Conservation of cofitness between Atu0399 and Atu1308 in Agrobacterium fabrum C58

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0399 dihydroorotase 1.0 Atu1308 aspartate carbamoyl transferase catalytic subunit 0.91 4
Rhizobium sp. OAE497 0.91 ABIE40_RS02105 dihydroorotase 0.89 ABIE40_RS07385 aspartate carbamoyltransferase catalytic subunit — —
Sinorhizobium meliloti 1021 0.84 SMc02166 dihydroorotase 0.91 SMc01360 aspartate carbamoyltransferase catalytic subunit 0.86 37
Dinoroseobacter shibae DFL-12 0.71 Dshi_2371 dihydroorotase, homodimeric type (RefSeq) 0.64 Dshi_3091 aspartate carbamoyltransferase (RefSeq) 0.86 5
Phaeobacter inhibens DSM 17395 0.68 PGA1_c10910 dihydroorotase PyrC 0.65 PGA1_c03060 aspartate carbamoyltransferase PyrB 0.95 4
Ralstonia solanacearum GMI1000 0.58 RS_RS02420 dihydroorotase 0.53 RS_RS03410 aspartate carbamoyltransferase — —
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS07550 dihydroorotase 0.53 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS21625 dihydroorotase 0.53 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit — —
Kangiella aquimarina DSM 16071 0.57 B158DRAFT_1241 dihydroorotase (EC 3.5.2.3) 0.20 B158DRAFT_0021 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Ralstonia solanacearum UW163 0.57 UW163_RS01995 dihydroorotase 0.53 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS11590 dihydroorotase 0.53 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit — —
Dickeya dianthicola ME23 0.57 DZA65_RS13710 dihydroorotase 0.22 DZA65_RS01970 aspartate carbamoyltransferase 0.93 3
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS02610 dihydroorotase 0.53 RR42_RS15860 aspartate carbamoyltransferase catalytic subunit — —
Dickeya dianthicola 67-19 0.56 HGI48_RS13235 dihydroorotase 0.21 HGI48_RS01900 aspartate carbamoyltransferase 0.82 9
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS16675 dihydroorotase 0.52 BPHYT_RS04235 aspartate carbamoyltransferase low > 109
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS19235 dihydroorotase 0.50 HSERO_RS02330 aspartate carbamoyltransferase — —
Dickeya dadantii 3937 0.55 DDA3937_RS13170 dihydroorotase 0.22 DDA3937_RS01925 aspartate carbamoyltransferase 0.90 3
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_04115 dihydroorotase 0.51 AO353_08135 aspartate carbamoyltransferase catalytic subunit — —
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS26855 dihydroorotase 0.52 QEN71_RS25780 aspartate carbamoyltransferase catalytic subunit low > 153
Paraburkholderia graminis OAS925 0.55 ABIE53_003505 dihydroorotase 0.52 ABIE53_001131 aspartate carbamoyltransferase catalytic subunit — —
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_04265 dihydroorotase 0.52 H281DRAFT_04817 aspartate carbamoyltransferase — —
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_1747 Dihydroorotase (EC 3.5.2.3) 0.51 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_744 Dihydroorotase (EC 3.5.2.3) 0.51 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas putida KT2440 0.55 PP_1086 dihydroorotase 0.50 PP_4998 Aspartate carbamoyltransferase — —
Dechlorosoma suillum PS 0.54 Dsui_0250 dihydroorotase, homodimeric type 0.51 Dsui_0596 aspartate carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_5588 Dihydroorotase (EC 3.5.2.3) 0.51 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_3894 dihydroorotase 0.51 Psyr_0482 aspartate carbamoyltransferase — —
Pseudomonas sp. RS175 0.54 PFR28_03355 Dihydroorotase 0.51 PFR28_04237 Aspartate carbamoyltransferase — —
Azospirillum sp. SherDot2 0.54 MPMX19_01633 Dihydroorotase 0.67 MPMX19_01054 Aspartate carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_3894 dihydroorotase 0.51 Psyr_0482 aspartate carbamoyltransferase — —
Pectobacterium carotovorum WPP14 0.54 HER17_RS08600 dihydroorotase 0.21 HER17_RS19510 aspartate carbamoyltransferase 0.97 12
Pseudomonas simiae WCS417 0.54 PS417_05630 dihydroorotase 0.51 PS417_26700 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS05715 dihydroorotase 0.51 PFLU_RS28345 aspartate carbamoyltransferase — —
Pseudomonas fluorescens SBW25 0.54 PFLU_RS05715 dihydroorotase 0.51 PFLU_RS28345 aspartate carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_18315 dihydroorotase 0.51 AO356_13450 aspartate carbamoyltransferase catalytic subunit — —
Variovorax sp. SCN45 0.53 GFF125 Dihydroorotase (EC 3.5.2.3) 0.51 GFF2160 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 127
Escherichia coli ECRC62 0.53 BNILDI_19420 pyrC dihydroorotase 0.23 BNILDI_07385 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECOR27 0.53 NOLOHH_21260 pyrC dihydroorotase 0.23 NOLOHH_04125 pyrB aspartate carbamoyltransferase low > 57
