| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS19340 | | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | 1.0 | BPHYT_RS19330 | | glycine cleavage system P protein (EC 1.4.4.2) (from data) | 0.54 | 1 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.97 | H281DRAFT_02407 | | L-serine ammonia-lyase | 0.93 | H281DRAFT_02409 | | glycine dehydrogenase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.97 | ABIE53_000240 | | L-serine dehydratase | 0.94 | ABIE53_000238 | | glycine dehydrogenase | 0.30 | 7 |
| Paraburkholderia sabiae LMG 24235 | 0.93 | QEN71_RS29225 | | L-serine ammonia-lyase | 0.88 | QEN71_RS29215 | | aminomethyl-transferring glycine dehydrogenase | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.80 | RPSI07_RS08570 | | L-serine ammonia-lyase | 0.70 | RPSI07_RS08575 | | glycine dehydrogenase (aminomethyl-transferring) | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.78 | RR42_RS20080 | | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | 0.71 | RR42_RS20070 | | glycine dehydrogenase | 0.56 | 2 |
| Ralstonia solanacearum GMI1000 | 0.78 | RS_RS16515 | | L-serine ammonia-lyase | 0.69 | RS_RS16510 | | glycine dehydrogenase | 0.37 | 58 |
| Ralstonia sp. UNC404CL21Col | 0.77 | ABZR87_RS03940 | | L-serine ammonia-lyase | 0.69 | ABZR87_RS03935 | | aminomethyl-transferring glycine dehydrogenase | 0.80 | 5 |
| Ralstonia solanacearum IBSBF1503 | 0.77 | RALBFv3_RS08665 | | L-serine ammonia-lyase | 0.70 | RALBFv3_RS08660 | | glycine dehydrogenase (aminomethyl-transferring) | low | > 76 |
| Ralstonia solanacearum UW163 | 0.77 | UW163_RS04945 | | L-serine ammonia-lyase | 0.70 | UW163_RS04950 | | glycine dehydrogenase (aminomethyl-transferring) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.68 | Pf1N1B4_622 | | L-serine dehydratase (EC 4.3.1.17) | 0.62 | Pf1N1B4_621 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | low | > 87 |
| Pseudomonas putida KT2440 | 0.68 | PP_0987 | | L-serine dehydratase | 0.60 | PP_0988 | | glycine dehydrogenase | 0.53 | 2 |
| Pseudomonas fluorescens FW300-N2E2 | 0.68 | Pf6N2E2_5557 | | L-serine ammonia-lyase (EC 4.3.1.17) (from data) | 0.62 | Pf6N2E2_5558 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | 0.62 | 1 |
| Pseudomonas fluorescens GW456-L13 | 0.68 | PfGW456L13_1867 | | L-serine dehydratase (EC 4.3.1.17) | 0.62 | PfGW456L13_1868 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | 0.63 | 2 |
| Pseudomonas sp. RS175 | 0.68 | PFR28_03384 | | L-serine dehydratase 2 | 0.61 | PFR28_03383 | | Glycine dehydrogenase (decarboxylating) | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.67 | AO353_03505 | | serine dehydratase | 0.62 | AO353_03500 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | 0.49 | 1 |
| Pseudomonas fluorescens FW300-N2C3 | 0.67 | AO356_18165 | | serine dehydratase | 0.61 | AO356_18170 | | glycine dehydrogenase | 0.52 | 2 |
| Pseudomonas sp. S08-1 | 0.67 | OH686_16810 | | L-serine ammonia-lyase | 0.58 | OH686_11165 | | glycine dehydrogenase | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.67 | PFLU_RS24005 | | L-serine ammonia-lyase | 0.61 | PFLU_RS24000 | | aminomethyl-transferring glycine dehydrogenase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.67 | PFLU_RS24005 | | L-serine ammonia-lyase | 0.61 | PFLU_RS24000 | | aminomethyl-transferring glycine dehydrogenase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.66 | PS417_22365 | | serine dehydratase | 0.61 | PS417_22360 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | 0.30 | 2 |
| Pseudomonas stutzeri RCH2 | 0.65 | Psest_0784 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | 0.57 | Psest_0183 | | glycine dehydrogenase (decarboxylating) | low | > 67 |
