Conservation of cofitness between BT0431 and BT1729 in Bacteroides thetaiotaomicron VPI-5482

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT0431 conserved hypothetical protein with conserved domain (NCBI ptt file) 1.0 BT1729 peptide chain release factor 3 (RF-3) (NCBI ptt file) 0.31 8
Bacteroides ovatus ATCC 8483 0.88 BACOVA_01785 hypothetical protein 0.94 BACOVA_04458 peptide chain release factor 3 low > 94
Bacteroides stercoris CC31F 0.76 HMPREF1181_RS04235 endolytic transglycosylase MltG 0.87 HMPREF1181_RS05585 peptide chain release factor 3 low > 56
Phocaeicola vulgatus CL09T03C04 0.61 HMPREF1058_RS07010 endolytic transglycosylase MltG 0.88 HMPREF1058_RS07935 peptide chain release factor 3 — —
Phocaeicola dorei CL03T12C01 0.61 ABI39_RS20900 endolytic transglycosylase MltG 0.88 ABI39_RS00385 peptide chain release factor 3 — —
Parabacteroides merdae CL09T00C40 0.47 HMPREF1078_RS14735 endolytic transglycosylase MltG 0.79 HMPREF1078_RS04145 peptide chain release factor 3 low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_0372 conserved hypothetical protein, YceG family 0.63 Echvi_0584 peptide chain release factor 3 low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS08085 aminodeoxychorismate lyase 0.58 CA265_RS18435 peptide chain release factor 3 low > 88
Lysobacter sp. OAE881 0.19 ABIE51_RS13920 endolytic transglycosylase MltG 0.48 ABIE51_RS16210 peptide chain release factor 3 — —
Castellaniella sp019104865 MT123 0.18 ABCV34_RS03975 endolytic transglycosylase MltG 0.45 ABCV34_RS12505 peptide chain release factor 3 low > 48
Azospirillum sp. SherDot2 0.18 MPMX19_00941 Endolytic murein transglycosylase 0.47 MPMX19_01192 Peptide chain release factor 3 — —
Pseudomonas sp. S08-1 0.18 OH686_22160 Murein endolytic transglycosylase MltG 0.47 OH686_08765 peptide chain release factor 3 — —
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_0361 conserved hypothetical protein, YceG family 0.44 Ga0059261_2044 peptide chain release factor 3 low > 68
Azospirillum brasilense Sp245 0.18 AZOBR_RS08405 aminodeoxychorismate lyase 0.49 AZOBR_RS14730 peptide chain release factor 3 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_1651 Protein of unknown function DUF175 0.46 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3) — —
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_1651 Protein of unknown function DUF175 0.46 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3) — —
Herbaspirillum seropedicae SmR1 0.17 HSERO_RS13025 aminodeoxychorismate lyase 0.47 HSERO_RS14640 peptide chain release factor 3 — —
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS06145 endolytic transglycosylase MltG 0.48 ABZR86_RS19000 peptide chain release factor 3 — —
Xanthomonas campestris pv. campestris strain 8004 0.16 Xcc-8004.3991.1 FIG004453: protein YceG like 0.47 Xcc-8004.1590.1 Peptide chain release factor 3 — —
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS23035 endolytic transglycosylase MltG 0.46 PFLU_RS04070 peptide chain release factor 3 low > 109
Pseudomonas fluorescens SBW25 0.16 PFLU_RS23035 endolytic transglycosylase MltG 0.46 PFLU_RS04070 peptide chain release factor 3 low > 109