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_18760 dihydroorotase 0.21 CSW01_12725 aspartate carbamoyltransferase 0.90 2
Azospirillum brasilense Sp245 0.53 AZOBR_RS04460 dihydroorotase 0.66 AZOBR_RS20575 aspartate carbamoyltransferase 0.66 27
Escherichia coli BL21 0.53 ECD_01058 dihydro-orotase 0.23 ECD_04113 aspartate carbamoyltransferase, catalytic subunit 0.51 12
Escherichia coli BW25113 0.53 b1062 pyrC dihydroorotase (NCBI) 0.23 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) 0.92 5
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_02603 Dihydroorotase 0.23 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit 0.59 11
Escherichia fergusonii Becca 0.53 EFB2_02912 Dihydroorotase 0.23 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit low > 86
Escherichia coli ECRC99 0.53 KEDOAH_24025 pyrC dihydroorotase 0.23 KEDOAH_16290 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC102 0.53 NIAGMN_24100 pyrC dihydroorotase 0.23 NIAGMN_09715 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC98 0.53 JDDGAC_07390 pyrC dihydroorotase 0.23 JDDGAC_15505 pyrB aspartate carbamoyltransferase — —
Rhodanobacter denitrificans MT42 0.53 LRK55_RS10600 dihydroorotase 0.42 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit — —
Escherichia coli ECRC101 0.53 MCAODC_23090 pyrC dihydroorotase 0.23 MCAODC_02370 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC101 0.52 OKFHMN_03730 pyrC dihydroorotase 0.23 OKFHMN_11865 pyrB aspartate carbamoyltransferase — —
Pseudomonas sp. S08-1 0.52 OH686_03940 dihydroorotase, homodimeric type 0.52 OH686_10940 aspartate carbamoyltransferase — —
Shewanella sp. ANA-3 0.52 Shewana3_3263 dihydroorotase (RefSeq) 0.20 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.95 2
Escherichia coli ECOR38 0.52 HEPCGN_23760 pyrC dihydroorotase 0.23 HEPCGN_10060 pyrB aspartate carbamoyltransferase low > 85
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12970 pyrC dihydroorotase 0.43 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit — —
Enterobacter sp. TBS_079 0.52 MPMX20_01741 Dihydroorotase 0.22 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.93 4
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS10900 dihydroorotase 0.42 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit — —
Escherichia coli Nissle 1917 0.52 ECOLIN_RS06160 dihydroorotase 0.23 ECOLIN_RS24625 aspartate carbamoyltransferase low > 52
Pseudomonas stutzeri RCH2 0.52 Psest_3123 dihydroorotase, homodimeric type 0.52 Psest_0291 aspartate carbamoyltransferase — —
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1869 dihydroorotase (EC 3.5.2.3) 0.22 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF523 Dihydroorotase (EC 3.5.2.3) 0.50 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.97 4
Erwinia tracheiphila SCR3 0.51 LU632_RS10340 pyrC dihydroorotase 0.22 LU632_RS20950 pyrB aspartate carbamoyltransferase 0.98 2
Shewanella oneidensis MR-1 0.51 SO3695 pyrC dihydroorotase, homodimeric type (NCBI ptt file) 0.20 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) 0.95 4
Klebsiella michiganensis M5al 0.51 BWI76_RS10990 dihydroorotase 0.22 BWI76_RS02995 aspartate carbamoyltransferase 0.85 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF3342 Dihydroorotase (EC 3.5.2.3) 0.23 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.62 10
Serratia liquefaciens MT49 0.51 IAI46_09740 dihydroorotase 0.22 IAI46_02275 aspartate carbamoyltransferase 0.89 4
Marinobacter adhaerens HP15 0.51 HP15_1216 dihydroorotase, homodimeric type 0.52 HP15_3507 aspartate carbamoyltransferase 0.62 4
Rahnella sp. WP5 0.51 EX31_RS24385 dihydroorotase 0.21 EX31_RS12785 aspartate carbamoyltransferase 0.91 45
Acidovorax sp. GW101-3H11 0.51 Ac3H11_1963 Dihydroorotase (EC 3.5.2.3) 0.51 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Variovorax sp. OAS795 0.51 ABID97_RS06040 dihydroorotase 0.50 ABID97_RS24660 aspartate carbamoyltransferase catalytic subunit — —
Shewanella amazonensis SB2B 0.50 Sama_2870 dihydroorotase (RefSeq) 0.19 Sama_0840 aspartate carbamoyltransferase (RefSeq) 0.90 3
Pantoea sp. MT58 0.50 IAI47_12215 dihydroorotase 0.22 IAI47_16860 aspartate carbamoyltransferase 0.98 5
Shewanella loihica PV-4 0.49 Shew_0728 dihydroorotase (RefSeq) 0.20 Shew_1013 aspartate carbamoyltransferase (RefSeq) 0.93 3
Acinetobacter radioresistens SK82 0.49 MPMX26_02262 Dihydroorotase 0.46 MPMX26_01099 Aspartate carbamoyltransferase — —
Alteromonas macleodii MIT1002 0.47 MIT1002_03750 Dihydroorotase 0.21 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain — —

Not shown: 1 genomes with orthologs for Atu0399 only; 29 genomes with orthologs for Atu1308 only