| Dyella japonica UNC79MFTsu3.2 | 0.64 | ABZR86_RS19060 | | L-serine ammonia-lyase | 0.63 | ABZR86_RS08305 | | aminomethyl-transferring glycine dehydrogenase | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.64 | LRK55_RS05035 | | L-serine ammonia-lyase | 0.61 | LRK55_RS00260 | | aminomethyl-transferring glycine dehydrogenase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.64 | LRK54_RS05255 | | L-serine ammonia-lyase | 0.61 | LRK54_RS00520 | | aminomethyl-transferring glycine dehydrogenase | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.64 | OKGIIK_01565 | sdaA | L-serine ammonia-lyase | 0.61 | OKGIIK_06740 | gcvP2 | Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain | low | > 52 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.63 | Xcc-8004.1601.1 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | 0.61 | Xcc-8004.3878.1 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | low | > 74 |
| Lysobacter sp. OAE881 | 0.63 | ABIE51_RS16145 | | L-serine ammonia-lyase | 0.61 | ABIE51_RS14345 | | aminomethyl-transferring glycine dehydrogenase | low | > 62 |
| Variovorax sp. SCN45 | 0.61 | GFF3439 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | 0.61 | GFF6478 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | low | > 127 |
| Kangiella aquimarina DSM 16071 | 0.61 | B158DRAFT_1339 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | 0.54 | B158DRAFT_0545 | | glycine dehydrogenase (decarboxylating) | — | — |
| Castellaniella sp019104865 MT123 | 0.58 | ABCV34_RS14845 | | L-serine ammonia-lyase | 0.57 | ABCV34_RS08835 | | aminomethyl-transferring glycine dehydrogenase | low | > 48 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.55 | Psyr_3522 | | L-serine ammonia-lyase | 0.61 | Psyr_1096 | | glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.55 | Psyr_3522 | | L-serine ammonia-lyase | 0.61 | Psyr_1096 | | glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit | low | > 86 |
| Shewanella loihica PV-4 | 0.55 | Shew_1625 | | L-serine dehydratase 1 (RefSeq) | 0.56 | Shew_3062 | | glycine dehydrogenase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_2295 | | L-serine ammonia-lyase (RefSeq) | 0.57 | Shewana3_3499 | | glycine dehydrogenase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.55 | SO2248 | sdaA | L-serine dehydratase 1 (NCBI ptt file) | 0.57 | SO0781 | gcvP | glycine cleavage system P protein (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.53 | Sama_1325 | | L-serine ammonia-lyase (RefSeq) | 0.56 | Sama_2719 | | glycine dehydrogenase (RefSeq) | low | > 62 |
| Rahnella sp. WP5 | 0.51 | EX31_RS24715 | | L-serine ammonia-lyase | 0.54 | EX31_RS21520 | | aminomethyl-transferring glycine dehydrogenase | low | > 89 |
| Dickeya dadantii 3937 | 0.50 | DDA3937_RS11265 | | L-serine ammonia-lyase | 0.55 | DDA3937_RS03255 | | aminomethyl-transferring glycine dehydrogenase | low | > 74 |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_01515 | sdaA | L-serine ammonia-lyase | 0.55 | NIAGMN_17295 | gcvP | aminomethyl-transferring glycine dehydrogenase | — | — |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_01125 | sdaA | L-serine ammonia-lyase | 0.55 | JDDGAC_23170 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 86 |
| Escherichia coli ECRC100 | 0.50 | OKFHMN_26550 | sdaA | L-serine ammonia-lyase | 0.55 | OKFHMN_19530 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 80 |
| Escherichia coli ECRC101 | 0.50 | MCAODC_18860 | sdaA | L-serine ammonia-lyase | 0.55 | MCAODC_10050 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 87 |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_01560 | sdaA | L-serine ammonia-lyase | 0.55 | KEDOAH_08610 | gcvP | aminomethyl-transferring glycine dehydrogenase | — | — |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_04940 | sdaA | L-serine ammonia-lyase | 0.55 | HEPCGN_18820 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 87 |
| Escherichia coli BW25113 | 0.50 | b1814 | sdaA | L-serine deaminase I (NCBI) | 0.55 | b2903 | gcvP | glycine dehydrogenase (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS10090 | | L-serine ammonia-lyase | 0.55 | ECOLIN_RS16165 | | aminomethyl-transferring glycine dehydrogenase | — | — |
