| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS18705 | | 5,10-methylenetetrahydrofolate reductase | 1.0 | BPHYT_RS17890 | | shikimate kinase | 0.53 | 20 |
| Paraburkholderia graminis OAS925 | 0.97 | ABIE53_000061 | | methylenetetrahydrofolate reductase (NADPH) | 0.97 | ABIE53_003741 | | shikimate kinase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.96 | H281DRAFT_05801 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) | 0.98 | H281DRAFT_05614 | | shikimate kinase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.92 | QEN71_RS28715 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.92 | QEN71_RS28040 | | shikimate kinase | 0.90 | 18 |
| Ralstonia solanacearum GMI1000 | 0.80 | RS_RS00460 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.71 | RS_RS14885 | | shikimate kinase | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.80 | RR42_RS01385 | | 5,10-methylenetetrahydrofolate reductase | 0.72 | RR42_RS19010 | | shikimate kinase | 0.65 | 29 |
| Ralstonia solanacearum IBSBF1503 | 0.79 | RALBFv3_RS09875 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.70 | RALBFv3_RS06940 | | shikimate kinase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.79 | UW163_RS03705 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.70 | UW163_RS06675 | | shikimate kinase | — | — |
| Ralstonia solanacearum PSI07 | 0.79 | RPSI07_RS23495 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.70 | RPSI07_RS10295 | | shikimate kinase | 0.54 | 71 |
| Ralstonia sp. UNC404CL21Col | 0.79 | ABZR87_RS04865 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.74 | ABZR87_RS02595 | | shikimate kinase | 0.75 | 14 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.65 | GFF1692 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.56 | GFF1332 | | Shikimate kinase I (EC 2.7.1.71) | — | — |
| Dechlorosoma suillum PS | 0.64 | Dsui_0640 | | 5,10-methylenetetrahydrofolate reductase | 0.53 | Dsui_1094 | | shikimate kinase | — | — |
| Variovorax sp. SCN45 | 0.63 | GFF2055 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.44 | GFF5324 | | Shikimate kinase I (EC 2.7.1.71) | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.63 | Ac3H11_3045 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.49 | Ac3H11_3449 | | Shikimate kinase I (EC 2.7.1.71) | 0.90 | 7 |
| Marinobacter adhaerens HP15 | 0.62 | HP15_2917 | | 5,10-methylenetetrahydrofolate reductase-like protein | 0.40 | HP15_479 | | shikimate kinase I | — | — |
| Variovorax sp. OAS795 | 0.62 | ABID97_RS25015 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.48 | ABID97_RS23260 | | shikimate kinase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_13605 | | 5,10-methylenetetrahydrofolate reductase | 0.43 | AO356_09390 | | shikimate kinase | — | — |
| Pseudomonas sp. S08-1 | 0.60 | OH686_10820 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.44 | OH686_10020 | | Shikimate kinase I | 0.74 | 20 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.44 | PFLU_RS02025 | | shikimate kinase AroK | — | — |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.44 | PFLU_RS02025 | | shikimate kinase AroK | — | — |
| Pseudomonas simiae WCS417 | 0.59 | PS417_26510 | | 5,10-methylenetetrahydrofolate reductase | 0.44 | PS417_01980 | | shikimate kinase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.59 | AO353_08015 | | 5,10-methylenetetrahydrofolate reductase | 0.43 | AO353_12500 | | shikimate kinase | 0.64 | 55 |
| Pseudomonas putida KT2440 | 0.59 | PP_4977 | | 5,10-methylenetetrahydrofolate reductase | 0.43 | PP_5079 | | Shikimate kinase | — | — |
| Castellaniella sp019104865 MT123 | 0.58 | ABCV34_RS13550 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.42 | ABCV34_RS12700 | | shikimate kinase | — | — |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_0313 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.47 | Psest_3714 | | Shikimate kinase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.58 | ABZR86_RS11570 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.37 | ABZR86_RS10475 | | shikimate kinase | 0.96 | 13 |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | 0.44 | Psyr_0408 | | shikimate kinase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | 0.44 | Psyr_0408 | | shikimate kinase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.57 | Xcc-8004.4336.1 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.32 | Xcc-8004.1616.1 | | Shikimate kinase I (EC 2.7.1.71) | low | > 74 |
| Acinetobacter radioresistens SK82 | 0.50 | MPMX26_01002 | | 5,10-methylenetetrahydrofolate reductase | 0.49 | MPMX26_02811 | | Shikimate kinase 1 | — | — |
| Serratia liquefaciens MT49 | 0.43 | IAI46_24530 | | methylenetetrahydrofolate reductase | 0.43 | IAI46_23705 | | shikimate kinase AroK | — | — |
| Rahnella sp. WP5 | 0.43 | EX31_RS14205 | | methylenetetrahydrofolate reductase | 0.44 | EX31_RS04725 | | shikimate kinase AroK | low | > 89 |
| Enterobacter sp. TBS_079 | 0.42 | MPMX20_04529 | | 5,10-methylenetetrahydrofolate reductase | 0.44 | MPMX20_04279 | | Shikimate kinase 1 | low | > 85 |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS20415 | | methylenetetrahydrofolate reductase | 0.38 | HGI48_RS19680 | | shikimate kinase AroK | — | — |
