Conservation of cofitness between AO353_00310 and AO353_20620 in Pseudomonas fluorescens FW300-N2E3

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_00310 transaldolase 1.0 AO353_20620 isopropylmalate isomerase 0.67 10
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) 0.96 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.60 17
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) 0.97 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.56 17
Pseudomonas simiae WCS417 0.91 PS417_07730 transaldolase 0.94 PS417_18600 isopropylmalate isomerase — —
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS07805 transaldolase 0.94 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas fluorescens SBW25 0.91 PFLU_RS07805 transaldolase 0.94 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas sp. RS175 0.91 PFR28_01142 Transaldolase 0.96 PFR28_02824 3-isopropylmalate dehydratase large subunit low > 88
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_2258 Transaldolase (EC 2.2.1.2) 0.97 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.42 60
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_02175 transaldolase 0.97 AO356_21400 isopropylmalate isomerase 0.73 18
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_1914 transaldolase 0.92 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.74 16
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_1914 transaldolase 0.92 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.72 7
Pseudomonas putida KT2440 0.78 PP_2168 Transaldolase 0.90 PP_1985 3-isopropylmalate dehydratase large subunit 0.70 15
Pseudomonas stutzeri RCH2 0.78 Psest_2708 transaldolase 0.87 Psest_2591 3-isopropylmalate dehydratase, large subunit low > 67
Pseudomonas sp. S08-1 0.77 OH686_22740 transaldolase 0.89 OH686_04480 3-isopropylmalate dehydratase large subunit low > 80
Alteromonas macleodii MIT1002 0.63 MIT1002_03080 Transaldolase B 0.59 MIT1002_00947 3-isopropylmalate dehydratase large subunit — —
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS12545 transaldolase 0.49 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.52 20
Lysobacter sp. OAE881 0.63 ABIE51_RS02125 transaldolase 0.48 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit low > 62
Shewanella amazonensis SB2B 0.63 Sama_0913 transaldolase B (RefSeq) 0.59 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) — —
Shewanella oneidensis MR-1 0.62 SO3546 tal transaldolase (NCBI ptt file) 0.59 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) — —
Shewanella sp. ANA-3 0.61 Shewana3_3147 transaldolase B (RefSeq) 0.59 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) — —
Rhizobium sp. OAE497 0.61 ABIE40_RS16940 transaldolase 0.64 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit — —
Agrobacterium fabrum C58 0.60 Atu4464 transaldolase B 0.64 Atu2709 3-isopropylmalate dehydratase, large subunit — —
Shewanella loihica PV-4 0.60 Shew_1089 transaldolase B (RefSeq) 0.59 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_17325 transaldolase 0.59 CSW01_12605 3-isopropylmalate dehydratase large subunit low > 62
Klebsiella michiganensis M5al 0.60 BWI76_RS04270 transaldolase 0.60 BWI76_RS04670 3-isopropylmalate dehydratase large subunit low > 92
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS05500 transaldolase 0.72 HSERO_RS16515 isopropylmalate isomerase low > 78
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF1083 Transaldolase (EC 2.2.1.2) 0.60 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 78
Pantoea sp. MT58 0.59 IAI47_16195 transaldolase 0.61 IAI47_16010 3-isopropylmalate dehydratase large subunit low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03652 Transaldolase 0.61 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia coli ECOR27 0.59 NOLOHH_03410 transaldolase B 0.61 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 75
Escherichia coli BL21 0.59 ECD_00008 transaldolase B 0.61 ECD_00074 3-isopropylmalate dehydratase large subunit low > 61
Escherichia coli ECRC100 0.59 OKFHMN_11080 transaldolase B 0.61 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 80
Enterobacter sp. TBS_079 0.59 MPMX20_00716 Transaldolase B 0.60 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 low > 85
Escherichia coli ECRC102 0.59 NIAGMN_08930 transaldolase B 0.61 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1 — —
Escherichia coli ECRC62 0.59 BNILDI_08195 transaldolase B 0.61 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 75
Escherichia fergusonii Becca 0.59 EFB2_04035 Transaldolase B 0.61 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Escherichia coli ECRC98 0.59 JDDGAC_14675 transaldolase B 0.61 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 86