Paraburkholderia graminis OAS925 0.16 ABIE53_002162 UPF0755 protein 0.48 ABIE53_004717 peptide chain release factor 3 low > 113
Ralstonia solanacearum GMI1000 0.16 RS_RS09000 endolytic transglycosylase MltG 0.47 RS_RS25080 peptide chain release factor 3 low > 80
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS06785 endolytic transglycosylase MltG 0.38 A4249_RS15275 peptide chain release factor 3 low > 48
Alteromonas macleodii MIT1002 0.16 MIT1002_01737 putative aminodeoxychorismate lyase 0.47 MIT1002_01192 Peptide chain release factor 3 low > 70
Ralstonia solanacearum PSI07 0.16 RPSI07_RS16445 endolytic transglycosylase MltG 0.47 RPSI07_RS07810 peptide chain release factor 3 low > 81
Enterobacter asburiae PDN3 0.16 EX28DRAFT_1832 conserved hypothetical protein, YceG family 0.47 EX28DRAFT_3583 peptide chain release factor 3 low > 76
Acidovorax sp. GW101-3H11 0.16 Ac3H11_2492 FIG004453: protein YceG like 0.45 Ac3H11_3041 Peptide chain release factor 3 — —
Rhodanobacter sp. FW510-T8 0.16 OKGIIK_05740 Endolytic murein transglycosylase 0.49 OKGIIK_01430 prfC peptide chain release factor 3 — —
Caulobacter crescentus NA1000 Δfur 0.15 CCNA_01751 aminodeoxychorismate lyase 0.38 CCNA_01123 peptide chain release factor RF-3 low > 67
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS21820 endolytic transglycosylase MltG 0.48 QEN71_RS17200 peptide chain release factor 3 low > 153
Caulobacter crescentus NA1000 0.15 CCNA_01751 aminodeoxychorismate lyase 0.38 CCNA_01123 peptide chain release factor RF-3 low > 66
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_20185 aminodeoxychorismate lyase 0.46 AO356_07285 peptide chain release factor 3 — —
Shewanella sp. ANA-3 0.15 Shewana3_1765 aminodeoxychorismate lyase (RefSeq) 0.46 Shewana3_1037 prfC peptide chain release factor 3 (RefSeq) low > 73
Burkholderia phytofirmans PsJN 0.15 BPHYT_RS09620 aminodeoxychorismate lyase 0.47 BPHYT_RS34275 peptide chain release factor 3 low > 109
Shewanella loihica PV-4 0.15 Shew_1578 aminodeoxychorismate lyase (RefSeq) 0.46 Shew_2820 prfC peptide chain release factor 3 (RefSeq) — —
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS12480 endolytic transglycosylase MltG 0.47 ABZR87_RS23485 peptide chain release factor 3 low > 80
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_01345 aminodeoxychorismate lyase 0.45 AO353_05420 peptide chain release factor 3 low > 101
Pseudomonas stutzeri RCH2 0.15 Psest_1692 conserved hypothetical protein, YceG family 0.47 Psest_3351 peptide chain release factor 3 low > 67
Rhodanobacter denitrificans FW104-10B01 0.15 LRK54_RS01160 endolytic transglycosylase MltG 0.49 LRK54_RS05380 peptide chain release factor 3 — —
Ralstonia solanacearum UW163 0.15 UW163_RS14340 endolytic transglycosylase MltG 0.47 UW163_RS16595 peptide chain release factor 3 — —
Rhodanobacter denitrificans MT42 0.15 LRK55_RS00935 endolytic transglycosylase MltG 0.49 LRK55_RS05155 peptide chain release factor 3 — —
Ralstonia solanacearum IBSBF1503 0.15 RALBFv3_RS01030 endolytic transglycosylase MltG 0.47 RALBFv3_RS23345 peptide chain release factor 3 low > 76
Enterobacter sp. TBS_079 0.15 MPMX20_01777 Endolytic murein transglycosylase 0.47 MPMX20_00673 Peptide chain release factor RF3 0.28 45