| Escherichia coli BL21 | 0.50 | ECD_01784 | | L-serine dehydratase 1 | 0.55 | ECD_02735 | | glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_01917 | | L-serine dehydratase 1 | 0.55 | OHPLBJKB_00812 | | Glycine dehydrogenase (decarboxylating) | low | > 73 |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_17070 | sdaA | L-serine ammonia-lyase | 0.55 | NOLOHH_11445 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 75 |
| Escherichia coli ECRC62 | 0.50 | BNILDI_15855 | sdaA | L-serine ammonia-lyase | 0.55 | BNILDI_09980 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 75 |
| Escherichia fergusonii Becca | 0.50 | EFB2_02186 | | L-serine dehydratase 1 | 0.55 | EFB2_00999 | | Glycine dehydrogenase (decarboxylating) | low | > 86 |
| Dickeya dianthicola ME23 | 0.50 | DZA65_RS11645 | | L-serine ammonia-lyase | 0.55 | DZA65_RS03445 | | aminomethyl-transferring glycine dehydrogenase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.50 | HGI48_RS11300 | | L-serine ammonia-lyase | 0.55 | HGI48_RS03400 | | aminomethyl-transferring glycine dehydrogenase | low | > 71 |
| Erwinia tracheiphila SCR3 | 0.49 | LU632_RS13185 | sdaA | L-serine ammonia-lyase | 0.54 | LU632_RS05915 | gcvP | aminomethyl-transferring glycine dehydrogenase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.49 | HER17_RS11315 | | L-serine ammonia-lyase | 0.55 | HER17_RS17995 | | aminomethyl-transferring glycine dehydrogenase | low | > 75 |
| Klebsiella michiganensis M5al | 0.49 | BWI76_RS17875 | | L-serine ammonia-lyase | 0.55 | BWI76_RS23870 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | low | > 92 |
| Serratia liquefaciens MT49 | 0.49 | IAI46_14795 | | L-serine ammonia-lyase | 0.55 | IAI46_20850 | | aminomethyl-transferring glycine dehydrogenase | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.49 | GFF3206 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | 0.55 | GFF3003 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | 0.42 | 35 |
| Enterobacter asburiae PDN3 | 0.49 | EX28DRAFT_0745 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | 0.55 | EX28DRAFT_2955 | | glycine dehydrogenase (decarboxylating) | low | > 76 |
| Pantoea sp. MT58 | 0.49 | IAI47_08785 | | L-serine ammonia-lyase | 0.55 | IAI47_03775 | | aminomethyl-transferring glycine dehydrogenase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.49 | MPMX20_02719 | | L-serine dehydratase 1 | 0.55 | MPMX20_03762 | | Glycine dehydrogenase (decarboxylating) | 0.17 | 50 |
| Vibrio cholerae E7946 ATCC 55056 | 0.49 | CSW01_06565 | | L-serine ammonia-lyase | 0.56 | CSW01_15330 | | glycine dehydrogenase (decarboxylating) | low | > 62 |
| Rhizobium sp. OAE497 | 0.47 | ABIE40_RS09785 | | L-serine ammonia-lyase | 0.55 | ABIE40_RS09950 | | aminomethyl-transferring glycine dehydrogenase | low | > 107 |
| Mycobacterium tuberculosis H37Rv | 0.46 | Rv0069c | | Probable L-serine dehydratase SdaA (L-serine deaminase) (SDH) (L-SD) | 0.52 | Rv1832 | | Probable glycine dehydrogenase GcvB (glycine decarboxylase) (glycine cleavage system P-protein) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.44 | PGA1_c23770 | | L-serine dehydratase TdcG | 0.55 | PGA1_78p00310 | | glycine dehydrogenase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.31 | BT4678 | | L-serine dehydratase (NCBI ptt file) | 0.48 | BT1147 | | glycine dehydrogenase [decarboxylating] (NCBI ptt file) | low | > 81 |
| Bacteroides ovatus ATCC 8483 | 0.30 | BACOVA_05536 | | L-serine ammonia-lyase | 0.49 | BACOVA_04038 | | glycine dehydrogenase | low | > 94 |
| Phocaeicola vulgatus CL09T03C04 | 0.30 | HMPREF1058_RS16410 | | L-serine ammonia-lyase | 0.49 | HMPREF1058_RS18780 | | aminomethyl-transferring glycine dehydrogenase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.29 | ABI39_RS12245 | | L-serine ammonia-lyase | 0.49 | ABI39_RS15100 | | aminomethyl-transferring glycine dehydrogenase | low | > 72 |
| Bacteroides stercoris CC31F | 0.29 | HMPREF1181_RS11755 | | L-serine ammonia-lyase | 0.49 | HMPREF1181_RS16815 | | aminomethyl-transferring glycine dehydrogenase | low | > 56 |
Not shown: 4 genomes with orthologs for BPHYT_RS19340 only; 15 genomes with orthologs for BPHYT_RS19330 only