Conservation of cofitness between BWI76_RS26610 and BWI76_RS02505 in Klebsiella michiganensis M5al

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Klebsiella michiganensis M5al 1.0 BWI76_RS26610 oligopeptidase A 1.0 BWI76_RS02505 tRNA epoxyqueuosine(34) reductase QueG 0.30 11
Enterobacter asburiae PDN3 0.94 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.92 EX28DRAFT_3363 epoxyqueuosine reductase low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_04397 Oligopeptidase A 0.92 MPMX20_00447 Epoxyqueuosine reductase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.89 GFF819 Epoxyqueuosine (oQ) reductase QueG low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_00205 Oligopeptidase A 0.89 OHPLBJKB_03876 Epoxyqueuosine reductase low > 73
Escherichia coli ECOR38 0.92 HEPCGN_15325 prlC oligopeptidase A 0.89 HEPCGN_10515 queG tRNA epoxyqueuosine(34) reductase QueG low > 87
Escherichia coli BW25113 0.92 b3498 prlC oligopeptidase A (NCBI) 0.89 b4166 yjeS predicted Fe-S electron transport protein (NCBI) low > 76
Escherichia coli ECRC101 0.92 MCAODC_06930 prlC oligopeptidase A 0.89 MCAODC_02800 queG tRNA epoxyqueuosine(34) reductase QueG low > 87
Escherichia coli ECRC100 0.92 OKFHMN_16415 prlC oligopeptidase A 0.89 OKFHMN_12285 queG tRNA epoxyqueuosine(34) reductase QueG low > 80
Escherichia coli ECRC98 0.92 JDDGAC_20045 prlC oligopeptidase A 0.89 JDDGAC_15925 queG tRNA epoxyqueuosine(34) reductase QueG low > 86
Escherichia coli ECRC99 0.92 KEDOAH_11730 prlC oligopeptidase A 0.89 KEDOAH_15870 queG tRNA epoxyqueuosine(34) reductase QueG
Escherichia coli ECRC102 0.92 NIAGMN_14180 prlC oligopeptidase A 0.89 NIAGMN_10135 queG tRNA epoxyqueuosine(34) reductase QueG
Escherichia fergusonii Becca 0.92 EFB2_00317 Oligopeptidase A 0.89 EFB2_04369 Epoxyqueuosine reductase low > 86
Escherichia coli Nissle 1917 0.92 ECOLIN_RS19985 oligopeptidase A 0.89 ECOLIN_RS24200 tRNA epoxyqueuosine(34) reductase QueG low > 55
Escherichia coli BL21 0.92 ECD_03347 oligopeptidase A 0.89 ECD_04033 epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis low > 61
Escherichia coli ECRC62 0.92 BNILDI_03210 prlC oligopeptidase A 0.89 BNILDI_06940 queG tRNA epoxyqueuosine(34) reductase QueG low > 75
Escherichia coli ECOR27 0.92 NOLOHH_08350 prlC oligopeptidase A 0.89 NOLOHH_04550 queG tRNA epoxyqueuosine(34) reductase QueG low > 75
Pantoea sp. MT58 0.86 IAI47_01345 oligopeptidase A 0.82 IAI47_02560 tRNA epoxyqueuosine(34) reductase QueG low > 76
Pectobacterium carotovorum WPP14 0.85 HER17_RS21300 oligopeptidase A 0.79 HER17_RS02555 tRNA epoxyqueuosine(34) reductase QueG low > 75
Dickeya dadantii 3937 0.83 DDA3937_RS21265 oligopeptidase A 0.81 DDA3937_RS18645 tRNA epoxyqueuosine(34) reductase QueG low > 74
Dickeya dianthicola ME23 0.83 DZA65_RS00035 oligopeptidase A 0.78 DZA65_RS19710 tRNA epoxyqueuosine(34) reductase QueG low > 75
Serratia liquefaciens MT49 0.83 IAI46_24210 oligopeptidase A 0.82 IAI46_01595 tRNA epoxyqueuosine(34) reductase QueG low > 86
Dickeya dianthicola 67-19 0.82 HGI48_RS00045 oligopeptidase A 0.79 HGI48_RS18575 tRNA epoxyqueuosine(34) reductase QueG low > 71
Rahnella sp. WP5 0.81 EX31_RS05165 oligopeptidase A 0.80 EX31_RS08850 tRNA epoxyqueuosine(34) reductase QueG low > 89
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_01010 oligopeptidase A 0.64 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG low > 62
Shewanella loihica PV-4 0.66 Shew_3657 oligopeptidase A (RefSeq) 0.65 Shew_2979 putative iron-sulfur cluster binding protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.65 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.67 SO3861 iron-sulfur cluster-binding protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.65 Shewana3_4051 oligopeptidase A (RefSeq) 0.66 Shewana3_0745 putative iron-sulfur cluster binding protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.65 Sama_3546 oligopeptidase A (RefSeq) 0.63 Sama_2625 iron-sulfur cluster-binding protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.63 MIT1002_03633 Oligopeptidase A 0.65 MIT1002_03794 Epoxyqueuosine reductase low > 70
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_0457 Zn-dependent oligopeptidases 0.47 B158DRAFT_0486 iron-sulfur cluster binding protein, putative low > 40
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.56 Psyr_0566 4Fe-4S cluster binding protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.56 Psyr_0566 4Fe-4S cluster binding protein low > 86
Pseudomonas sp. RS175 0.58 PFR28_04699 Oligopeptidase A 0.56 PFR28_05115 Epoxyqueuosine reductase 0.24 80
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.56 Pf6N2E2_3620 Epoxyqueuosine (oQ) reductase QueG low > 103
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_11120 oligopeptidase A 0.56 AO356_08685 epoxyqueuosine reductase low > 104
