Conservation of cofitness between b2733 and b3778 in Escherichia coli BW25113

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2733 mutS DNA mismatch repair protein (NCBI) 1.0 b3778 rep DNA helicase and single-stranded DNA-dependent ATPase (NCBI) 0.24 9
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01000 DNA mismatch repair protein MutS 1.00 OHPLBJKB_04276 ATP-dependent DNA helicase Rep low > 73
Escherichia coli BL21 1.00 ECD_02583 methyl-directed mismatch repair protein 1.00 ECD_03656 DNA helicase and single-stranded DNA-dependent ATPase — —
Escherichia coli ECRC99 1.00 KEDOAH_07610 mutS DNA mismatch repair protein MutS 0.99 KEDOAH_13540 rep DNA helicase Rep — —
Escherichia coli ECRC102 1.00 NIAGMN_18295 mutS DNA mismatch repair protein MutS 0.99 NIAGMN_12365 rep DNA helicase Rep — —
Escherichia coli ECOR27 1.00 NOLOHH_12370 mutS DNA mismatch repair protein MutS 1.00 NOLOHH_06745 rep DNA helicase Rep — —
Escherichia coli ECRC98 1.00 JDDGAC_24190 mutS DNA mismatch repair protein MutS 0.99 JDDGAC_18230 rep DNA helicase Rep — —
Escherichia coli ECRC101 1.00 MCAODC_11050 mutS DNA mismatch repair protein MutS 0.99 MCAODC_05115 rep DNA helicase Rep — —
Escherichia coli ECRC101 1.00 OKFHMN_20525 mutS DNA mismatch repair protein MutS 0.99 OKFHMN_14610 rep DNA helicase Rep — —
Escherichia coli ECRC62 1.00 BNILDI_10920 mutS DNA mismatch repair protein MutS 1.00 BNILDI_04780 rep DNA helicase Rep — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS15275 DNA mismatch repair protein MutS 0.99 ECOLIN_RS21690 DNA helicase Rep low > 52
Escherichia coli ECOR38 0.99 HEPCGN_19705 mutS DNA mismatch repair protein MutS 1.00 HEPCGN_13320 rep DNA helicase Rep low > 85
Escherichia fergusonii Becca 0.98 EFB2_01179 DNA mismatch repair protein MutS 0.97 EFB2_04860 ATP-dependent DNA helicase Rep — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4773 DNA mismatch repair protein MutS 0.96 GFF2894 ATP-dependent DNA helicase Rep — —
Enterobacter sp. TBS_079 0.92 MPMX20_03619 DNA mismatch repair protein MutS 0.94 MPMX20_04494 ATP-dependent DNA helicase Rep — —
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2829 DNA mismatch repair protein MutS 0.93 EX28DRAFT_4449 ATP-dependent DNA helicase Rep (EC 3.6.1.-) — —
Klebsiella michiganensis M5al 0.92 BWI76_RS22600 DNA mismatch repair protein MutS 0.93 BWI76_RS01020 DNA helicase Rep — —
Dickeya dianthicola ME23 0.85 DZA65_RS05570 DNA mismatch repair protein MutS 0.85 DZA65_RS21290 DNA helicase Rep — —
Serratia liquefaciens MT49 0.85 IAI46_03800 DNA mismatch repair protein MutS 0.87 IAI46_00565 DNA helicase Rep — —
Dickeya dadantii 3937 0.85 DDA3937_RS05230 DNA mismatch repair protein MutS 0.87 DDA3937_RS20105 DNA helicase Rep — —
Dickeya dianthicola 67-19 0.85 HGI48_RS05230 DNA mismatch repair protein MutS 0.85 HGI48_RS20245 DNA helicase Rep — —
Erwinia tracheiphila SCR3 0.84 LU632_RS06485 mutS DNA mismatch repair protein MutS 0.86 LU632_RS24280 rep DNA helicase Rep — —
Rahnella sp. WP5 0.84 EX31_RS07820 DNA mismatch repair protein MutS 0.85 EX31_RS15030 DNA helicase Rep — —
Pectobacterium carotovorum WPP14 0.84 HER17_RS16220 DNA mismatch repair protein MutS 0.87 HER17_RS01120 DNA helicase Rep — —
Pantoea sp. MT58 0.82 IAI47_04240 DNA mismatch repair protein MutS 0.85 IAI47_18545 DNA helicase Rep — —
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_02840 DNA mismatch repair protein MutS 0.71 CSW01_00865 DNA helicase Rep — —
Shewanella sp. ANA-3 0.67 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) 0.66 Shewana3_0374 ATP-dependent DNA helicase Rep (RefSeq) — —
Shewanella loihica PV-4 0.66 Shew_1214 DNA mismatch repair protein (RefSeq) 0.66 Shew_0305 ATP-dependent DNA helicase Rep (RefSeq) — —
Shewanella oneidensis MR-1 0.65 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) 0.65 SO4325 rep ATP-dependent DNA helicase Rep (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.65 Sama_1045 DNA mismatch repair protein MutS (RefSeq) 0.66 Sama_3266 ATP-dependent DNA helicase Rep (RefSeq) — —
Alteromonas macleodii MIT1002 0.63 MIT1002_00953 DNA mismatch repair protein MutS 0.65 MIT1002_00071 ATP-dependent DNA helicase rep — —
Marinobacter adhaerens HP15 0.60 HP15_1047 DNA mismatch repair protein MutS 0.50 HP15_214 DNA helicase, ATP-dependent, RepA type — —
Pseudomonas sp. RS175 0.58 PFR28_00429 DNA mismatch repair protein MutS 0.51 PFR28_04392 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_05875 DNA mismatch repair protein MutS 0.52 AO356_12655 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3035 DNA mismatch repair protein MutS 0.52 Pf6N2E2_4398 ATP-dependent DNA helicase Rep — —
Pseudomonas stutzeri RCH2 0.58 Psest_2875 DNA mismatch repair protein MutS 0.52 Psest_3778 ATP-dependent DNA helicase Rep — —
