Conservation of cofitness between A4249_RS15570 and A4249_RS12545 in Brevundimonas sp. GW460-12-10-14-LB2

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Brevundimonas sp. GW460-12-10-14-LB2 1.0 A4249_RS15570 chemotaxis protein CheW 1.0 A4249_RS12545 diaminopimelate decarboxylase 0.58 14
Sinorhizobium meliloti 1021 0.67 SMc03008 chemotaxis protein 0.47 SMc00723 diaminopimelate DAP decarboxylase — —
Rhizobium sp. OAE497 0.66 ABIE40_RS02880 chemotaxis protein CheW 0.45 ABIE40_RS17530 diaminopimelate decarboxylase 0.38 89
Caulobacter crescentus NA1000 0.66 CCNA_00443 chemotaxis protein cheW 0.61 CCNA_02296 diaminopimelate decarboxylase — —
Caulobacter crescentus NA1000 Δfur 0.66 CCNA_00443 chemotaxis protein cheW 0.61 CCNA_02296 diaminopimelate decarboxylase — —
Agrobacterium fabrum C58 0.49 Atu2075 chemotaxis protein 0.47 Atu3601 diaminopimelate decarboxylase — —
Phaeobacter inhibens DSM 17395 0.41 PGA1_262p02110 putative chemotaxis protein CheW 0.53 PGA1_c03470 diaminopimelate decarboxylase LysA — —
Shewanella loihica PV-4 0.39 Shew_0112 CheW protein (RefSeq) 0.41 Shew_0322 diaminopimelate decarboxylase (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS35800 chemotaxis protein CheW 0.37 RR42_RS19050 diaminopimelate decarboxylase — —
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_02895 Chemotaxis protein CheW 0.41 OKGIIK_12375 lysA diaminopimelate decarboxylase low > 52
Shewanella amazonensis SB2B 0.38 Sama_3496 biotin synthase (RefSeq) 0.39 Sama_3250 diaminopimelate decarboxylase (RefSeq) low > 62
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS14950 purine-binding chemotaxis protein 0.39 HSERO_RS00950 diaminopimelate decarboxylase — —
Ralstonia solanacearum PSI07 0.37 RPSI07_RS06250 chemotaxis protein CheW 0.39 RPSI07_RS10250 diaminopimelate decarboxylase — —
Bosea sp. OAE506 0.37 ABIE41_RS12290 chemotaxis protein CheW 0.51 ABIE41_RS08740 diaminopimelate decarboxylase — —
Ralstonia solanacearum UW163 0.37 UW163_RS21755 chemotaxis protein CheW 0.40 UW163_RS06625 diaminopimelate decarboxylase — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS17395 chemotaxis protein CheW 0.40 RALBFv3_RS06990 diaminopimelate decarboxylase — —
Variovorax sp. SCN45 0.37 GFF5724 Positive regulator of CheA protein activity (CheW) 0.37 GFF5315 Diaminopimelate decarboxylase (EC 4.1.1.20) — —
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS17965 chemotaxis protein CheW 0.39 ABZR87_RS02640 diaminopimelate decarboxylase low > 80
Ralstonia solanacearum GMI1000 0.37 RS_RS23915 chemotaxis protein CheW 0.39 RS_RS14930 diaminopimelate decarboxylase — —
Acidovorax sp. GW101-3H11 0.36 Ac3H11_1422 Positive regulator of CheA protein activity (CheW) 0.23 Ac3H11_3862 Diaminopimelate decarboxylase (EC 4.1.1.20) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2450 Positive regulator of CheA protein activity (CheW) 0.36 GFF1341 Diaminopimelate decarboxylase (EC 4.1.1.20) low > 90
Dechlorosoma suillum PS 0.35 Dsui_1709 chemotaxis signal transduction protein 0.41 Dsui_1182 diaminopimelate decarboxylase — —
Serratia liquefaciens MT49 0.35 IAI46_16035 chemotaxis protein CheW 0.22 IAI46_20520 diaminopimelate decarboxylase low > 86
Shewanella sp. ANA-3 0.35 Shewana3_2217 CheW protein (RefSeq) 0.42 Shewana3_0390 diaminopimelate decarboxylase (RefSeq) low > 73
