Conservation of cofitness between Atu2640 and Atu4548 in Agrobacterium fabrum C58

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2640 hypothetical protein 1.0 Atu4548 3-oxoadipate CoA-transferase subunit B 0.21 19
Rhizobium sp. OAE497 0.75 ABIE40_RS18005 cell division protein ZapE 0.91 ABIE40_RS19555 CoA transferase subunit B low > 107
Bosea sp. OAE506 0.47 ABIE41_RS08950 cell division protein ZapE 0.41 ABIE41_RS01845 3-oxoacid CoA-transferase subunit B low > 77
Rhodopseudomonas palustris CGA009 0.46 TX73_001000 cell division protein ZapE 0.39 TX73_021540 3-oxoacid CoA-transferase subunit B low > 86
Azospirillum sp. SherDot2 0.42 MPMX19_00614 Cell division protein ZapE 0.39 MPMX19_05364 Acetate CoA-transferase subunit beta low > 112
Caulobacter crescentus NA1000 0.39 CCNA_03646 ATPase 0.40 CCNA_02489 acetate/3-ketoacid CoA transferase, subunit B low > 66
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_03646 ATPase 0.40 CCNA_02489 acetate/3-ketoacid CoA transferase, subunit B low > 67
Dinoroseobacter shibae DFL-12 0.37 Dshi_0112 AFG1-family ATPase (RefSeq) 0.40 Dshi_1134 3-oxoacid CoA-transferase, B subunit (RefSeq) low > 64
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_1335 Predicted ATPase 0.41 Ga0059261_0263 3-oxoacid CoA-transferase, B subunit low > 68
Phaeobacter inhibens DSM 17395 0.37 PGA1_c31670 AFG1-like ATPase 0.40 PGA1_c06200 probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS12685 cell division protein ZapE 0.40 A4249_RS02955 3-oxoacid CoA-transferase subunit B
Rhodospirillum rubrum S1H 0.36 Rru_A1208 AFG1-like ATPase (NCBI) 0.37 Rru_A1382 Butyrate-acetoacetate CoA-transferase (NCBI) low > 58
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.337.1 ATPase, AFG1 family 0.45 Xcc-8004.4477.1 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) low > 74
Pseudomonas stutzeri RCH2 0.32 Psest_0722 Predicted ATPase 0.44 Psest_1077 acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) low > 67
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5331 ATPase, AFG1 family 0.45 Pf6N2E2_2112 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B (from data) low > 103
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_05116 cell division protein ZapE 0.51 H281DRAFT_01596 3-oxoadipate CoA-transferase beta subunit low > 103
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_17035 ATPase 0.45 AO356_21645 succinyl-CoA--3-ketoacid-CoA transferase low > 104
Pseudomonas putida KT2440 0.31 PP_1312 putative enzyme with nucleoside triphosphate hydrolase domain 0.51 PP_3952 3-oxoadipate CoA-transferase subunit A
Lysobacter sp. OAE881 0.31 ABIE51_RS01095 cell division protein ZapE 0.45 ABIE51_RS04385 CoA transferase subunit B 0.73 32
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_15185 ATPase 0.43 AO353_27940 succinyl-CoA--3-ketoacid-CoA transferase low > 101
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS14870 ATPase 0.54 HSERO_RS19995 3-oxoadipate CoA-transferase subunit B
Pseudomonas sp. RS175 0.31 PFR28_03612 Cell division protein ZapE 0.45 PFR28_01324 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B low > 88
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_2095 Predicted ATPase 0.44 B158DRAFT_2504 3-oxoacid CoA-transferase, B subunit low > 40
Acinetobacter radioresistens SK82 0.31 MPMX26_01246 Cell division protein ZapE 0.53 MPMX26_01700 3-oxoadipate CoA-transferase subunit B low > 36
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_2969 ATPase, AFG1 family 0.45 Pf1N1B4_5834 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) low > 87
Paraburkholderia graminis OAS925 0.31 ABIE53_002450 cell division protein ZapE 0.52 ABIE53_004276 3-oxoadipate CoA-transferase beta subunit low > 113
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS08125 ATPase 0.51 BPHYT_RS21420 3-oxoadipate CoA-transferase subunit B low > 109
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS23045 cell division protein ZapE 0.52 QEN71_RS18095 3-oxoacid CoA-transferase subunit B low > 153
Pseudomonas simiae WCS417 0.31 PS417_04125 ATPase 0.43 PS417_10520 succinyl-CoA:3-ketoacid-CoA transferase
Variovorax sp. OAS795 0.30 ABID97_RS14160 cell division protein ZapE 0.50 ABID97_RS24195 3-oxoacid CoA-transferase subunit B low > 91
Alteromonas macleodii MIT1002 0.30 MIT1002_00844 AFG1-like ATPase 0.45 MIT1002_02000 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B low > 70
Ralstonia solanacearum GMI1000 0.30 RS_RS06375 cell division protein ZapE 0.52 RS_RS11310 CoA transferase subunit B low > 80
