Conservation of cofitness between Atu0817 and Atu1688 in Agrobacterium fabrum C58

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0817 sulfate adenylate transferase, subunit 2 1.0 Atu1688 indole-3-glycerol-phosphate synthase 0.52 18
Sinorhizobium meliloti 1021 0.86 SMc00091 sulfate adenylyltransferase 0.78 SMc00236 Indole-3-glycerol phosphate synthase 0.72 74
Rhizobium sp. OAE497 0.85 ABIE40_RS04470 sulfate adenylyltransferase subunit CysD 0.83 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC — —
Marinobacter adhaerens HP15 0.67 HP15_2462 sulfate adenylyltransferase, small subunit 0.50 HP15_3291 indole-3-glycerol phosphate synthase 0.73 44
Pseudomonas sp. S08-1 0.67 OH686_08450 Sulfate adenylyltransferase subunit 2 0.47 OH686_15140 Indole-3-glycerol phosphate synthase — —
Acinetobacter radioresistens SK82 0.66 MPMX26_02326 Sulfate adenylyltransferase subunit 2 0.45 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.78 35
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_4128 sulfate adenylyltransferase subunit 2 0.74 Psyr_0756 indole-3-glycerol phosphate synthase low > 86
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_05080 sulfate adenylyltransferase 0.47 AO353_07210 indole-3-glycerol-phosphate synthase 0.65 23
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_4128 sulfate adenylyltransferase subunit 2 0.74 Psyr_0756 indole-3-glycerol phosphate synthase low > 86
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_4993 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.47 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.64 44
Pseudomonas putida KT2440 0.66 PP_1303 Sulfate adenylyltransferase subunit 2 0.45 PP_0422 Indole-3-glycerol phosphate synthase 0.51 18
Pseudomonas simiae WCS417 0.65 PS417_03715 sulfate adenylyltransferase subunit 2 0.48 PS417_25710 indole-3-glycerol-phosphate synthase — —
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_16665 sulfate adenylyltransferase 0.46 AO356_14440 indole-3-glycerol-phosphate synthase 0.61 45
Pseudomonas fluorescens SBW25 0.65 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_5257 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.46 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.43 50
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS03765 sulfate adenylyltransferase subunit CysD 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Pseudomonas sp. RS175 0.65 PFR28_00193 Sulfate adenylyltransferase subunit 2 0.46 PFR28_04043 Indole-3-glycerol phosphate synthase — —
Azospirillum sp. SherDot2 0.64 MPMX19_06719 Sulfate adenylyltransferase subunit 2 0.55 MPMX19_01014 Indole-3-glycerol phosphate synthase low > 112
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1058 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.47 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Pseudomonas stutzeri RCH2 0.63 Psest_3294 sulfate adenylyltransferase, small subunit 0.47 Psest_3647 Indole-3-glycerol phosphate synthase — —
Caulobacter crescentus NA1000 Δfur 0.62 CCNA_01550 sulfate adenylyltransferase subunit 2 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase low > 67
Caulobacter crescentus NA1000 0.62 CCNA_01550 sulfate adenylyltransferase subunit 2 0.54 CCNA_01976 Indole-3-glycerol phosphate synthase 0.80 57
Brevundimonas sp. GW460-12-10-14-LB2 0.62 A4249_RS15305 sulfate adenylyltransferase subunit CysD 0.54 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC — —
Rhodospirillum rubrum S1H 0.62 Rru_A2289 Sulfate adenylyltransferase, small subunit (NCBI) 0.49 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) — —
Bacteroides ovatus ATCC 8483 0.61 BACOVA_01768 putative sulfate adenylyltransferase subunit 2 0.31 BACOVA_03783 indole-3-glycerol phosphate synthase low > 94
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.1259.1 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.50 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 74
Bacteroides thetaiotaomicron VPI-5482 0.61 BT0414 sulfate adenylyltransferase subunit 2 (NCBI ptt file) 0.32 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) low > 81
Lysobacter sp. OAE881 0.61 ABIE51_RS15820 sulfate adenylyltransferase subunit CysD 0.50 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC low > 62
Parabacteroides merdae CL09T00C40 0.61 HMPREF1078_RS01705 sulfate adenylyltransferase subunit CysD 0.31 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC low > 61
Bacteroides stercoris CC31F 0.61 HMPREF1181_RS04305 sulfate adenylyltransferase subunit CysD 0.27 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC low > 56
