Conservation of cofitness between ABZR87_RS03930 and ABZR87_RS21505 in Ralstonia sp. UNC404CL21Col

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS03930 glycine cleavage system protein GcvH 1.0 ABZR87_RS21505 tartrate dehydrogenase 0.44 2
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS08655 glycine cleavage system protein H 0.96 RALBFv3_RS18940 tartrate dehydrogenase — —
Ralstonia solanacearum UW163 0.82 UW163_RS04955 glycine cleavage system protein H 0.96 UW163_RS20190 tartrate dehydrogenase — —
Ralstonia solanacearum PSI07 0.80 RPSI07_RS08580 glycine cleavage system protein H 0.95 RPSI07_RS04610 tartrate dehydrogenase low > 81
Ralstonia solanacearum GMI1000 0.79 RS_RS16505 glycine cleavage system protein H 0.91 RS_RS24845 tartrate dehydrogenase low > 80
Cupriavidus basilensis FW507-4G11 0.71 RR42_RS20065 glycine cleavage system protein H 0.65 RR42_RS02600 tartrate dehydrogenase low > 128
Paraburkholderia graminis OAS925 0.59 ABIE53_000237 glycine cleavage system H protein 0.78 ABIE53_005023 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_02410 glycine cleavage system H protein 0.77 H281DRAFT_06345 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase low > 103
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS19325 glycine cleavage system H protein 0.77 BPHYT_RS30235 tartrate dehydrogenase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_0247 glycine cleavage system H protein 0.74 Psyr_2396 Tartrate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_0247 glycine cleavage system H protein 0.74 Psyr_2396 Tartrate dehydrogenase low > 86
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS29210 glycine cleavage system protein GcvH 0.77 QEN71_RS32005 tartrate dehydrogenase low > 153
Pseudomonas fluorescens SBW25 0.57 PFLU_RS28910 glycine cleavage system protein GcvH 0.72 PFLU_RS19735 tartrate dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS28910 glycine cleavage system protein GcvH 0.72 PFLU_RS19735 tartrate dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4486 Glycine cleavage system H protein 0.73 Pf6N2E2_369 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) low > 103
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_13040 glycine cleavage system protein H 0.73 AO356_26735 tartrate dehydrogenase low > 104
Shewanella amazonensis SB2B 0.56 Sama_2720 glycine cleavage system protein H (RefSeq) 0.27 Sama_2423 isocitrate dehydrogenase (RefSeq) — —
Dickeya dianthicola 67-19 0.55 HGI48_RS03395 glycine cleavage system protein GcvH 0.66 HGI48_RS04605 tartrate dehydrogenase low > 71
Serratia liquefaciens MT49 0.55 IAI46_20855 glycine cleavage system protein GcvH 0.75 IAI46_21025 tartrate dehydrogenase low > 86
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_08730 glycine cleavage system protein H 0.74 AO353_28225 tartrate dehydrogenase low > 101
Shewanella oneidensis MR-1 0.54 SO0780 gcvH glycine cleavage system H protein (NCBI ptt file) 0.27 SO1538 isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) — —
Shewanella sp. ANA-3 0.54 Shewana3_3500 glycine cleavage system protein H (RefSeq) 0.28 Shewana3_2890 isocitrate dehydrogenase (RefSeq) — —
Escherichia coli ECRC99 0.54 KEDOAH_08615 gcvH glycine cleavage system protein GcvH 0.74 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase — —
Escherichia coli ECRC100 0.54 OKFHMN_19525 gcvH glycine cleavage system protein GcvH 0.74 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 80
Escherichia coli BW25113 0.54 b2904 gcvH glycine cleavage system protein H (NCBI) 0.74 b1800 yeaU predicted dehydrogenase (NCBI) low > 76
Escherichia coli ECRC102 0.54 NIAGMN_17290 gcvH glycine cleavage system protein GcvH 0.74 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase — —
Escherichia coli BL21 0.54 ECD_02736 glycine cleavage complex lipoylprotein 0.74 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase low > 61
Dickeya dianthicola ME23 0.54 DZA65_RS03440 glycine cleavage system protein GcvH 0.67 DZA65_RS04525 tartrate dehydrogenase low > 75
Pantoea sp. MT58 0.54 IAI47_03770 glycine cleavage system protein GcvH 0.67 IAI47_17525 tartrate dehydrogenase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_00811 Glycine cleavage system H protein 0.74 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] low > 73
Escherichia coli ECRC101 0.54 MCAODC_10045 gcvH glycine cleavage system protein GcvH 0.74 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 87
Escherichia coli ECRC98 0.54 JDDGAC_23165 gcvH glycine cleavage system protein GcvH 0.74 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 86