Pseudomonas sp. RS175 0.15 PFR28_03006 Endolytic murein transglycosylase 0.46 PFR28_00118 Peptide chain release factor RF3 — —
Klebsiella michiganensis M5al 0.15 BWI76_RS11110 cell division protein YceG 0.47 BWI76_RS04100 peptide chain release factor 3 low > 92
Rhodospirillum rubrum S1H 0.14 Rru_A0419 Aminodeoxychorismate lyase (NCBI) 0.49 Rru_A2497 Peptide chain release factor 3 (NCBI) low > 58
Variovorax sp. SCN45 0.14 GFF30 Murein endolytic transglycosylase MltG 0.46 GFF2045 Peptide chain release factor 3 low > 127
Paraburkholderia bryophila 376MFSha3.1 0.14 H281DRAFT_00927 UPF0755 protein 0.48 H281DRAFT_03538 bacterial peptide chain release factor 3 (bRF-3) low > 103
Shewanella amazonensis SB2B 0.14 Sama_2044 hypothetical protein (RefSeq) 0.46 Sama_0968 prfC peptide chain release factor 3 (RefSeq) low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.14 GFF4661 FIG004453: protein YceG like 0.45 GFF768 Peptide chain release factor 3 low > 90
Magnetospirillum magneticum AMB-1 0.14 AMB_RS10640 endolytic transglycosylase MltG 0.48 AMB_RS01375 peptide chain release factor 3 — —
Escherichia fergusonii Becca 0.14 EFB2_02878 Endolytic murein transglycosylase 0.48 EFB2_04072 Peptide chain release factor RF3 low > 86
Escherichia coli ECOR27 0.14 NOLOHH_21085 yceG cell division protein YceG 0.48 NOLOHH_03600 prfC peptide chain release factor 3 low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_02569 Endolytic murein transglycosylase 0.48 OHPLBJKB_03687 Peptide chain release factor RF3 low > 73
Escherichia coli ECOR38 0.14 HEPCGN_23925 yceG cell division protein YceG 0.48 HEPCGN_09285 prfC peptide chain release factor 3 low > 85
Escherichia coli BL21 0.14 ECD_01093 septation protein, ampicillin sensitivity 0.48 ECD_04250 peptide chain release factor RF-3 low > 60
Escherichia coli ECRC62 0.14 BNILDI_19245 yceG cell division protein YceG 0.48 BNILDI_08000 prfC peptide chain release factor 3 — —
Escherichia coli BW25113 0.14 b1097 yceG predicted aminodeoxychorismate lyase (NCBI) 0.48 b4375 prfC peptide chain release factor 3 (NCBI) low > 76
Escherichia coli ECRC101 0.13 OKFHMN_03555 yceG cell division protein YceG 0.48 OKFHMN_11280 prfC peptide chain release factor 3 — —
Escherichia coli ECRC99 0.13 KEDOAH_24200 yceG cell division protein YceG 0.48 KEDOAH_16865 prfC peptide chain release factor 3 — —
Escherichia coli ECRC101 0.13 MCAODC_22915 yceG cell division protein YceG 0.48 MCAODC_01795 prfC peptide chain release factor 3 — —
Escherichia coli ECRC98 0.13 JDDGAC_07215 yceG cell division protein YceG 0.48 JDDGAC_14875 prfC peptide chain release factor 3 — —
Dechlorosoma suillum PS 0.13 Dsui_2656 conserved hypothetical protein, YceG family 0.48 Dsui_2418 peptide chain release factor 3 low > 51
Escherichia coli ECRC102 0.13 NIAGMN_24275 yceG cell division protein YceG 0.48 NIAGMN_09130 prfC peptide chain release factor 3 — —
Kangiella aquimarina DSM 16071 0.13 B158DRAFT_1749 conserved hypothetical protein, YceG family 0.48 B158DRAFT_2239 peptide chain release factor 3 low > 40
Cupriavidus basilensis FW507-4G11 0.13 RR42_RS10910 aminodeoxychorismate lyase 0.49 RR42_RS37475 peptide chain release factor 3 low > 128

Not shown: 5 genomes with orthologs for BT0431 only; 27 genomes with orthologs for BT1729 only