 | | Multidrug efflux pump subunit AcrA | 0.97 | MPMX20_04100 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 85 |
| Enterobacter asburiae PDN3 | 0.84 | EX28DRAFT_2495 | | RND family efflux transporter, MFP subunit | 0.96 | EX28DRAFT_3248 | | ABC transport permease subunit | low | > 76 |
| Escherichia coli ECOR27 | 0.83 | NOLOHH_01135 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.97 | NOLOHH_09780 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 75 |
| Escherichia coli BL21 | 0.83 | ECD_00414 | | multidrug efflux system | 0.97 | ECD_03059 | | ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein | low | > 61 |
| Escherichia coli ECRC102 | 0.83 | NIAGMN_06255 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.97 | NIAGMN_15740 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Escherichia coli ECRC101 | 0.83 | MCAODC_27425 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.97 | MCAODC_08500 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 87 |
| Escherichia coli ECRC62 | 0.83 | BNILDI_22550 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.97 | BNILDI_01755 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 75 |
| Escherichia coli ECRC98 | 0.83 | JDDGAC_11850 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.97 | JDDGAC_21605 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 86 |
| Escherichia coli ECRC99 | 0.83 | KEDOAH_19765 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.97 | KEDOAH_10170 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Escherichia coli BW25113 | 0.83 | b0463 | acrA | multidrug efflux system (NCBI) | 0.97 | b3194 | yrbE | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | 0.35 | 17 |
| Escherichia coli ECRC100 | 0.83 | OKFHMN_08200 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.97 | OKFHMN_17980 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.83 | OHPLBJKB_03211 | | Multidrug efflux pump subunit AcrA | 0.97 | OHPLBJKB_00506 | | putative phospholipid ABC transporter permease protein MlaE | 0.42 | 26 |
| Escherichia coli ECOR38 | 0.82 | HEPCGN_06815 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.97 | HEPCGN_16855 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 87 |
| Escherichia coli Nissle 1917 | 0.82 | ECOLIN_RS02755 | | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.97 | ECOLIN_RS18385 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Escherichia fergusonii Becca | 0.82 | EFB2_03595 | | Multidrug efflux pump subunit AcrA | 0.97 | EFB2_00629 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.78 | GFF4380 | | Membrane fusion protein of RND family multidrug efflux pump | 0.98 | GFF2938 | | Uncharacterized ABC transporter, permease component YrbE | low | > 78 |
| Pantoea sp. MT58 | 0.74 | IAI47_14510 | | efflux RND transporter periplasmic adaptor subunit | 0.88 | IAI47_17140 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 76 |
| Rahnella sp. WP5 | 0.74 | EX31_RS22475 | | efflux RND transporter periplasmic adaptor subunit | 0.88 | EX31_RS12440 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 89 |
| Serratia liquefaciens MT49 | 0.74 | IAI46_05190 | | multidrug efflux RND transporter periplasmic adaptor subunit SdeX | 0.86 | IAI46_22425 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.74 | LU632_RS18180 | | efflux RND transporter periplasmic adaptor subunit | 0.87 | LU632_RS21240 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS05740 | | efflux RND transporter periplasmic adaptor subunit | 0.86 | DDA3937_RS01570 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.39 | 65 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS05795 | | efflux RND transporter periplasmic adaptor subunit | 0.86 | HGI48_RS01485 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 71 |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS06120 | | efflux RND transporter periplasmic adaptor subunit | 0.86 | DZA65_RS01550 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS15735 | | efflux RND transporter periplasmic adaptor subunit | 0.88 | HER17_RS20020 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 75 |