| Dickeya dadantii 3937 | 0.42 | DDA3937_RS00960 | | methylenetetrahydrofolate reductase | 0.38 | DDA3937_RS19550 | | shikimate kinase AroK | — | — |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS21460 | | methylenetetrahydrofolate reductase | 0.38 | DZA65_RS20765 | | shikimate kinase AroK | — | — |
| Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS00950 | | methylenetetrahydrofolate reductase | 0.44 | HER17_RS01775 | | shikimate kinase AroK | — | — |
| Klebsiella michiganensis M5al | 0.42 | BWI76_RS00805 | | 5,10-methylenetetrahydrofolate reductase | 0.43 | BWI76_RS26090 | | shikimate kinase | — | — |
| Enterobacter asburiae PDN3 | 0.42 | EX28DRAFT_4413 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.44 | EX28DRAFT_4152 | | shikimate kinase (EC 2.7.1.71) | low | > 76 |
| Pantoea sp. MT58 | 0.42 | IAI47_00890 | | methylenetetrahydrofolate reductase | 0.43 | IAI47_01890 | | shikimate kinase AroK | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.42 | OHPLBJKB_04109 | | 5,10-methylenetetrahydrofolate reductase | 0.43 | OHPLBJKB_00313 | | Shikimate kinase 1 | — | — |
| Escherichia coli BW25113 | 0.42 | b3941 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI) | 0.43 | b3390 | aroK | shikimate kinase I (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.42 | HEPCGN_12310 | metF | methylenetetrahydrofolate reductase | 0.43 | HEPCGN_15930 | aroK | shikimate kinase AroK | low | > 87 |
| Escherichia coli BL21 | 0.42 | ECD_03827 | | 5,10-methylenetetrahydrofolate reductase | 0.43 | ECD_03242 | | shikimate kinase I | low | > 61 |
| Escherichia coli ECOR27 | 0.42 | NOLOHH_05810 | metF | methylenetetrahydrofolate reductase | 0.43 | NOLOHH_08900 | aroK | shikimate kinase AroK | low | > 75 |
| Escherichia coli ECRC62 | 0.42 | BNILDI_05725 | metF | methylenetetrahydrofolate reductase | 0.43 | BNILDI_02620 | aroK | shikimate kinase AroK | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.41 | GFF2329 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.40 | GFF629 | | Shikimate kinase I (EC 2.7.1.71) | low | > 78 |
| Escherichia fergusonii Becca | 0.41 | EFB2_04672 | | 5,10-methylenetetrahydrofolate reductase | 0.43 | EFB2_00438 | | Shikimate kinase 1 | low | > 86 |
| Escherichia coli Nissle 1917 | 0.41 | ECOLIN_RS22760 | | methylenetetrahydrofolate reductase | 0.43 | ECOLIN_RS19365 | | shikimate kinase AroK | — | — |
| Erwinia tracheiphila SCR3 | 0.41 | LU632_RS19630 | metF | methylenetetrahydrofolate reductase | 0.44 | LU632_RS22870 | aroK | shikimate kinase AroK | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.39 | Ga0059261_0992 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.31 | Ga0059261_3592 | | shikimate kinase (EC 2.7.1.71) | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.38 | CSW01_13560 | | methylenetetrahydrofolate reductase | 0.44 | CSW01_13305 | | shikimate kinase | low | > 62 |
| Shewanella amazonensis SB2B | 0.38 | Sama_3169 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.45 | Sama_3368 | aroK | shikimate kinase I (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.38 | Shew_0522 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.45 | Shew_0213 | | shikimate kinase I (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.37 | MIT1002_03670 | | 5,10-methylenetetrahydrofolate reductase | 0.45 | MIT1002_00448 | | Shikimate kinase 1 | — | — |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_3612 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.44 | Shewana3_3894 | aroK | shikimate kinase I (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.36 | SO4054 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | 0.45 | SO0286 | aroK | shikimate kinase (NCBI ptt file) | — | — |
| Kangiella aquimarina DSM 16071 | 0.36 | B158DRAFT_2461 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) | 0.43 | B158DRAFT_0763 | | shikimate kinase (EC 2.7.1.71) | — | — |
| Caulobacter crescentus NA1000 | 0.36 | CCNA_02224 | | methylenetetrahydrofolate reductase | 0.29 | CCNA_03103 | | shikimate kinase (EC 2.7.1.71) (from data) | 0.91 | 34 |
| Caulobacter crescentus NA1000 Δfur | 0.36 | CCNA_02224 | | methylenetetrahydrofolate reductase | 0.29 | CCNA_03103 | | shikimate kinase | low | > 67 |
| Phaeobacter inhibens DSM 17395 | 0.35 | PGA1_c11700 | | 5,10-methylenetetrahydrofolate reductase MetF | 0.40 | PGA1_c14090 | | shikimate kinase AroK | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.35 | DVU0997 | metF | 5,10-methylenetetrahydrofolate reductase (TIGR) | 0.23 | DVU0892 | aroK-1 | shikimate kinase (TIGR) | low | > 55 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.35 | A4249_RS07925 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.30 | A4249_RS04170 | | shikimate kinase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.33 | DvMF_3034 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.27 | DvMF_1410 | | Shikimate kinase (RefSeq) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.30 | Dshi_2080 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.37 | Dshi_1609 | | Shikimate kinase (RefSeq) | — | — |
| Fusobacterium nucleatum SB010 | 0.30 | HUW76_02285 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.27 | HUW76_07055 | | shikimate kinase | low | > 35 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.20 | ABZR88_RS20935 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.21 | ABZR88_RS19855 | | shikimate kinase | — | — |
Not shown: 33 genomes with orthologs for BPHYT_RS18705 only; 1 genomes with orthologs for BPHYT_RS17890 only