| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS14025 | | LysR family transcriptional regulator ArgP | 1.0 | ABZR87_RS11815 | | [protein-PII] uridylyltransferase | 0.31 | 15 |
| Ralstonia solanacearum UW163 | 0.85 | UW163_RS20770 | | transcriptional regulator ArgP | 0.90 | UW163_RS13695 | | [protein-PII] uridylyltransferase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.85 | RALBFv3_RS18360 | | transcriptional regulator ArgP | 0.90 | RALBFv3_RS00365 | | [protein-PII] uridylyltransferase | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.84 | RPSI07_RS03900 | | transcriptional regulator ArgP | 0.91 | RPSI07_RS17110 | | [protein-PII] uridylyltransferase | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.79 | RR42_RS31465 | | LysR family transcriptional regulator | 0.73 | RR42_RS11885 | | (protein-PII) uridylyltransferase | low | > 128 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.76 | GFF5065 | | Chromosome initiation inhibitor | 0.57 | GFF4563 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | — | — |
| Azospirillum sp. SherDot2 | 0.58 | MPMX19_01759 | | putative HTH-type transcriptional regulator | 0.24 | MPMX19_00912 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 112 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS23875 | | LysR family transcriptional regulator ArgP | 0.59 | ABID97_RS15665 | | [protein-PII] uridylyltransferase | low | > 91 |
| Agrobacterium fabrum C58 | 0.53 | Atu0928 | | transcriptional regulator, LysR family | 0.23 | Atu0346 | | uridylyltransferase/uridylyl-removing enzyme UTase | low | > 89 |
| Variovorax sp. SCN45 | 0.53 | GFF2318 | | Transcriptional regulator ArgP, LysR family | 0.59 | GFF1322 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme | low | > 127 |
| Azospirillum brasilense Sp245 | 0.51 | AZOBR_RS01600 | | LysR family transcriptional regulator | 0.24 | AZOBR_RS02110 | | protein-PII uridylyltransferase | low | > 97 |
| Rhodospirillum rubrum S1H | 0.50 | Rru_A0658 | | Transcriptional Regulator, LysR family (NCBI) | 0.22 | Rru_A3539 | | GlnB (protein PII) uridylyltransferase, GlnD (NCBI) | low | > 58 |
| Paraburkholderia graminis OAS925 | 0.47 | ABIE53_001719 | | LysR family transcriptional regulator (chromosome initiation inhibitor) | 0.67 | ABIE53_002507 | | [protein-PII] uridylyltransferase | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.47 | H281DRAFT_04882 | | transcriptional regulator, LysR family | 0.67 | H281DRAFT_00608 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS23610 | | LysR family transcriptional regulator ArgP | 0.67 | QEN71_RS06410 | | [protein-PII] uridylyltransferase | low | > 153 |
| Phaeobacter inhibens DSM 17395 | 0.46 | PGA1_c21740 | | transcriptional regulator, ArgP family | 0.23 | PGA1_c26750 | | uridylyltransferase GlnD | — | — |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS07440 | | LysR family transcriptional regulator | 0.68 | BPHYT_RS12150 | | PII uridylyl-transferase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.45 | Dshi_0711 | | transcriptional regulator, LysR family (RefSeq) | 0.22 | Dshi_2833 | | UTP-GlnB uridylyltransferase, GlnD (RefSeq) | — | — |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_3378 | | chromosome replication initiation inhibitor protein | 0.58 | Ac3H11_537 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 79 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.1463.1 | | Transcriptional regulator lysR family | 0.26 | Xcc-8004.3543.1 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | — | — |
| Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_01770 | | Transcriptional regulator ArgP | 0.26 | OKGIIK_10125 | glnD | [protein-PII] uridylyltransferase | low | > 52 |
| Pseudomonas fluorescens FW300-N2C3 | 0.43 | AO356_04995 | | LysR family transcriptional regulator | 0.32 | AO356_06050 | | protein-PII uridylyltransferase | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.43 | PfGW456L13_1782 | | Chromosome initiation inhibitor | 0.33 | PfGW456L13_4711 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.43 | Pf6N2E2_2849 | | Chromosome initiation inhibitor | 0.33 | Pf6N2E2_3072 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 103 |