Pectobacterium carotovorum WPP14 0.35 HER17_RS08105 chemotaxis protein CheW 0.20 HER17_RS03710 diaminopimelate decarboxylase low > 75
Escherichia coli Nissle 1917 0.34 ECOLIN_RS10775 chemotaxis protein CheW 0.23 ECOLIN_RS15930 diaminopimelate decarboxylase low > 55
Escherichia coli ECRC101 0.34 MCAODC_19280 cheW chemotaxis protein CheW 0.23 MCAODC_10470 lysA diaminopimelate decarboxylase low > 87
Escherichia coli ECOR38 0.34 HEPCGN_04545 cheW chemotaxis protein CheW 0.23 HEPCGN_19565 lysA diaminopimelate decarboxylase low > 87
Escherichia coli ECOR27 0.34 NOLOHH_16565 cheW chemotaxis protein CheW 0.23 NOLOHH_11830 lysA diaminopimelate decarboxylase low > 75
Escherichia coli ECRC102 0.34 NIAGMN_01935 cheW chemotaxis protein CheW 0.23 NIAGMN_17715 lysA diaminopimelate decarboxylase — —
Escherichia fergusonii Becca 0.34 EFB2_02056 Chemotaxis protein CheW 0.23 EFB2_01045 Diaminopimelate decarboxylase low > 86
Escherichia coli ECRC99 0.34 KEDOAH_01980 cheW chemotaxis protein CheW 0.23 KEDOAH_08185 lysA diaminopimelate decarboxylase — —
Escherichia coli BL21 0.34 ECD_01858 purine-binding chemotaxis protein 0.23 ECD_02686 diaminopimelate decarboxylase, PLP-binding — —
Escherichia coli BW25113 0.34 b1887 cheW purine-binding chemotaxis protein (NCBI) 0.23 b2838 lysA diaminopimelate decarboxylase, PLP-binding (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01841 Chemotaxis protein CheW 0.23 OHPLBJKB_00891 Diaminopimelate decarboxylase low > 73
Enterobacter sp. TBS_079 0.34 MPMX20_02797 Chemotaxis protein CheW 0.22 MPMX20_03705 Diaminopimelate decarboxylase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF1668 Positive regulator of CheA protein activity (CheW) 0.23 GFF1323 Diaminopimelate decarboxylase (EC 4.1.1.20) low > 78
Pantoea sp. MT58 0.34 IAI47_08305 chemotaxis protein CheW 0.20 IAI47_03860 diaminopimelate decarboxylase low > 76
Rahnella sp. WP5 0.34 EX31_RS11400 chemotaxis protein CheW 0.22 EX31_RS13275 diaminopimelate decarboxylase low > 89
Escherichia coli ECRC100 0.34 OKFHMN_26125 cheW chemotaxis protein CheW 0.23 OKFHMN_19945 lysA diaminopimelate decarboxylase low > 80
Escherichia coli ECRC62 0.34 BNILDI_15355 cheW chemotaxis protein CheW 0.23 BNILDI_10310 lysA diaminopimelate decarboxylase low > 75
Escherichia coli ECRC98 0.34 JDDGAC_00700 cheW chemotaxis protein CheW 0.23 JDDGAC_23610 lysA diaminopimelate decarboxylase low > 86
Dickeya dianthicola ME23 0.34 DZA65_RS14070 chemotaxis protein CheW 0.21 DZA65_RS18550 diaminopimelate decarboxylase low > 75
Dickeya dianthicola 67-19 0.34 HGI48_RS13585 chemotaxis protein CheW 0.22 HGI48_RS17485 diaminopimelate decarboxylase low > 71
Dickeya dadantii 3937 0.34 DDA3937_RS13540 chemotaxis protein CheW 0.21 DDA3937_RS17425 diaminopimelate decarboxylase low > 74
Erwinia tracheiphila SCR3 0.34 LU632_RS13555 cheW chemotaxis protein CheW 0.21 LU632_RS06040 lysA diaminopimelate decarboxylase low > 74
Pseudomonas putida KT2440 0.34 PP_4332 Chemotaxis protein CheW 0.41 PP_5227 diaminopimelate decarboxylase low > 96
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0663 Chemotaxis signal transduction protein 0.22 EX28DRAFT_2916 diaminopimelate decarboxylase low > 76
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_1119 Chemotaxis signal transduction protein 0.44 Ga0059261_2051 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) low > 68
