Conservation of cofitness between BBR_RS15810 and BBR_RS10830 in Bifidobacterium breve UCC2003

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bifidobacterium breve UCC2003 1.0 BBR_RS15810 tryptophan synthase subunit alpha 1.0 BBR_RS10830 ketol-acid reductoisomerase 0.26 19
Mycobacterium tuberculosis H37Rv 0.40 Rv1613 Probable tryptophan synthase, alpha subunit TrpA 0.53 Rv3001c Probable KETOL-acid reductoisomerase IlvC (acetohydroxy-acid isomeroreductase) (alpha-keto-beta-hydroxylacil reductoisomerase)
Rhizobium sp. OAE497 0.27 ABIE40_RS19340 tryptophan synthase subunit alpha 0.44 ABIE40_RS11360 ketol-acid reductoisomerase
Methanococcus maripaludis S2 0.27 MMP_RS05185 tryptophan synthase subunit alpha 0.42 MMP_RS03435 ketol-acid reductoisomerase
Pseudomonas stutzeri RCH2 0.27 Psest_0062 tryptophan synthase, alpha subunit 0.48 Psest_1038 ketol-acid reductoisomerase
Methanococcus maripaludis JJ 0.26 MMJJ_RS09195 tryptophan synthase subunit alpha 0.42 MMJJ_RS01620 ketol-acid reductoisomerase
Synechococcus elongatus PCC 7942 0.26 Synpcc7942_0411 trpA tryptophan synthase subunit alpha 0.48 Synpcc7942_1552 ilvC ketol-acid reductoisomerase
Marinobacter adhaerens HP15 0.26 HP15_1826 tryptophan synthase, alpha subunit 0.44 HP15_533 ketol-acid reductoisomerase
Pseudomonas sp. S08-1 0.26 OH686_12430 tryptophan synthase, alpha subunit 0.48 OH686_08115 ketol-acid reductoisomerase 0.82 13
Agrobacterium fabrum C58 0.26 Atu0019 tryptophan synthase alpha subunit 0.43 Atu2019 ketol-acid reductoisomerase
Phaeobacter inhibens DSM 17395 0.26 PGA1_c04930 tryptophan synthase alpha chain 0.44 PGA1_c06580 ketol-acid reductoisomerase IlvC
Magnetospirillum magneticum AMB-1 0.26 AMB_RS20300 tryptophan synthase subunit alpha 0.46 AMB_RS17750 ketol-acid reductoisomerase
Rhodopseudomonas palustris CGA009 0.26 TX73_000365 tryptophan synthase subunit alpha 0.45 TX73_010485 ketol-acid reductoisomerase
Pseudomonas fluorescens SBW25 0.25 PFLU_RS00175 tryptophan synthase subunit alpha 0.47 PFLU_RS25640 ketol-acid reductoisomerase low > 109
Pseudomonas simiae WCS417 0.25 PS417_00180 tryptophan synthase subunit alpha 0.47 PS417_23800 ketol-acid reductoisomerase 0.67 16
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_10705 tryptophan synthase subunit alpha 0.47 AO353_14505 ketol-acid reductoisomerase 0.84 6
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS00175 tryptophan synthase subunit alpha 0.47 PFLU_RS25640 ketol-acid reductoisomerase 0.74 20
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_10910 tryptophan synthase subunit alpha 0.47 AO356_16180 ketol-acid reductoisomerase 0.95 5
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_565 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.47 PfGW456L13_1540 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.87 7
Dinoroseobacter shibae DFL-12 0.25 Dshi_0952 tryptophan synthase, alpha subunit (RefSeq) 0.44 Dshi_2396 ketol-acid reductoisomerase (RefSeq)
Pseudomonas sp. RS175 0.25 PFR28_04716 Tryptophan synthase alpha chain 0.45 PFR28_03697 Ketol-acid reductoisomerase (NADP(+))
Sinorhizobium meliloti 1021 0.25 SMc02765 tryptophan synthase subunit alpha 0.45 SMc04346 ketol-acid reductoisomerase 0.72 35
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_1830 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.47 Pf1N1B4_2880 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.89 8
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_4047 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.46 Pf6N2E2_5177 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.89 11
Acinetobacter radioresistens SK82 0.25 MPMX26_02611 Tryptophan synthase alpha chain 0.48 MPMX26_00474 Ketol-acid reductoisomerase (NADP(+))
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_0033 tryptophan synthase, alpha chain 0.47 Psyr_0848 ketol-acid reductoisomerase 0.64 20
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_0033 tryptophan synthase, alpha chain 0.47 Psyr_0848 ketol-acid reductoisomerase 0.55 78
