| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS33580 | | geranyltranstransferase | 1.0 | BPHYT_RS15415 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | 0.45 | 6 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.96 | H281DRAFT_06016 | | farnesyl-diphosphate synthase | 0.93 | H281DRAFT_04026 | | 3-octaprenyl-4hydroxybenzoate decarboxylase | — | — |
| Paraburkholderia graminis OAS925 | 0.95 | ABIE53_004858 | | farnesyl diphosphate synthase | 0.94 | ABIE53_003251 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | 0.46 | 87 |
| Paraburkholderia sabiae LMG 24235 | 0.86 | QEN71_RS15235 | | polyprenyl synthetase family protein | 0.92 | QEN71_RS03260 | | UbiD family decarboxylase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS19130 | | geranyl transferase | 0.75 | HSERO_RS17875 | | 3-polyprenyl-4-hydroxybenzoate decarboxylase | — | — |
| Dechlorosoma suillum PS | 0.57 | Dsui_3509 | | geranylgeranyl pyrophosphate synthase | 0.72 | Dsui_0302 | | UbiD family decarboxylase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.57 | RR42_RS15010 | | geranyl transferase | 0.74 | RR42_RS15590 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.56 | ABZR87_RS15640 | | polyprenyl synthetase family protein | 0.76 | ABZR87_RS08850 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Ralstonia solanacearum UW163 | 0.55 | UW163_RS09960 | | (2E,6E)-farnesyl diphosphate synthase | 0.74 | UW163_RS00775 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.55 | RALBFv3_RS03710 | | (2E,6E)-farnesyl diphosphate synthase | 0.74 | RALBFv3_RS12790 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS13520 | | polyprenyl synthetase family protein | 0.75 | RPSI07_RS20430 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Castellaniella sp019104865 MT123 | 0.52 | ABCV34_RS02230 | | polyprenyl synthetase family protein | 0.69 | ABCV34_RS15400 | | UbiD family decarboxylase | — | — |
| Ralstonia solanacearum GMI1000 | 0.52 | RS_RS11155 | | polyprenyl synthetase family protein | 0.74 | RS_RS03565 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Erwinia tracheiphila SCR3 | 0.48 | LU632_RS23555 | | polyprenyl synthetase family protein | 0.66 | LU632_RS23965 | ubiD | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Acidovorax sp. GW101-3H11 | 0.45 | Ac3H11_3565 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | 0.65 | Ac3H11_4301 | | 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) | — | — |
| Kangiella aquimarina DSM 16071 | 0.44 | B158DRAFT_1919 | | farnesyl-diphosphate synthase (EC 2.5.1.10) | 0.70 | B158DRAFT_0417 | | UbiD family decarboxylases | — | — |
| Marinobacter adhaerens HP15 | 0.44 | HP15_581 | | geranyltranstransferase | 0.69 | HP15_235 | | UbiD family decarboxylase | — | — |
| Pseudomonas sp. S08-1 | 0.44 | OH686_15785 | | (2E,6E)-farnesyl diphosphate synthase | 0.69 | OH686_11260 | | 3-polyprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Pseudomonas putida KT2440 | 0.43 | PP_0528 | | farnesyl diphosphate synthase | 0.69 | PP_5213 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_1326 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) | 0.70 | PfGW456L13_884 | | 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) | — | — |
| Shewanella loihica PV-4 | 0.42 | Shew_2770 | | polyprenyl synthetase (RefSeq) | 0.66 | Shew_0360 | | UbiD family decarboxylase (RefSeq) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_06650 | | geranyl transferase | 0.69 | AO353_08840 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Pseudomonas stutzeri RCH2 | 0.42 | Psest_0642 | | Geranylgeranyl pyrophosphate synthase | 0.69 | Psest_3728 | | UbiD family decarboxylases | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_2662 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | 0.70 | Pf1N1B4_2217 | | 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) | — | — |