| Pseudomonas fluorescens FW300-N2E2 | 0.51 | Pf6N2E2_2823 | | Multidrug efflux RND membrane fusion protein MexC | 0.62 | Pf6N2E2_3259 | | Uncharacterized ABC transporter, permease component YrbE | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.51 | AO356_04875 | | antibiotic transporter | 0.62 | AO356_07000 | | ABC transporter permease | low | > 104 |
| Pseudomonas syringae pv. syringae B728a | 0.51 | Psyr_4007 | | Secretion protein HlyD | 0.63 | Psyr_4140 | | Protein of unknown function DUF140 | low | > 86 |
| Pseudomonas sp. RS175 | 0.51 | PFR28_00632 | | putative efflux pump periplasmic linker TtgA | 0.61 | PFR28_00180 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.51 | Psyr_4007 | | Secretion protein HlyD | 0.63 | Psyr_4140 | | Protein of unknown function DUF140 | low | > 86 |
| Pseudomonas sp. S08-1 | 0.50 | OH686_16045 | | Multidrug efflux system, membrane fusion component | 0.64 | OH686_08505 | | Phospholipid ABC transporter permease protein MlaE | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_0309 | | RND family efflux transporter, MFP subunit | 0.64 | Psest_3306 | | conserved hypothetical integral membrane protein | 0.26 | 40 |
| Pseudomonas fluorescens SBW25-INTG | 0.48 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | 0.61 | PFLU_RS04435 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.32 | 50 |
| Pseudomonas fluorescens GW456-L13 | 0.48 | PfGW456L13_4580 | | Multidrug efflux RND membrane fusion protein MexC | 0.61 | PfGW456L13_5007 | | Uncharacterized ABC transporter, permease component YrbE | — | — |
| Pseudomonas fluorescens SBW25 | 0.48 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | 0.61 | PFLU_RS04435 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 109 |
| Pseudomonas simiae WCS417 | 0.48 | PS417_06775 | | antibiotic transporter | 0.60 | PS417_04380 | | ABC transporter permease | low | > 88 |
| Pseudomonas putida KT2440 | 0.48 | PP_1386 | | Probable efflux pump periplasmic linker TtgA | 0.62 | PP_0959 | | phospholipid ABC transporter | 0.39 | 13 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_3247 | | Multidrug efflux RND membrane fusion protein MexC | 0.62 | Pf1N1B4_1073 | | Uncharacterized ABC transporter, permease component YrbE | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.1793.1 | | RND efflux system, membrane fusion protein CmeA | 0.44 | Xcc-8004.5365.1 | | Uncharacterized ABC transporter, permease component YrbE | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.47 | HSERO_RS06810 | | hemolysin D | 0.47 | HSERO_RS20395 | | ABC transporter permease | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_17300 | | antibiotic transporter | 0.62 | AO353_05145 | | ABC transporter permease | 0.44 | 32 |
| Azospirillum brasilense Sp245 | 0.46 | AZOBR_RS30180 | | hemolysin D | 0.28 | AZOBR_RS08345 | | ABC transporter permease | low | > 97 |
| Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS29870 | | efflux RND transporter periplasmic adaptor subunit | 0.51 | QEN71_RS27915 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS34600 | | hemolysin D | 0.50 | BPHYT_RS17760 | | ABC transporter permease | low | > 109 |
| Azospirillum sp. SherDot2 | 0.46 | MPMX19_05883 | | Multidrug resistance protein MexA | 0.28 | MPMX19_06141 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 112 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS18280 | | efflux RND transporter periplasmic adaptor subunit | 0.50 | ABZR86_RS11880 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 74 |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS32415 | | hemolysin D | 0.57 | RR42_RS18965 | | ABC transporter permease | low | > 128 |