Pseudomonas putida KT2440 0.24 PP_0082 tryptophan synthase alpha chain 0.46 PP_4678 Ketol-acid reductoisomerase 0.87 5
Acidovorax sp. GW101-3H11 0.24 Ac3H11_1535 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.45 Ac3H11_527 Ketol-acid reductoisomerase (EC 1.1.1.86)
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS00120 tryptophan synthase subunit alpha 0.20 HMPREF1078_RS16675 ketol-acid reductoisomerase low > 61
Variovorax sp. SCN45 0.23 GFF3882 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.47 GFF1161 Ketol-acid reductoisomerase (NADP(+)) (EC 1.1.1.86)
Dechlorosoma suillum PS 0.23 Dsui_3191 tryptophan synthase, alpha subunit 0.47 Dsui_3527 ketol-acid reductoisomerase
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS21075 tryptophan synthase subunit alpha 0.20 ABI39_RS12735 ketol-acid reductoisomerase 0.78 15
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS07200 tryptophan synthase subunit alpha 0.20 HMPREF1058_RS16835 ketol-acid reductoisomerase 0.92 18
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS15350 tryptophan synthase subunit alpha 0.19 HMPREF1181_RS08315 ketol-acid reductoisomerase 0.90 7
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS14350 tryptophan synthase alpha chain 0.47 RR42_RS05445 ketol-acid reductoisomerase
Azospirillum brasilense Sp245 0.22 AZOBR_RS00520 tryptophan synthase subunit alpha 0.48 AZOBR_RS06570 ketol-acid reductoisomerase
Variovorax sp. OAS795 0.22 ABID97_RS08425 tryptophan synthase subunit alpha 0.47 ABID97_RS14895 ketol-acid reductoisomerase
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS14490 tryptophan synthase subunit alpha 0.47 ABZR87_RS14945 ketol-acid reductoisomerase
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_03657 tryptophan synthase alpha chain 0.46 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase
Caulobacter crescentus NA1000 0.22 CCNA_03657 tryptophan synthase alpha chain 0.46 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS11320 tryptophan synthase subunit alpha 0.39 A4249_RS05080 ketol-acid reductoisomerase
Ralstonia solanacearum PSI07 0.21 RPSI07_RS14740 tryptophan synthase subunit alpha 0.47 RPSI07_RS14265 ketol-acid reductoisomerase
Azospirillum sp. SherDot2 0.21 MPMX19_02737 Tryptophan synthase alpha chain 0.47 MPMX19_01774 Ketol-acid reductoisomerase (NADP(+))
Ralstonia solanacearum GMI1000 0.21 RS_RS09955 tryptophan synthase subunit alpha 0.47 RS_RS10410 ketol-acid reductoisomerase
Ralstonia solanacearum UW163 0.21 UW163_RS11150 tryptophan synthase subunit alpha 0.47 UW163_RS10685 ketol-acid reductoisomerase
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS02575 tryptophan synthase subunit alpha 0.47 RALBFv3_RS03040 ketol-acid reductoisomerase
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS16470 tryptophan synthase subunit alpha 0.46 HSERO_RS08660 ketol-acid reductoisomerase 0.45 51
Paraburkholderia graminis OAS925 0.21 ABIE53_004811 tryptophan synthase alpha chain 0.45 ABIE53_001576 ketol-acid reductoisomerase
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_1740 trpA tryptophan synthase subunit alpha (RefSeq) 0.50 DvMF_0155 ketol-acid reductoisomerase (RefSeq) low > 51
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.1967.1 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.44 Xcc-8004.1060.1 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.89 15
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_06065 tryptophan synthase, alpha chain 0.44 H281DRAFT_04553 ketol-acid reductoisomerase 0.57 7
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS33865 tryptophan synthase alpha chain 0.45 BPHYT_RS06555 ketol-acid reductoisomerase 0.92 5
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS17655 tryptophan synthase subunit alpha 0.45 QEN71_RS24215 ketol-acid reductoisomerase 0.88 19
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_0239 tryptophan synthase, alpha chain (EC 4.2.1.20) 0.48 Ga0059261_0066 ketol-acid reductoisomerase (EC 1.1.1.86)

Not shown: 37 genomes with orthologs for BBR_RS15810 only; 8 genomes with orthologs for BBR_RS10830 only