| Pantoea sp. MT58 | 0.41 | IAI47_14735 | | (2E,6E)-farnesyl diphosphate synthase | 0.66 | IAI47_18245 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_4933 | | Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | 0.70 | Pf6N2E2_4463 | | 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) | — | — |
| Pseudomonas sp. RS175 | 0.41 | PFR28_03936 | | Farnesyl diphosphate synthase | 0.70 | PFR28_04336 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.41 | Psyr_0605 | | farnesyl-diphosphate synthase | 0.69 | Psyr_0302 | | 3-octaprenyl-4hydroxybenzoate decarboxylase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.41 | Psyr_0605 | | farnesyl-diphosphate synthase | 0.69 | Psyr_0302 | | 3-octaprenyl-4hydroxybenzoate decarboxylase | — | — |
| Shewanella oneidensis MR-1 | 0.41 | SO1526 | ispA | geranyltranstransferase (NCBI ptt file) | 0.66 | SO0506 | | conserved hypothetical protein TIGR00148 (NCBI ptt file) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_14995 | | geranyl transferase | 0.70 | AO356_12940 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Shewanella amazonensis SB2B | 0.40 | Sama_2435 | | geranyltranstransferase (RefSeq) | 0.67 | Sama_0426 | | carboxylyase-related protein (RefSeq) | — | — |
| Rahnella sp. WP5 | 0.40 | EX31_RS22160 | | (2E,6E)-farnesyl diphosphate synthase | 0.67 | EX31_RS14580 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Klebsiella michiganensis M5al | 0.40 | BWI76_RS06385 | | (2E,6E)-farnesyl diphosphate synthase | 0.66 | BWI76_RS01345 | | 3-octaprenyl-4-hydroxybenzoate decarboxylase | — | — |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_01012 | | Farnesyl diphosphate synthase | 0.66 | MPMX20_04439 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS15930 | | (2E,6E)-farnesyl diphosphate synthase | 0.66 | HER17_RS20565 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Enterobacter asburiae PDN3 | 0.39 | EX28DRAFT_2550 | | Geranylgeranyl pyrophosphate synthase | 0.67 | EX28DRAFT_4506 | | UbiD family decarboxylase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.39 | GFF4325 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) | 0.66 | GFF268 | | 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) | — | — |
| Pseudomonas simiae WCS417 | 0.38 | PS417_25200 | | geranyl transferase | 0.69 | PS417_27365 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Escherichia coli ECRC100 | 0.38 | OKFHMN_08415 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.65 | OKFHMN_14260 | ubiD | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Escherichia coli ECRC99 | 0.38 | KEDOAH_19550 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.65 | KEDOAH_13890 | ubiD | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Escherichia coli ECRC102 | 0.38 | NIAGMN_06470 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.65 | NIAGMN_12015 | ubiD | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Escherichia coli ECRC98 | 0.38 | JDDGAC_12070 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.65 | JDDGAC_17885 | ubiD | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Escherichia coli ECRC101 | 0.38 | MCAODC_27640 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.65 | MCAODC_04765 | ubiD | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Escherichia coli Nissle 1917 | 0.38 | ECOLIN_RS02540 | | (2E,6E)-farnesyl diphosphate synthase | 0.65 | ECOLIN_RS22155 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Pseudomonas fluorescens SBW25 | 0.38 | PFLU_RS26840 | | hypothetical protein | 0.69 | PFLU_RS29025 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Escherichia coli ECRC62 | 0.38 | BNILDI_22780 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.65 | BNILDI_05140 | ubiD | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.38 | OHPLBJKB_03255 | | Farnesyl diphosphate synthase | 0.66 | OHPLBJKB_04210 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.38 | PFLU_RS26840 | | hypothetical protein | 0.69 | PFLU_RS29025 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Escherichia fergusonii Becca | 0.38 | EFB2_03636 | | Farnesyl diphosphate synthase | 0.65 | EFB2_04774 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Escherichia coli ECOR38 | 0.38 | HEPCGN_07045 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.66 | HEPCGN_12890 | ubiD | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Escherichia coli BL21 | 0.38 | ECD_00369 | | geranyltranstransferase | 0.66 | ECD_03734 | | 3-octaprenyl-4-hydroxybenzoate decarboxylase | — | — |
| Escherichia coli ECOR27 | 0.38 | NOLOHH_01365 | ispA | (2E,6E)-farnesyl diphosphate synthase | 0.65 | NOLOHH_06390 | ubiD | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Escherichia coli BW25113 | 0.38 | b0421 | ispA | geranyltranstransferase (NCBI) | 0.65 | b3843 | ubiD | 3-octaprenyl-4-hydroxybenzoate decarboxylase (NCBI) | — | — |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_2900 | | farnesyl-diphosphate synthase (RefSeq) | 0.66 | Shewana3_0506 | | 3-octaprenyl-4hydroxybenzoate decarboxylase (RefSeq) | — | — |
| Dickeya dianthicola 67-19 | 0.37 | HGI48_RS05595 | | (2E,6E)-farnesyl diphosphate synthase | 0.67 | HGI48_RS00940 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Dickeya dianthicola ME23 | 0.37 | DZA65_RS05920 | | (2E,6E)-farnesyl diphosphate synthase | 0.67 | DZA65_RS01000 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Rhodospirillum rubrum S1H | 0.36 | Rru_A2618 | | Polyprenyl synthetase (NCBI) | 0.53 | Rru_A0574 | | Carboxylyase-related protein (NCBI) | — | — |
| Serratia liquefaciens MT49 | 0.36 | IAI46_04930 | | (2E,6E)-farnesyl diphosphate synthase | 0.67 | IAI46_01115 | | 4-hydroxy-3-polyprenylbenzoate decarboxylase | — | — |
| Azospirillum brasilense Sp245 | 0.36 | AZOBR_RS20795 | | farnesyl-diphosphate synthase | 0.55 | AZOBR_RS11915 | | 3-polyprenyl-4-hydroxybenzoate decarboxylase | — | — |
| Azospirillum sp. SherDot2 | 0.36 | MPMX19_05065 | | Farnesyl diphosphate synthase | 0.56 | MPMX19_01910 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Synechococcus elongatus PCC 7942 | 0.34 | Synpcc7942_0776 | crtE | farnesyl-diphosphate synthase | 0.39 | Synpcc7942_2588 | ubiD | 3-octaprenyl-4hydroxybenzoate decarboxylase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_002715 | | polyprenyl synthetase family protein | 0.46 | TX73_004800 | | UbiD family decarboxylase | — | — |
| Alteromonas macleodii MIT1002 | 0.33 | MIT1002_02692 | | Farnesyl diphosphate synthase | 0.68 | MIT1002_03615 | | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | — | — |
| Caulobacter crescentus NA1000 | 0.32 | CCNA_02150 | | dimethylallyltransferase/geranyltranstransferase | 0.56 | CCNA_00315 | | 3-polyprenyl-4-hydroxybenzoate decarboxylase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_02150 | | dimethylallyltransferase/geranyltranstransferase | 0.56 | CCNA_00315 | | 3-polyprenyl-4-hydroxybenzoate decarboxylase | — | — |
| Agrobacterium fabrum C58 | 0.30 | Atu2721 | | geranyltranstransferase | 0.48 | Atu4394 | | hypothetical protein | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.30 | A4249_RS09695 | | polyprenyl synthetase family protein | 0.58 | A4249_RS09175 | | UbiD family decarboxylase | — | — |
| Sinorhizobium meliloti 1021 | 0.30 | SMc03884 | | geranyltranstransferase | 0.45 | SMa1288 | | Carboxylase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.29 | AMB_RS14610 | | polyprenyl synthetase family protein | 0.55 | AMB_RS01190 | | UbiD family decarboxylase | — | — |
Not shown: 22 genomes with orthologs for BPHYT_RS33580 only; 0 genomes with orthologs for BPHYT_RS15415 only