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS11000 transaldolase 0.73 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit low > 80
Escherichia coli BW25113 0.59 b0008 talB transaldolase B (NCBI) 0.61 b0072 leuC isopropylmalate isomerase large subunit (NCBI) low > 76
Escherichia coli ECRC99 0.59 KEDOAH_17075 transaldolase B 0.61 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1 — —
Rahnella sp. WP5 0.59 EX31_RS03920 transaldolase 0.63 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.54 86
Escherichia coli ECOR38 0.59 HEPCGN_09085 transaldolase B 0.61 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 87
Escherichia coli ECRC101 0.59 MCAODC_01595 transaldolase B 0.61 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 87
Escherichia coli Nissle 1917 0.59 ECOLIN_RS00045 transaldolase 0.61 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit low > 55
Serratia liquefaciens MT49 0.59 IAI46_03055 transaldolase 0.60 IAI46_03345 3-isopropylmalate dehydratase large subunit low > 86
Enterobacter asburiae PDN3 0.58 EX28DRAFT_3620 transaldolase 0.61 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit low > 76
Marinobacter adhaerens HP15 0.58 HP15_2241 transaldolase 0.79 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain low > 73
Dickeya dianthicola ME23 0.58 DZA65_RS19465 transaldolase 0.62 DZA65_RS19210 3-isopropylmalate dehydratase large subunit low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF1363 Transaldolase (EC 2.2.1.2) 0.68 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 90
Pectobacterium carotovorum WPP14 0.58 HER17_RS02815 transaldolase 0.63 HER17_RS03075 3-isopropylmalate dehydratase large subunit low > 75
Dickeya dianthicola 67-19 0.58 HGI48_RS18325 transaldolase 0.62 HGI48_RS18065 3-isopropylmalate dehydratase large subunit low > 71
Acidovorax sp. GW101-3H11 0.58 Ac3H11_2059 Transaldolase (EC 2.2.1.2) 0.69 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.63 32
Dickeya dadantii 3937 0.57 DDA3937_RS18395 transaldolase 0.62 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit low > 74
Erwinia tracheiphila SCR3 0.57 LU632_RS02630 tal transaldolase 0.57 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit low > 74
Ralstonia solanacearum GMI1000 0.57 RS_RS06170 transaldolase 0.72 RS_RS10000 3-isopropylmalate dehydratase large subunit low > 80
Ralstonia solanacearum PSI07 0.57 RPSI07_RS18015 transaldolase 0.73 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit low > 81
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS15360 transaldolase 0.72 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit low > 76
Ralstonia solanacearum UW163 0.57 UW163_RS12825 transaldolase 0.72 UW163_RS11105 3-isopropylmalate dehydratase large subunit — —
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS24595 transaldolase 0.72 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.45 56
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS13050 transaldolase 0.73 RR42_RS14400 isopropylmalate isomerase low > 128
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS06045 transaldolase 0.72 BPHYT_RS33915 isopropylmalate isomerase 0.69 29
Paraburkholderia graminis OAS925 0.55 ABIE53_001416 transaldolase 0.72 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit low > 113
Bosea sp. OAE506 0.54 ABIE41_RS23900 transaldolase 0.66 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit — —
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_00286 transaldolase 0.73 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit low > 103
Synechococcus elongatus PCC 7942 0.54 Synpcc7942_2297 tal transaldolase/EF-hand domain-containing protein 0.47 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit — —
Variovorax sp. SCN45 0.54 GFF5266 Transaldolase (EC 2.2.1.2) 0.70 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 127
Variovorax sp. OAS795 0.53 ABID97_RS07095 transaldolase 0.70 ABID97_RS08465 3-isopropylmalate dehydratase large subunit — —
Castellaniella sp019104865 MT123 0.53 ABCV34_RS15500 transaldolase 0.72 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit low > 48
Rhodospirillum rubrum S1H 0.49 Rru_A1357 Transaldolase AB (NCBI) 0.68 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI) low > 58
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4226.1 Transaldolase (EC 2.2.1.2) 0.87 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 74
Acinetobacter radioresistens SK82 0.45 MPMX26_01753 Transaldolase 0.76 MPMX26_00345 3-isopropylmalate dehydratase large subunit low > 36
Pedobacter sp. GW460-11-11-14-LB5 0.10 CA265_RS08685 fructose-6-phosphate aldolase 0.52 CA265_RS15830 3-isopropylmalate dehydratase large subunit low > 88

Not shown: 0 genomes with orthologs for AO353_00310 only; 31 genomes with orthologs for AO353_20620 only