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_3428 CheW-like protein 0.41 Psyr_0182 diaminopimelate decarboxylase — —
Alteromonas macleodii MIT1002 0.34 MIT1002_01110 Chemotaxis protein CheW 0.39 MIT1002_00160 Diaminopimelate decarboxylase low > 70
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_3428 CheW-like protein 0.41 Psyr_0182 diaminopimelate decarboxylase — —
Lysobacter sp. OAE881 0.33 ABIE51_RS16920 chemotaxis protein CheW 0.39 ABIE51_RS13675 diaminopimelate decarboxylase low > 62
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_19540 chemotaxis protein CheW 0.41 CSW01_00635 diaminopimelate decarboxylase low > 62
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_0792 CheW protein (RefSeq) 0.42 DvMF_0353 diaminopimelate decarboxylase (RefSeq) low > 51
Marinobacter adhaerens HP15 0.33 HP15_2292 purine-binding chemotaxis protein CheW 0.44 HP15_247 diaminopimelate decarboxylase — —
Pseudomonas stutzeri RCH2 0.33 Psest_1749 Chemotaxis signal transduction protein 0.41 Psest_3764 diaminopimelate decarboxylase — —
Pseudomonas sp. S08-1 0.32 OH686_02685 Positive regulator of CheA protein activity (CheW) 0.41 OH686_13800 diaminopimelate decarboxylase 0.79 6
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS21615 chemotaxis protein CheW 0.41 PFLU_RS29265 diaminopimelate decarboxylase — —
Pseudomonas fluorescens SBW25 0.32 PFLU_RS21615 chemotaxis protein CheW 0.41 PFLU_RS29265 diaminopimelate decarboxylase low > 109
Pseudomonas simiae WCS417 0.32 PS417_19650 chemotaxis protein CheW 0.41 PS417_27580 diaminopimelate decarboxylase — —
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU1904 cheW-2 chemotaxis protein CheW (TIGR) 0.39 DVU1647 lysA-1 diaminopimelate decarboxylase (TIGR) low > 55
Pseudomonas sp. RS175 0.32 PFR28_00861 Chemotaxis protein CheW 0.41 PFR28_04375 Diaminopimelate decarboxylase — —
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_03685 chemotaxis protein CheW 0.41 AO356_12740 diaminopimelate decarboxylase — —
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_3635 Positive regulator of CheA protein activity (CheW) 0.43 Pf1N1B4_2174 Diaminopimelate decarboxylase (EC 4.1.1.20) — —
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_18830 chemotaxis protein CheW 0.41 AO353_09035 diaminopimelate decarboxylase — —
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_2564 Positive regulator of CheA protein activity (CheW) 0.41 Pf6N2E2_4419 Diaminopimelate decarboxylase (EC 4.1.1.20) — —
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4321 Positive regulator of CheA protein activity (CheW) 0.42 PfGW456L13_845 Diaminopimelate decarboxylase (EC 4.1.1.20) low > 87
Methanococcus maripaludis S2 0.29 MMP_RS04800 chemotaxis protein CheW 0.30 MMP_RS06180 diaminopimelate decarboxylase — —
Methanococcus maripaludis JJ 0.29 MMJJ_RS00335 chemotaxis protein CheW 0.30 MMJJ_RS08170 diaminopimelate decarboxylase low > 28
Castellaniella sp019104865 MT123 0.24 ABCV34_RS05830 chemotaxis protein CheW 0.41 ABCV34_RS12685 diaminopimelate decarboxylase — —
Rhodopseudomonas palustris CGA009 0.22 TX73_000720 chemotaxis protein CheW 0.49 TX73_024635 diaminopimelate decarboxylase — —
Magnetospirillum magneticum AMB-1 0.21 AMB_RS01645 chemotaxis protein CheW 0.53 AMB_RS22725 diaminopimelate decarboxylase — —

Not shown: 1 genomes with orthologs for A4249_RS15570 only; 27 genomes with orthologs for A4249_RS12545 only