| Pseudomonas sp. RS175 | 0.43 | PFR28_00608 | | HTH-type transcriptional regulator ArgP | 0.31 | PFR28_00394 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.43 | AO353_03915 | | LysR family transcriptional regulator | 0.33 | AO353_16450 | | protein-PII uridylyltransferase | low | > 101 |
| Dyella japonica UNC79MFTsu3.2 | 0.42 | ABZR86_RS10990 | | LysR family transcriptional regulator ArgP | 0.28 | ABZR86_RS21575 | | [protein-PII] uridylyltransferase | low | > 74 |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_708 | | Chromosome initiation inhibitor | 0.32 | Pf1N1B4_3081 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_4057 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.31 | Psyr_1341 | | Protein-P-II uridylyltransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_4057 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.31 | Psyr_1341 | | Protein-P-II uridylyltransferase | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS23790 | | LysR family transcriptional regulator ArgP | 0.32 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS23790 | | LysR family transcriptional regulator ArgP | 0.32 | PFLU_RS06265 | | [protein-PII] uridylyltransferase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.42 | PS417_22165 | | LysR family transcriptional regulator | 0.33 | PS417_06200 | | protein-PII uridylyltransferase | 0.17 | 77 |
| Pseudomonas stutzeri RCH2 | 0.41 | Psest_1166 | | transcriptional regulator, ArgP family | 0.33 | Psest_2845 | | [Protein-PII] uridylyltransferase | low | > 67 |
| Pseudomonas sp. S08-1 | 0.41 | OH686_07195 | | Transcriptional regulator ArgP, LysR family | 0.33 | OH686_06495 | | protein-P-II uridylyltransferase | low | > 80 |
| Pseudomonas putida KT2440 | 0.40 | PP_0917 | | Chromosome initiation inhibitor | 0.32 | PP_1589 | | uridylyltransferase | low | > 96 |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS10625 | | HTH-type transcriptional regulator ArgP | 0.29 | HER17_RS16345 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Shewanella loihica PV-4 | 0.40 | Shew_1844 | | chromosome replication initiation inhibitor protein (RefSeq) | 0.30 | Shew_2637 | | PII uridylyl-transferase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.39 | Sama_2987 | | chromosome replication initiation inhibitor protein (RefSeq) | 0.28 | Sama_1137 | | PII uridylyl-transferase (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_1652 | | chromosome replication initiation inhibitor protein (RefSeq) | 0.28 | Shewana3_2817 | | PII uridylyl-transferase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.38 | SO2866 | iciA | chromosome initiation inhibitor (NCBI ptt file) | 0.28 | SO1626 | glnD | protein-P-II uridylyltransferase (NCBI ptt file) | low | > 76 |
| Mycobacterium tuberculosis H37Rv | 0.38 | Rv1985c | | Probable transcriptional regulatory protein (probably LysR-family) | 0.09 | Rv2918c | | Probable [protein-PII] uridylyltransferase GlnD (PII uridylyl-transferase) (uridylyl removing enzyme) (UTASE) | low | > 58 |
| Marinobacter adhaerens HP15 | 0.36 | HP15_868 | | transcriptional regulator, LysR family | 0.29 | HP15_1163 | | [protein-PII] uridylyltransferase | low | > 73 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.35 | DVU0594 | iciA | chromosome initiation inhibitor (TIGR) | 0.13 | DVU1233 | glnD | protein-P-II uridylyltransferase, putative (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.35 | DvMF_2123 | | chromosome replication initiation inhibitor protein (RefSeq) | 0.12 | DvMF_0864 | | UTP-GlnB uridylyltransferase, GlnD (RefSeq) | low | > 51 |
| Vibrio cholerae E7946 ATCC 55056 | 0.34 | CSW01_02560 | | chromosome initiation inhibitor | 0.29 | CSW01_11520 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.31 | LU632_RS05845 | | LysR family transcriptional regulator ArgP | 0.30 | LU632_RS19980 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.31 | GFF3015 | | Chromosome initiation inhibitor | 0.30 | GFF55 | | [Protein-PII] uridylyltransferase (EC 2.7.7.59) | low | > 78 |
