Conservation of cofitness between AO353_07550 and AO353_14855 in Pseudomonas fluorescens FW300-N2E3

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_07550 chloramphenical resistance permease RarD 1.0 AO353_14855 uracil phosphoribosyltransferase 0.27 16
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2480 Protein rarD 0.97 Pf1N1B4_2934 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 87
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1142 Protein rarD 0.98 PfGW456L13_1597 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 87
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_4754 Protein rarD 0.95 Pf6N2E2_5235 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 103
Pseudomonas sp. RS175 0.93 PFR28_04108 Protein RarD 0.94 PFR28_03641 Uracil phosphoribosyltransferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_14110 Putative D-serine transporter (from data) 0.95 AO356_16565 uracil phosphoribosyltransferase low > 104
Pseudomonas fluorescens SBW25 0.91 PFLU_RS27675 EamA family transporter RarD 0.96 PFLU_RS04485 uracil phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS27675 EamA family transporter RarD 0.96 PFLU_RS04485 uracil phosphoribosyltransferase low > 109
Pseudomonas simiae WCS417 0.91 PS417_26030 chloramphenical resistance permease RarD 0.95 PS417_04435 uracil phosphoribosyltransferase low > 88
Pseudomonas putida KT2440 0.90 PP_0358 conserved membrane protein of unknown function 0.94 PP_0746 Uracil phosphoribosyltransferase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_4698 RarD protein 0.95 Psyr_0969 uracil phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_4698 RarD protein 0.95 Psyr_0969 uracil phosphoribosyltransferase low > 86
Pseudomonas sp. S08-1 0.72 OH686_10385 Uncharacterized inner membrane protein RarD 0.92 OH686_17985 uracil phosphoribosyltransferase low > 80
Pseudomonas stutzeri RCH2 0.68 Psest_0356 rarD protein 0.91 Psest_1120 uracil phosphoribosyltransferase low > 67
Escherichia coli ECOR27 0.48 NOLOHH_06505 rarD EamA family transporter RarD 0.74 NOLOHH_13465 upp uracil phosphoribosyltransferase low > 75
Escherichia coli ECRC102 0.48 NIAGMN_12130 rarD EamA family transporter RarD 0.74 NIAGMN_19585 upp uracil phosphoribosyltransferase — —
Escherichia coli ECRC98 0.48 JDDGAC_18000 rarD EamA family transporter RarD 0.74 JDDGAC_25760 upp uracil phosphoribosyltransferase low > 86
Escherichia coli ECRC100 0.48 OKFHMN_14375 rarD EamA family transporter RarD 0.74 OKFHMN_21815 upp uracil phosphoribosyltransferase low > 80
Escherichia coli ECRC62 0.48 BNILDI_05025 rarD EamA family transporter RarD 0.74 BNILDI_12275 upp uracil phosphoribosyltransferase low > 75
Escherichia coli ECRC99 0.48 KEDOAH_13775 rarD EamA family transporter RarD 0.74 KEDOAH_06405 upp uracil phosphoribosyltransferase — —
Escherichia coli ECOR38 0.48 HEPCGN_13075 rarD EamA family transporter RarD 0.74 HEPCGN_20980 upp uracil phosphoribosyltransferase low > 87
Escherichia coli BL21 0.48 ECD_03698 putative chloramphenical resistance permease 0.74 ECD_02390 uracil phosphoribosyltransferase low > 61
Escherichia fergusonii Becca 0.48 EFB2_04818 Protein RarD 0.74 EFB2_01400 Uracil phosphoribosyltransferase low > 86
Escherichia coli BW25113 0.48 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.74 b2498 upp uracil phosphoribosyltransferase (VIMSS) low > 76
Escherichia coli ECRC101 0.48 MCAODC_04880 rarD EamA family transporter RarD 0.74 MCAODC_12345 upp uracil phosphoribosyltransferase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_04232 Protein RarD 0.74 OHPLBJKB_01228 Uracil phosphoribosyltransferase low > 73
Escherichia coli Nissle 1917 0.47 ECOLIN_RS21920 EamA family transporter RarD 0.74 ECOLIN_RS14185 uracil phosphoribosyltransferase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF245 Protein rarD 0.74 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 78
Enterobacter sp. TBS_079 0.47 MPMX20_04461 Protein RarD 0.75 MPMX20_03352 Uracil phosphoribosyltransferase low > 85
Enterobacter asburiae PDN3 0.46 EX28DRAFT_4484 rarD protein 0.75 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) low > 76
Shewanella sp. ANA-3 0.46 Shewana3_3765 transporter DMT superfamily protein (RefSeq) 0.70 Shewana3_2544 upp uracil phosphoribosyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.46 SO4243 rarD rarD protein (NCBI ptt file) 0.70 SO2759 upp uracil phosphoribosyltransferase (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.46 IAI46_00755 EamA family transporter RarD 0.74 IAI46_18880 uracil phosphoribosyltransferase low > 86
Shewanella loihica PV-4 0.46 Shew_3476 transporter DMT superfamily protein (RefSeq) 0.70 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) low > 60
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS08060 EamA family transporter RarD 0.46 ABZR87_RS15395 uracil phosphoribosyltransferase low > 80
Erwinia tracheiphila SCR3 0.45 LU632_RS24110 rarD EamA family transporter RarD 0.72 LU632_RS08280 upp uracil phosphoribosyltransferase low > 74