| Rhodospirillum rubrum S1H | 0.45 | Rru_A2050 | | Secretion protein HlyD (NCBI) | 0.27 | Rru_A0408 | | Protein of unknown function DUF140 (NCBI) | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_01000 | | membrane fusion protein, multidrug efflux system | 0.53 | H281DRAFT_05642 | | phospholipid/cholesterol/gamma-HCH transport system permease protein | low | > 103 |
| Shewanella amazonensis SB2B | 0.44 | Sama_3553 | | multidrug resistance protein AcrA/AcrE family (RefSeq) | 0.70 | Sama_3080 | | hypothetical protein (RefSeq) | low | > 62 |
| Ralstonia solanacearum UW163 | 0.44 | UW163_RS19385 | | efflux RND transporter periplasmic adaptor subunit | 0.53 | UW163_RS06720 | | ABC transporter permease | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.44 | DVU2817 | acrA | multidrug resistance protein (TIGR) | 0.33 | DVU1246 | | membrane protein, putative (TIGR) | low | > 55 |
| Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS19790 | | efflux RND transporter periplasmic adaptor subunit | 0.53 | RALBFv3_RS06895 | | ABC transporter permease | — | — |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS05310 | | efflux RND transporter periplasmic adaptor subunit | 0.54 | ABZR87_RS02550 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.44 | RS_RS21035 | | efflux RND transporter periplasmic adaptor subunit | 0.54 | RS_RS14840 | | ABC transporter permease | low | > 80 |
| Shewanella oneidensis MR-1 | 0.44 | SO4693 | | multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) | 0.70 | SO3953 | | conserved hypothetical protein TIGR00056 (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_4046 | | RND family efflux transporter MFP subunit (RefSeq) | 0.70 | Shewana3_0679 | | hypothetical protein (RefSeq) | low | > 73 |
| Ralstonia solanacearum PSI07 | 0.44 | RPSI07_RS23900 | | efflux RND transporter periplasmic adaptor subunit | 0.53 | RPSI07_RS10340 | | ABC transporter permease | 0.50 | 45 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_00690 | | Multidrug efflux pump subunit AcrA | 0.59 | MPMX26_02740 | | Intermembrane phospholipid transport system permease protein MlaE | low | > 36 |
| Variovorax sp. OAS795 | 0.38 | ABID97_RS00320 | | efflux RND transporter periplasmic adaptor subunit | 0.52 | ABID97_RS23210 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | 0.53 | 22 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.38 | GFF5686 | | RND efflux system, membrane fusion protein CmeA | 0.47 | GFF1324 | | Uncharacterized ABC transporter, permease component YrbE | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.34 | Ac3H11_4449 | | RND efflux system, membrane fusion protein CmeA | 0.52 | Ac3H11_4713 | | Uncharacterized ABC transporter, permease component YrbE | low | > 79 |
| Rhodanobacter sp. FW510-T8 | 0.34 | OKGIIK_09165 | acrA | efflux transporter periplasmic adaptor subunit | 0.50 | OKGIIK_12130 | mlaE | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 52 |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS04230 | | efflux RND transporter periplasmic adaptor subunit | 0.52 | ABCV34_RS11185 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.31 | LRK54_RS02095 | | efflux RND transporter periplasmic adaptor subunit | 0.50 | LRK54_RS11765 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.31 | LRK55_RS01870 | | efflux RND transporter periplasmic adaptor subunit | 0.50 | LRK55_RS11490 | | lipid asymmetry maintenance ABC transporter permease subunit MlaE | low | > 63 |
| Lysobacter sp. OAE881 | 0.30 | ABIE51_RS17985 | | efflux RND transporter periplasmic adaptor subunit | 0.37 | ABIE51_RS01010 | | MlaE family lipid ABC transporter permease subunit | low | > 62 |
| Desulfovibrio vulgaris Miyazaki F | 0.28 | DvMF_2164 | | efflux transporter, RND family, MFP subunit (RefSeq) | 0.34 | DvMF_0852 | | protein of unknown function DUF140 (RefSeq) | low | > 51 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.20 | CA265_RS23015 | | efflux transporter periplasmic adaptor subunit | 0.19 | CA265_RS16015 | | ABC transporter permease | 0.26 | 65 |
Not shown: 5 genomes with orthologs for BWI76_RS06780 only; 20 genomes with orthologs for BWI76_RS25225 only