Pseudomonas simiae WCS417 0.58 PS417_05680 DNA mismatch repair protein MutS 0.52 PS417_27670 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_3117 DNA mismatch repair protein MutS 0.52 Pf1N1B4_2151 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_16625 DNA mismatch repair protein MutS 0.52 AO353_09120 ATP-dependent DNA helicase Rep — —
Pseudomonas putida KT2440 0.57 PP_1626 DNA mismatch repair protein MutS 0.52 PP_5264 helicase a single-stranded DNA dependent ATPase — —
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1376 DNA mismatch repair protein MutS 0.53 Psyr_0075 ATP-dependent DNA helicase Rep — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1376 DNA mismatch repair protein MutS 0.53 Psyr_0075 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_4672 DNA mismatch repair protein MutS 0.52 PfGW456L13_819 ATP-dependent DNA helicase Rep — —
Pseudomonas fluorescens SBW25 0.57 PFLU_RS05765 DNA mismatch repair protein MutS 0.52 PFLU_RS29345 DNA helicase Rep — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS05765 DNA mismatch repair protein MutS 0.52 PFLU_RS29345 DNA helicase Rep — —
Pseudomonas sp. S08-1 0.57 OH686_18195 DNA mismatch repair protein MutS 0.51 OH686_13715 ATP-dependent DNA helicase Rep — —
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS00630 DNA mismatch repair protein MutS 0.41 ABZR86_RS16790 UvrD-helicase domain-containing protein — —
Lysobacter sp. OAE881 0.54 ABIE51_RS07785 DNA mismatch repair protein MutS 0.36 ABIE51_RS00370 UvrD-helicase domain-containing protein — —
Rhodanobacter denitrificans MT42 0.54 LRK55_RS14650 DNA mismatch repair protein MutS 0.41 LRK55_RS10435 UvrD-helicase domain-containing protein — —
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_03705 mutS DNA mismatch repair protein MutS 0.41 OKGIIK_13085 rep ATP-dependent DNA helicase Rep — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS14935 DNA mismatch repair protein MutS 0.41 LRK54_RS10795 UvrD-helicase domain-containing protein — —
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_1529 DNA mismatch repair protein MutS 0.55 B158DRAFT_0352 ATP-dependent DNA helicase Rep (EC 3.6.1.-) 0.76 39
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.3760.1 DNA mismatch repair protein MutS 0.39 Xcc-8004.5266.1 ATP-dependent DNA helicase Rep — —
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_00537 DNA mismatch repair protein MutS 0.42 H281DRAFT_02416 ATP-dependent DNA helicase Rep — —
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS10580 DNA mismatch repair protein MutS 0.41 ABZR87_RS03915 UvrD-helicase domain-containing protein low > 80
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS06285 DNA mismatch repair protein MutS 0.42 RR42_RS20055 ATP-dependent DNA helicase Rep low > 128
Dechlorosoma suillum PS 0.49 Dsui_2244 DNA mismatch repair protein MutS 0.45 Dsui_0933 DNA/RNA helicase, superfamily I — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS14920 DNA mismatch repair protein MutS 0.41 RALBFv3_RS08635 ATP-dependent DNA helicase Rep low > 76
Ralstonia solanacearum UW163 0.49 UW163_RS12390 DNA mismatch repair protein MutS 0.41 UW163_RS04975 ATP-dependent DNA helicase Rep — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS18440 DNA mismatch repair protein MutS 0.41 RPSI07_RS08600 ATP-dependent DNA helicase Rep low > 81
Ralstonia solanacearum GMI1000 0.49 RS_RS05735 DNA mismatch repair protein MutS 0.41 RS_RS16480 ATP-dependent DNA helicase Rep low > 80
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS16360 DNA mismatch repair protein MutS 0.42 HSERO_RS21590 ATP-dependent DNA helicase Rep low > 78
Paraburkholderia graminis OAS925 0.49 ABIE53_002719 DNA mismatch repair protein MutS 0.42 ABIE53_000233 ATP-dependent DNA helicase Rep — —
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS12475 DNA mismatch repair protein MutS 0.42 BPHYT_RS19305 ATP-dependent DNA helicase Rep low > 109
Acinetobacter radioresistens SK82 0.47 MPMX26_01954 DNA mismatch repair protein MutS 0.49 MPMX26_02416 ATP-dependent DNA helicase Rep — —
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS06085 DNA mismatch repair protein MutS 0.42 QEN71_RS29185 UvrD-helicase domain-containing protein low > 153
Castellaniella sp019104865 MT123 0.44 ABCV34_RS00270 DNA mismatch repair protein MutS 0.38 ABCV34_RS11065 UvrD-helicase domain-containing protein low > 48
Variovorax sp. SCN45 0.44 GFF6634 DNA mismatch repair protein MutS 0.38 GFF5842 ATP-dependent DNA helicase Rep — —
Acidovorax sp. GW101-3H11 0.44 Ac3H11_3641 DNA mismatch repair protein MutS 0.35 Ac3H11_866 ATP-dependent DNA helicase Rep — —
Variovorax sp. OAS795 0.43 ABID97_RS20815 DNA mismatch repair protein MutS 0.36 ABID97_RS05510 UvrD-helicase domain-containing protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3599 DNA mismatch repair protein MutS 0.35 GFF1778 ATP-dependent DNA helicase Rep low > 90

Not shown: 29 genomes with orthologs for b2733 only; 0 genomes with orthologs for b3778 only