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS04165 cell division protein ZapE 0.43 PFLU_RS10580 CoA transferase subunit B low > 109
Pseudomonas fluorescens SBW25 0.30 PFLU_RS04165 cell division protein ZapE 0.43 PFLU_RS10580 CoA transferase subunit B low > 109
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_4122 AFG1-like ATPase 0.43 Psyr_3238 3-oxoacid CoA-transferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_4122 AFG1-like ATPase 0.43 Psyr_3238 3-oxoacid CoA-transferase low > 86
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS11125 cell division protein ZapE 0.53 ABZR87_RS15795 CoA transferase subunit B low > 80
Ralstonia solanacearum UW163 0.30 UW163_RS13055 cell division protein ZapE 0.51 UW163_RS09805 CoA transferase subunit B
Ralstonia solanacearum PSI07 0.30 RPSI07_RS17760 cell division protein ZapE 0.52 RPSI07_RS13365 CoA transferase subunit B low > 81
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS15595 cell division protein ZapE 0.51 RALBFv3_RS03865 CoA transferase subunit B
Variovorax sp. SCN45 0.30 GFF982 Cell division protein ZapE 0.49 GFF2231 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF4874 ATPase component BioM of energizing module of biotin ECF transporter 0.49 GFF5006 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) low > 90
Shewanella loihica PV-4 0.30 Shew_3295 AFG1 family ATPase (RefSeq) 0.44 Shew_2576 3-oxoacid CoA-transferase, B subunit (RefSeq) low > 60
Acidovorax sp. GW101-3H11 0.30 Ac3H11_2464 ATPase component BioM of energizing module of biotin ECF transporter 0.48 Ac3H11_3921 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) low > 79
Enterobacter sp. TBS_079 0.30 MPMX20_04136 Cell division protein ZapE 0.44 MPMX20_01911 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B low > 85
Enterobacter asburiae PDN3 0.29 EX28DRAFT_3281 Predicted ATPase 0.44 EX28DRAFT_1709 3-oxoacid CoA-transferase, B subunit low > 76
Rhodanobacter denitrificans MT42 0.29 LRK55_RS09480 cell division protein ZapE 0.36 LRK55_RS03850 3-oxoacid CoA-transferase subunit B low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS09820 cell division protein ZapE 0.36 LRK54_RS04080 3-oxoacid CoA-transferase subunit B low > 59
Shewanella amazonensis SB2B 0.29 Sama_3072 hypothetical protein (RefSeq) 0.44 Sama_0519 3-oxoacid CoA-transferase (RefSeq) low > 62
Serratia liquefaciens MT49 0.29 IAI46_22380 cell division protein ZapE 0.52 IAI46_16160 CoA transferase subunit B low > 86
Klebsiella michiganensis M5al 0.29 BWI76_RS25355 cell division protein ZapE 0.51 BWI76_RS16140 3-oxoadipate CoA-transferase low > 92
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS12925 ATPase 0.54 RR42_RS35920 3-oxoadipate CoA-transferase low > 128
Shewanella sp. ANA-3 0.28 Shewana3_0691 AFG1 family ATPase (RefSeq) 0.43 Shewana3_1666 butyryl-CoA:acetate CoA transferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.28 SO3941 conserved hypothetical protein (NCBI ptt file) 0.43 SO1891 3-oxoadipate CoA-succinyl transferase, beta subunit (NCBI ptt file) low > 76
Escherichia coli Nissle 1917 0.28 ECOLIN_RS18535 cell division protein ZapE 0.34 ECOLIN_RS12975 acetate CoA-transferase subunit beta low > 52
Castellaniella sp019104865 MT123 0.28 ABCV34_RS01735 cell division protein ZapE 0.52 ABCV34_RS01355 3-oxoacid CoA-transferase subunit B low > 48
Escherichia coli ECOR38 0.28 HEPCGN_16685 zapE cell division protein ZapE 0.34 HEPCGN_22420 atoA acetate CoA-transferase subunit beta low > 85
Escherichia coli ECOR27 0.28 NOLOHH_09615 zapE cell division protein ZapE 0.45 NOLOHH_18995 succinyl-CoA--3-ketoacid-CoA transferase
Escherichia coli BW25113 0.28 b3232 yhcM conserved protein with nucleoside triphosphate hydrolase domain (NCBI) 0.34 b2222 atoA acetyl-CoA:acetoacetyl-CoA transferase, beta subunit (NCBI) low > 76
Escherichia fergusonii Becca 0.28 EFB2_00598 Cell division protein ZapE 0.34 EFB2_01633 Acetate CoA-transferase subunit beta low > 86
Escherichia coli BL21 0.28 ECD_03092 divisome ATPase 0.34 ECD_02149 acetyl-CoA:acetoacetyl-CoA transferase, beta subunit low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_00472 Cell division protein ZapE 0.34 OHPLBJKB_01488 Acetate CoA-transferase subunit beta low > 73
Escherichia coli ECRC62 0.27 BNILDI_01920 zapE cell division protein ZapE 0.45 BNILDI_17480 atoA succinyl-CoA--3-ketoacid-CoA transferase

Not shown: 23 genomes with orthologs for Atu2640 only; 6 genomes with orthologs for Atu4548 only