Escherichia coli ECRC62 0.54 BNILDI_09975 gcvH glycine cleavage system protein GcvH 0.74 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 75
Escherichia coli ECOR38 0.54 HEPCGN_18815 gcvH glycine cleavage system protein GcvH 0.74 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 87
Escherichia coli ECOR27 0.54 NOLOHH_11440 gcvH glycine cleavage system protein GcvH 0.74 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase low > 75
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_2235 Glycine cleavage system H protein 0.74 Pf1N1B4_4932 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) low > 87
Klebsiella michiganensis M5al 0.54 BWI76_RS23875 glycine cleavage system protein H 0.75 BWI76_RS10680 tartrate dehydrogenase low > 92
Shewanella loihica PV-4 0.53 Shew_3063 glycine cleavage system protein H (RefSeq) 0.28 Shew_2760 isocitrate dehydrogenase (RefSeq) — —
Dickeya dadantii 3937 0.52 DDA3937_RS03250 glycine cleavage system protein GcvH 0.66 DDA3937_RS04645 tartrate dehydrogenase low > 74
Alteromonas macleodii MIT1002 0.52 MIT1002_02972 Glycine cleavage system H protein 0.28 MIT1002_00983 Isocitrate dehydrogenase [NADP] low > 70
Castellaniella sp019104865 MT123 0.50 ABCV34_RS08840 glycine cleavage system protein GcvH 0.70 ABCV34_RS14695 tartrate dehydrogenase low > 48
Marinobacter adhaerens HP15 0.50 HP15_459 glycine cleavage H-protein, subgroup 0.34 HP15_817 3-isopropylmalate dehydrogenase low > 73
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS18880 glycine cleavage system protein GcvH 0.27 ABZR86_RS00740 isocitrate dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_01310 gcvH glycine cleavage system protein GcvH 0.26 OKGIIK_03810 leuB isocitrate dehydrogenase — —
Lysobacter sp. OAE881 0.48 ABIE51_RS16360 glycine cleavage system protein GcvH 0.27 ABIE51_RS14200 isocitrate dehydrogenase — —
Bosea sp. OAE506 0.47 ABIE41_RS22925 glycine cleavage system protein GcvH 0.66 ABIE41_RS22540 tartrate dehydrogenase low > 77
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS05505 glycine cleavage system protein GcvH 0.26 LRK54_RS15050 isocitrate dehydrogenase — —
Rhodanobacter denitrificans MT42 0.47 LRK55_RS05275 glycine cleavage system protein GcvH 0.26 LRK55_RS14765 isocitrate dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS07915 glycine cleavage system protein H 0.77 HSERO_RS07390 tartrate dehydrogenase low > 78
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.1568.1 Glycine cleavage system H protein 0.28 Xcc-8004.4057.1 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) — —
Azospirillum sp. SherDot2 0.44 MPMX19_01030 Glycine cleavage system H protein 0.41 MPMX19_06850 putative tartrate dehydrogenase/decarboxylase TtuC' low > 112
Phaeobacter inhibens DSM 17395 0.44 PGA1_c05560 glycine cleavage system protein GcvH 0.52 PGA1_c17990 D-malate dehydrogenase low > 62
Mycobacterium tuberculosis H37Rv 0.43 Rv1826 Probable glycine cleavage system H protein GcvH 0.32 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) — —
Sinorhizobium meliloti 1021 0.41 SMc02048 glycine cleavage system protein H 0.42 SMa1846 3-isopropylmalate dehydrogenase low > 103
Magnetospirillum magneticum AMB-1 0.40 AMB_RS03930 glycine cleavage system protein H 0.46 AMB_RS16020 tartrate dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.40 Dshi_2681 glycine cleavage system H protein (RefSeq) 0.65 Dshi_0775 tartrate dehydrogenase (RefSeq) — —
Agrobacterium fabrum C58 0.40 Atu1463 glycine cleavage system component H 0.43 Atu3402 3-isopropylmalate dehydrogenase low > 89
Rhodopseudomonas palustris CGA009 0.39 TX73_019930 glycine cleavage system protein GcvH 0.66 TX73_008960 tartrate dehydrogenase low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF5214 Glycine cleavage system H protein 0.65 GFF3852 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) low > 90
Variovorax sp. SCN45 0.38 GFF6477 Glycine cleavage system H protein 0.67 GFF2854 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) — —
Variovorax sp. OAS795 0.38 ABID97_RS19650 glycine cleavage system protein GcvH 0.86 ABID97_RS25885 tartrate dehydrogenase — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_166 Glycine cleavage system H protein 0.89 Ac3H11_3259 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) low > 79
Bifidobacterium breve UCC2003 0.31 BBR_RS12855 glycine cleavage system protein H 0.36 BBR_RS12870 3-isopropylmalate dehydrogenase low > 34

Not shown: 38 genomes with orthologs for ABZR87_RS03930 only; 1 genomes with orthologs for ABZR87_RS21505 only