Conservation of cofitness between b2518 and b3642 in Escherichia coli BW25113

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2518 ndk nucleoside diphosphate kinase (NCBI) 1.0 b3642 pyrE orotate phosphoribosyltransferase (NCBI) 0.40 2
Escherichia coli ECRC98 1.00 JDDGAC_25380 ndk nucleoside-diphosphate kinase 0.99 JDDGAC_19225 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli ECRC101 1.00 MCAODC_12235 ndk nucleoside-diphosphate kinase 0.99 MCAODC_06110 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01191 Nucleoside diphosphate kinase 1.00 OHPLBJKB_00060 Orotate phosphoribosyltransferase low > 73
Escherichia coli BL21 1.00 ECD_02410 multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase 1.00 ECD_03499 orotate phosphoribosyltransferase — —
Escherichia coli ECRC62 1.00 BNILDI_12155 ndk nucleoside-diphosphate kinase 1.00 BNILDI_04035 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli ECRC102 1.00 NIAGMN_19475 ndk nucleoside-diphosphate kinase 0.99 NIAGMN_13360 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli ECRC101 1.00 OKFHMN_21705 ndk nucleoside-diphosphate kinase 0.99 OKFHMN_15600 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli ECOR27 1.00 NOLOHH_13355 ndk nucleoside-diphosphate kinase 0.99 NOLOHH_07480 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli ECRC99 1.00 KEDOAH_06515 ndk nucleoside-diphosphate kinase 0.99 KEDOAH_12550 pyrE Orotate phosphoribosyltransferase — —
Escherichia fergusonii Becca 0.99 EFB2_01372 Nucleoside diphosphate kinase 1.00 EFB2_00171 Orotate phosphoribosyltransferase low > 86
Escherichia coli ECOR38 0.99 HEPCGN_20825 ndk nucleoside-diphosphate kinase 1.00 HEPCGN_14420 pyrE Orotate phosphoribosyltransferase low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14305 nucleoside-diphosphate kinase 1.00 ECOLIN_RS20750 orotate phosphoribosyltransferase low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2415 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.97 GFF367 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS21100 nucleoside-diphosphate kinase 0.96 BWI76_RS27385 orotate phosphoribosyltransferase low > 92
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0125 nucleoside diphosphate kinase (EC 2.7.4.6) 0.96 EX28DRAFT_3892 orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Enterobacter sp. TBS_079 0.95 MPMX20_03396 Nucleoside diphosphate kinase 0.94 MPMX20_00093 Orotate phosphoribosyltransferase low > 85
Erwinia tracheiphila SCR3 0.91 LU632_RS17820 ndk nucleoside-diphosphate kinase 0.88 LU632_RS22015 pyrE orotate phosphoribosyltransferase low > 74
Pantoea sp. MT58 0.90 IAI47_05035 nucleoside-diphosphate kinase 0.87 IAI47_00600 orotate phosphoribosyltransferase low > 76
Dickeya dadantii 3937 0.81 DDA3937_RS15485 nucleoside-diphosphate kinase 0.90 DDA3937_RS20535 orotate phosphoribosyltransferase low > 74
Serratia liquefaciens MT49 0.81 IAI46_19295 nucleoside-diphosphate kinase 0.91 IAI46_24845 orotate phosphoribosyltransferase low > 86
Dickeya dianthicola 67-19 0.81 HGI48_RS15595 nucleoside-diphosphate kinase 0.88 HGI48_RS00680 orotate phosphoribosyltransferase — —
Dickeya dianthicola ME23 0.80 DZA65_RS16670 nucleoside-diphosphate kinase 0.88 DZA65_RS00735 orotate phosphoribosyltransferase low > 75
Pectobacterium carotovorum WPP14 0.80 HER17_RS06080 nucleoside-diphosphate kinase 0.90 HER17_RS20850 orotate phosphoribosyltransferase low > 75
Rahnella sp. WP5 0.79 EX31_RS20530 nucleoside-diphosphate kinase 0.90 EX31_RS14500 orotate phosphoribosyltransferase low > 89
Alteromonas macleodii MIT1002 0.74 MIT1002_02793 Nucleoside diphosphate kinase 0.75 MIT1002_04070 Orotate phosphoribosyltransferase — —
Shewanella sp. ANA-3 0.73 Shewana3_2272 nucleoside diphosphate kinase (RefSeq) 0.82 Shewana3_3776 pyrE orotate phosphoribosyltransferase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_1148 nucleoside diphosphate kinase (EC 2.7.4.6) 0.70 B158DRAFT_0786 orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Shewanella loihica PV-4 0.72 Shew_2310 nucleoside-diphosphate kinase (RefSeq) 0.83 Shew_3487 pyrE orotate phosphoribosyltransferase (RefSeq) — —
Shewanella amazonensis SB2B 0.71 Sama_1301 ndk nucleoside diphosphate kinase (RefSeq) 0.84 Sama_0321 pyrE orotate phosphoribosyltransferase (RefSeq) — —
Acinetobacter radioresistens SK82 0.71 MPMX26_00425 Nucleoside diphosphate kinase 0.56 MPMX26_02937 Orotate phosphoribosyltransferase — —
Shewanella oneidensis MR-1 0.71 SO2274 ndk nucleoside diphosphate kinase (NCBI ptt file) 0.82 SO4255 pyrE orotate phosphoribosyltransferase (NCBI ptt file) — —
Marinobacter adhaerens HP15 0.70 HP15_1489 nucleoside diphosphate kinase 0.64 HP15_298 orotate phosphoribosyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_03925 nucleoside-diphosphate kinase 0.85 CSW01_01120 orotate phosphoribosyltransferase — —