Marinobacter adhaerens HP15 0.57 HP15_3759 oligopeptidase A-like protein 0.49 HP15_2505 iron-sulfur cluster binding protein low > 73
Pseudomonas simiae WCS417 0.57 PS417_00245 oligopeptidase A 0.57 PS417_02460 epoxyqueuosine reductase low > 88
Pseudomonas fluorescens SBW25 0.57 PFLU_RS00240 oligopeptidase A 0.57 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG low > 109
Pseudomonas stutzeri RCH2 0.57 Psest_4320 Zn-dependent oligopeptidases 0.54 Psest_0677 iron-sulfur cluster binding protein, putative low > 67
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS00240 oligopeptidase A 0.57 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG low > 109
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.56 Pf1N1B4_1418 Epoxyqueuosine (oQ) reductase QueG low > 87
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_10775 oligopeptidase A 0.55 AO353_13115 epoxyqueuosine reductase low > 101
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.56 PfGW456L13_160 Epoxyqueuosine (oQ) reductase QueG low > 87
Pseudomonas putida KT2440 0.56 PP_0096 oligopeptidase A 0.52 PP_4900 epoxyqueuosine reductase low > 96
Pseudomonas sp. S08-1 0.56 OH686_12360 Oligopeptidase A 0.56 OH686_09500 epoxyqueuosine reductase low > 80
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS14940 M3 family metallopeptidase 0.53 ABZR86_RS00835 tRNA epoxyqueuosine(34) reductase QueG low > 74
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_15380 dcp oligopeptidase A 0.54 OKGIIK_03900 queG tRNA epoxyqueuosine(34) reductase QueG low > 52
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS05695 M3 family metallopeptidase 0.49 QEN71_RS02745 tRNA epoxyqueuosine(34) reductase QueG low > 153
Dechlorosoma suillum PS 0.48 Dsui_0046 Zn-dependent oligopeptidase 0.47 Dsui_3502 iron-sulfur cluster binding protein, putative low > 51
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS07290 oligopeptidase A 0.53 HSERO_RS04220 epoxyqueuosine reductase low > 78
Rhodanobacter denitrificans MT42 0.47 LRK55_RS08380 M3 family metallopeptidase 0.54 LRK55_RS14845 tRNA epoxyqueuosine(34) reductase QueG low > 63
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS08615 M3 family metallopeptidase 0.54 LRK54_RS15130 tRNA epoxyqueuosine(34) reductase QueG low > 59
Paraburkholderia graminis OAS925 0.47 ABIE53_002798 oligopeptidase A 0.49 ABIE53_003363 epoxyqueuosine reductase 0.34 78
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS12875 oligopeptidase A 0.48 BPHYT_RS15960 iron-sulfur cluster binding protein low > 109
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS01690 oligopeptidase A 0.48 RALBFv3_RS05120 tRNA epoxyqueuosine(34) reductase QueG low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS15000 oligopeptidase A 0.48 UW163_RS08505 tRNA epoxyqueuosine(34) reductase QueG
Ralstonia solanacearum PSI07 0.46 RPSI07_RS15795 oligopeptidase A 0.48 RPSI07_RS12175 tRNA epoxyqueuosine(34) reductase QueG low > 81
Ralstonia solanacearum GMI1000 0.46 RS_RS08035 oligopeptidase A 0.48 RS_RS12740 tRNA epoxyqueuosine(34) reductase QueG low > 80
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS07340 oligopeptidase A 0.48 RR42_RS03405 epoxyqueuosine reductase low > 128
Acinetobacter radioresistens SK82 0.46 MPMX26_02685 Oligopeptidase A 0.45 MPMX26_01783 Epoxyqueuosine reductase low > 36
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A 0.49 H281DRAFT_04128 epoxyqueuosine reductase low > 103
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) 0.51 Xcc-8004.2252.1 Epoxyqueuosine (oQ) reductase QueG low > 74
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS13490 M3 family metallopeptidase 0.48 ABZR87_RS00775 tRNA epoxyqueuosine(34) reductase QueG low > 80
Variovorax sp. OAS795 0.44 ABID97_RS14080 M3 family metallopeptidase 0.48 ABID97_RS20285 tRNA epoxyqueuosine(34) reductase QueG low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.52 GFF5474 Epoxyqueuosine (oQ) reductase QueG low > 90
Variovorax sp. SCN45 0.43 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.45 GFF4805 Epoxyqueuosine reductase (EC 1.17.99.6) QueG low > 127
Acidovorax sp. GW101-3H11 0.43 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.49 Ac3H11_306 Epoxyqueuosine (oQ) reductase QueG low > 79
Castellaniella sp019104865 MT123 0.43 ABCV34_RS04180 M3 family metallopeptidase 0.49 ABCV34_RS13905 tRNA epoxyqueuosine(34) reductase QueG
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_2572 Zn-dependent oligopeptidases 0.31 Echvi_0824 iron-sulfur cluster binding protein, putative low > 79
Dinoroseobacter shibae DFL-12 0.24 Dshi_2973 Peptidyl-dipeptidase Dcp (RefSeq) 0.30 Dshi_3307 domain of unknown function DUF1730 (RefSeq) low > 64

Not shown: 6 genomes with orthologs for BWI76_RS26610 only; 11 genomes with orthologs for BWI76_RS02505 only