| Dickeya dadantii 3937 | 0.30 | DDA3937_RS18490 | | LysR family transcriptional regulator ArgP | 0.29 | DDA3937_RS05105 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 74 |
| Dickeya dianthicola 67-19 | 0.30 | HGI48_RS18415 | | LysR family transcriptional regulator ArgP | 0.29 | HGI48_RS05105 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 71 |
| Dickeya dianthicola ME23 | 0.30 | DZA65_RS19550 | | LysR family transcriptional regulator ArgP | 0.29 | DZA65_RS05445 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Enterobacter sp. TBS_079 | 0.30 | MPMX20_03773 | | HTH-type transcriptional regulator ArgP | 0.30 | MPMX20_00851 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | — | — |
| Enterobacter asburiae PDN3 | 0.30 | EX28DRAFT_2967 | | transcriptional regulator, ArgP family | 0.30 | EX28DRAFT_3754 | | UTP--GlnB (protein PII) uridylyltransferase, GlnD | low | > 76 |
| Serratia liquefaciens MT49 | 0.30 | IAI46_20910 | | LysR family transcriptional regulator ArgP | 0.30 | IAI46_20270 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 86 |
| Escherichia coli Nissle 1917 | 0.30 | ECOLIN_RS16225 | | DNA-binding transcriptional regulator ArgP | 0.30 | ECOLIN_RS00915 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.30 | OHPLBJKB_00800 | | HTH-type transcriptional regulator ArgP | 0.30 | OHPLBJKB_03497 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | low | > 73 |
| Rahnella sp. WP5 | 0.30 | EX31_RS21460 | | LysR family transcriptional regulator ArgP | 0.29 | EX31_RS13045 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 89 |
| Escherichia coli ECOR38 | 0.30 | HEPCGN_18750 | argP | DNA-binding transcriptional regulator ArgP | 0.30 | HEPCGN_08185 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC102 | 0.30 | NIAGMN_17215 | argP | DNA-binding transcriptional regulator ArgP | 0.30 | NIAGMN_08085 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli BL21 | 0.30 | ECD_02747 | | transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor | 0.30 | ECD_00165 | | uridylyltransferase | 0.47 | 30 |
| Escherichia coli ECRC101 | 0.30 | MCAODC_09970 | argP | DNA-binding transcriptional regulator ArgP | 0.30 | MCAODC_00750 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECRC98 | 0.30 | JDDGAC_23090 | argP | DNA-binding transcriptional regulator ArgP | 0.30 | JDDGAC_13830 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia fergusonii Becca | 0.30 | EFB2_00987 | | HTH-type transcriptional regulator ArgP | 0.30 | EFB2_03878 | | Bifunctional uridylyltransferase/uridylyl-removing enzyme | — | — |
| Klebsiella michiganensis M5al | 0.30 | BWI76_RS23930 | | transcriptional regulator ArgP | 0.29 | BWI76_RS05200 | | bifunctional uridylyltransferase/uridylyl-removing protein | 0.29 | 78 |
| Escherichia coli ECRC100 | 0.30 | OKFHMN_19450 | argP | DNA-binding transcriptional regulator ArgP | 0.30 | OKFHMN_10235 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli BW25113 | 0.30 | b2916 | argP | chromosome replication initiation inhibitor protein (NCBI) | 0.30 | b0167 | glnD | PII uridylyl-transferase (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.30 | BNILDI_09890 | argP | DNA-binding transcriptional regulator ArgP | 0.30 | BNILDI_09090 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 75 |
| Escherichia coli ECRC99 | 0.30 | KEDOAH_08690 | argP | DNA-binding transcriptional regulator ArgP | 0.30 | KEDOAH_17920 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Escherichia coli ECOR27 | 0.30 | NOLOHH_11355 | argP | DNA-binding transcriptional regulator ArgP | 0.30 | NOLOHH_02580 | glnD | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | — | — |
| Pantoea sp. MT58 | 0.30 | IAI47_03715 | | LysR family transcriptional regulator ArgP | 0.30 | IAI47_15540 | | bifunctional uridylyltransferase/uridylyl-removing protein GlnD | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.30 | MIT1002_00129 | | OriC replication inhibitor | 0.28 | MIT1002_01001 | | PII uridylyl-transferase | low | > 70 |
Not shown: 0 genomes with orthologs for ABZR87_RS14025 only; 17 genomes with orthologs for ABZR87_RS11815 only