Pseudomonas sp. S08-1 0.66 OH686_17510 Nucleoside diphosphate kinase 0.69 OH686_13590 Orotate phosphoribosyltransferase — —
Pseudomonas stutzeri RCH2 0.65 Psest_1258 Nucleoside diphosphate kinase 0.71 Psest_3810 orotate phosphoribosyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2738.1 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.47 Xcc-8004.4884.1 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS00065 nucleoside-diphosphate kinase 0.59 LRK54_RS09190 orotate phosphoribosyltransferase — —
Rhodanobacter denitrificans MT42 0.64 LRK55_RS18060 nucleoside-diphosphate kinase 0.59 LRK55_RS08720 orotate phosphoribosyltransferase — —
Pseudomonas putida KT2440 0.64 PP_0849 Nucleoside diphosphate kinase 0.67 PP_5291 Orotate phosphoribosyltransferase — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_07145 ndk nucleoside-diphosphate kinase 0.59 OKGIIK_15685 pyrE orotate phosphoribosyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS05460 nucleoside-diphosphate kinase 0.61 ABZR86_RS15640 orotate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_3182 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.68 Pf6N2E2_4370 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS13160 nucleoside diphosphate kinase 0.55 RR42_RS01225 orotate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_06610 nucleoside diphosphate kinase 0.67 AO356_12520 orotate phosphoribosyltransferase — —
Pseudomonas sp. RS175 0.63 PFR28_00293 Nucleoside diphosphate kinase 0.71 PFR28_04417 Orotate phosphoribosyltransferase — —
Lysobacter sp. OAE881 0.63 ABIE51_RS09410 nucleoside-diphosphate kinase 0.46 ABIE51_RS00065 orotate phosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4866 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.67 PfGW456L13_788 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_858 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.67 Pf1N1B4_2120 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_15870 nucleoside diphosphate kinase 0.67 AO353_09245 orotate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_1244 nucleoside diphosphate kinase 0.72 Psyr_0216 orotate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_1244 nucleoside diphosphate kinase 0.72 Psyr_0216 orotate phosphoribosyltransferase — —
Variovorax sp. OAS795 0.61 ABID97_RS14205 nucleoside-diphosphate kinase 0.48 ABID97_RS03910 orotate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS24820 nucleoside-diphosphate kinase 0.68 PFLU_RS29475 orotate phosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.61 PS417_23165 nucleoside diphosphate kinase 0.68 PS417_27795 orotate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.61 PFLU_RS24820 nucleoside-diphosphate kinase 0.68 PFLU_RS29475 orotate phosphoribosyltransferase — —
Variovorax sp. SCN45 0.61 GFF991 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.49 GFF5065 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Dechlorosoma suillum PS 0.59 Dsui_3146 nucleoside diphosphate kinase 0.58 Dsui_0873 orotate phosphoribosyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.59 DvMF_3160 Nucleoside-diphosphate kinase (RefSeq) 0.13 DvMF_1469 orotate phosphoribosyltransferase (RefSeq) — —
Castellaniella sp019104865 MT123 0.58 ABCV34_RS02605 nucleoside-diphosphate kinase 0.58 ABCV34_RS10890 orotate phosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS14815 nucleoside diphosphate kinase 0.55 HSERO_RS23380 orotate phosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS18120 nucleoside-diphosphate kinase 0.52 RPSI07_RS23295 orotate phosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS10895 nucleoside-diphosphate kinase 0.52 ABZR87_RS05590 orotate phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS15255 nucleoside-diphosphate kinase 0.53 RALBFv3_RS10075 orotate phosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.56 UW163_RS12720 nucleoside-diphosphate kinase 0.53 UW163_RS03505 orotate phosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF4867 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.49 GFF1882 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Ralstonia solanacearum GMI1000 0.56 RS_RS06065 nucleoside-diphosphate kinase 0.52 RS_RS00685 orotate phosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_1790 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.51 Ac3H11_3341 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Methanococcus maripaludis S2 0.45 MMP_RS01525 nucleoside-diphosphate kinase 0.13 MMP_RS07670 orotate phosphoribosyltransferase — —
Methanococcus maripaludis JJ 0.43 MMJJ_RS03850 nucleoside-diphosphate kinase 0.13 MMJJ_RS06690 orotate phosphoribosyltransferase — —

Not shown: 30 genomes with orthologs for b2518 only; 1 genomes with orthologs for b3642 only