Phocaeicola vulgatus CL09T03C04 0.60 HMPREF1058_RS02945 sulfate adenylyltransferase subunit CysD 0.26 HMPREF1058_RS07190 indole-3-glycerol phosphate synthase TrpC low > 67
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_01295 cysD sulfate adenylyltransferase subunit CysD 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC low > 52
Rhodanobacter denitrificans MT42 0.60 LRK55_RS05290 sulfate adenylyltransferase subunit CysD 0.46 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC — —
Rhodanobacter denitrificans FW104-10B01 0.60 LRK54_RS05520 sulfate adenylyltransferase subunit CysD 0.47 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.32 50
Phocaeicola dorei CL03T12C01 0.60 ABI39_RS02260 sulfate adenylyltransferase subunit CysD 0.26 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC low > 72
Bosea sp. OAE506 0.59 ABIE41_RS15370 sulfate adenylyltransferase subunit CysD 0.58 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC — —
Azospirillum brasilense Sp245 0.59 AZOBR_RS33775 sulfate adenylyltransferase subunit 2 0.53 AZOBR_RS07450 indole-3-glycerol-phosphate synthase low > 97
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS18865 sulfate adenylyltransferase subunit CysD 0.51 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC low > 74
Sphingomonas koreensis DSMZ 15582 0.55 Ga0059261_4076 sulfate adenylyltransferase, small subunit 0.51 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 68
Mycobacterium tuberculosis H37Rv 0.43 Rv1285 Probable sulfate adenylyltransferase subunit 2 CysD 0.29 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS14115 sulfate adenylyltransferase subunit CysD 0.46 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.41 Echvi_0983 sulfate adenylyltransferase, small subunit 0.31 Echvi_2508 Indole-3-glycerol phosphate synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS04115 sulfate adenylyltransferase 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase low > 88
Dechlorosoma suillum PS 0.40 Dsui_1983 sulfate adenylyltransferase, small subunit 0.46 Dsui_0168 Indole-3-glycerol phosphate synthase — —
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS15565 sulfate adenylyltransferase subunit 2 0.46 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.82 27
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS04940 sulfate adenylyltransferase subunit CysD 0.30 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF4290 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.47 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.76 22
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS00195 sulfate adenylyltransferase subunit CysD 0.47 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.65 34
Ralstonia solanacearum UW163 0.37 UW163_RS09085 sulfate adenylyltransferase subunit CysD 0.46 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS04585 sulfate adenylyltransferase subunit CysD 0.46 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum GMI1000 0.36 RS_RS12155 sulfate adenylyltransferase subunit CysD 0.47 RS_RS14450 Indole-3-glycerol phosphate synthase 1 — —
Acidovorax sp. GW101-3H11 0.36 Ac3H11_574 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.47 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.80 26
Ralstonia solanacearum PSI07 0.36 RPSI07_RS12790 sulfate adenylyltransferase subunit CysD 0.47 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC — —
Variovorax sp. OAS795 0.36 ABID97_RS15365 sulfate adenylyltransferase subunit CysD 0.47 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC low > 91
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS16255 sulfate adenylyltransferase 0.49 RR42_RS18310 indole-3-glycerol-phosphate synthase low > 128
Variovorax sp. SCN45 0.36 GFF1203 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 0.45 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS25240 sulfate adenylyltransferase subunit CysD 0.44 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.76 56
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS04740 sulfate adenylyltransferase subunit 2 0.41 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.64 50
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_00117 sulfate adenylyltransferase subunit 2 0.42 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.53 37
Magnetospirillum magneticum AMB-1 0.34 AMB_RS11195 sulfate adenylyltransferase subunit 2 0.50 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC — —
Rhodopseudomonas palustris CGA009 0.31 TX73_003885 sulfate adenylyltransferase subunit 2 0.67 TX73_014985 indole-3-glycerol phosphate synthase TrpC — —

Not shown: 33 genomes with orthologs for Atu0817 only; 7 genomes with orthologs for Atu1688 only