Pectobacterium carotovorum WPP14 0.45 HER17_RS01380 EamA family transporter RarD 0.73 HER17_RS15460 uracil phosphoribosyltransferase low > 75
Dickeya dadantii 3937 0.45 DDA3937_RS19865 EamA family transporter RarD 0.74 DDA3937_RS06030 uracil phosphoribosyltransferase low > 74
Pantoea sp. MT58 0.45 IAI47_18375 EamA family transporter RarD 0.73 IAI47_05185 uracil phosphoribosyltransferase low > 76
Alteromonas macleodii MIT1002 0.45 MIT1002_00151 putative chloramphenical resistance permease RarD 0.67 MIT1002_02893 Uracil phosphoribosyltransferase low > 70
Shewanella amazonensis SB2B 0.45 Sama_0332 rarD protein (RefSeq) 0.73 Sama_2096 upp uracil phosphoribosyltransferase (RefSeq) low > 62
Klebsiella michiganensis M5al 0.44 BWI76_RS01230 chloramphenicol resistance permease RarD 0.75 BWI76_RS20945 uracil phosphoribosyltransferase low > 92
Rahnella sp. WP5 0.44 EX31_RS15195 EamA family transporter RarD 0.72 EX31_RS22700 uracil phosphoribosyltransferase low > 89
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_01040 protein RarD 0.71 CSW01_11345 uracil phosphoribosyltransferase low > 62
Dickeya dianthicola ME23 0.43 DZA65_RS21060 EamA family transporter RarD 0.74 DZA65_RS06425 uracil phosphoribosyltransferase low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS20020 EamA family transporter RarD 0.74 HGI48_RS06075 uracil phosphoribosyltransferase low > 71
Ralstonia solanacearum GMI1000 0.40 RS_RS02855 EamA family transporter RarD 0.49 RS_RS10980 uracil phosphoribosyltransferase low > 80
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS20410 transporter 0.50 RR42_RS30815 uracil phosphoribosyltransferase low > 128
Acidovorax sp. GW101-3H11 0.40 Ac3H11_4000 RarD protein, DMT superfamily transporter 0.52 Ac3H11_2428 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 79
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS26035 EamA family transporter RarD 0.48 QEN71_RS24390 uracil phosphoribosyltransferase 0.36 96
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU2425 rarD rarD protein (TIGR) 0.63 DVU1025 upp uracil phosphoribosyltransferase (TIGR) — —
Ralstonia solanacearum UW163 0.39 UW163_RS01440 EamA family transporter RarD 0.48 UW163_RS10140 uracil phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS12170 EamA family transporter RarD 0.48 RALBFv3_RS03530 uracil phosphoribosyltransferase low > 76
Agrobacterium fabrum C58 0.38 Atu1068 hypothetical protein 0.51 Atu0135 uracil phosphoribosyltransferase low > 89
Marinobacter adhaerens HP15 0.37 HP15_2670 RarD protein, DMT superfamily transporter 0.80 HP15_2306 uracil phosphoribosyltransferase low > 73
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS23555 membrane protein 0.46 HSERO_RS03500 uracil phosphoribosyltransferase low > 78
Ralstonia solanacearum PSI07 0.36 RPSI07_RS21160 EamA family transporter RarD 0.48 RPSI07_RS13695 uracil phosphoribosyltransferase low > 81
Phaeobacter inhibens DSM 17395 0.36 PGA1_c33100 protein RarD 0.50 PGA1_c11960 uracil phosphoribosyltransferase Upp low > 62
Lysobacter sp. OAE881 0.36 ABIE51_RS03205 EamA family transporter RarD 0.65 ABIE51_RS15050 uracil phosphoribosyltransferase low > 62
Rhizobium sp. OAE497 0.36 ABIE40_RS06215 EamA family transporter RarD 0.51 ABIE40_RS00825 uracil phosphoribosyltransferase low > 107
Azospirillum brasilense Sp245 0.36 AZOBR_RS04315 transporter 0.47 AZOBR_RS03150 uracil phosphoribosyltransferase low > 97
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_2967 RarD protein, DMT superfamily transporter (RefSeq) 0.64 DvMF_0911 uracil phosphoribosyltransferase (RefSeq) low > 51
Caulobacter crescentus NA1000 0.35 CCNA_00254 RarD family membrane permease 0.49 CCNA_02351 uracil phosphoribosyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00254 RarD family membrane permease 0.49 CCNA_02351 uracil phosphoribosyltransferase low > 67
Azospirillum sp. SherDot2 0.34 MPMX19_00476 Protein RarD 0.47 MPMX19_02205 Uracil phosphoribosyltransferase 0.39 41
Sinorhizobium meliloti 1021 0.33 SMc02545 hypothetical protein 0.50 SMc04121 uracil phosphoribosyltransferase low > 103
Rhodospirillum rubrum S1H 0.33 Rru_A0706 RarD protein (NCBI) 0.46 Rru_A2255 Uracil phosphoribosyl transferase (NCBI) low > 58
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.4969.1 RarD protein, chloamphenicol sensitive 0.63 Xcc-8004.2160.1 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 74
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_15360 permease 0.24 CA264_14760 uracil phosphoribosyltransferase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF1172 Chloramphenicol-sensitive protein rarD 0.52 GFF1179 Uracil phosphoribosyltransferase (EC 2.4.2.9) low > 90
Pedobacter sp. GW460-11-11-14-LB5 0.14 CA265_RS22830 permease 0.20 CA265_RS19460 uracil phosphoribosyltransferase low > 88

Not shown: 4 genomes with orthologs for AO353_07550 only; 28 genomes with orthologs for AO353_14855 only