Conservation of cofitness between b2763 and b0072 in Escherichia coli BW25113

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2763 cysI sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) 1.0 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.93 13
Escherichia coli BL21 1.00 ECD_02608 sulfite reductase, beta subunit, NAD(P)-binding, heme-binding 1.00 ECD_00074 3-isopropylmalate dehydratase large subunit 0.55 6
Escherichia coli ECRC102 1.00 NIAGMN_18145 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC62 1.00 BNILDI_10740 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 1.00 MCAODC_10900 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15405 assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit low > 52
Escherichia coli ECRC99 1.00 KEDOAH_07750 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 1.00 OKFHMN_20375 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC98 1.00 JDDGAC_24040 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECOR27 1.00 NOLOHH_12190 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 57
Escherichia fergusonii Becca 1.00 EFB2_01154 Sulfite reductase [NADPH] hemoprotein beta-component 1.00 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00970 Sulfite reductase [NADPH] hemoprotein beta-component 1.00 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia coli ECOR38 0.99 HEPCGN_19090 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 1.00 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 85
Enterobacter sp. TBS_079 0.96 MPMX20_03642 Sulfite reductase [NADPH] hemoprotein beta-component 0.94 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.65 21
Enterobacter asburiae PDN3 0.95 EX28DRAFT_2852 sulfite reductase (NADPH) hemoprotein, beta-component 0.95 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.71 39
Klebsiella michiganensis M5al 0.95 BWI76_RS22760 sulfite reductase subunit beta 0.95 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.83 21
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4819 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.94 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 78
Pantoea sp. MT58 0.88 IAI47_04155 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.87 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.92 10
Serratia liquefaciens MT49 0.87 IAI46_03690 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.86 IAI46_03345 3-isopropylmalate dehydratase large subunit low > 86
Erwinia tracheiphila SCR3 0.86 LU632_RS06405 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.79 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit low > 74
Pectobacterium carotovorum WPP14 0.85 HER17_RS04240 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.86 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.91 34
Dickeya dadantii 3937 0.85 DDA3937_RS16940 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.85 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit 0.78 61
Dickeya dianthicola 67-19 0.84 HGI48_RS17010 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.85 HGI48_RS18065 3-isopropylmalate dehydratase large subunit 0.76 71
Dickeya dianthicola ME23 0.84 DZA65_RS18085 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.85 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.70 32
Rahnella sp. WP5 0.82 EX31_RS07900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.87 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.94 22
Alteromonas macleodii MIT1002 0.74 MIT1002_03379 Sulfite reductase [NADPH] hemoprotein beta-component 0.69 MIT1002_00947 3-isopropylmalate dehydratase large subunit
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_02015 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.80 CSW01_12605 3-isopropylmalate dehydratase large subunit low > 62
Shewanella amazonensis SB2B 0.70 Sama_2838 sulfite reductase subunit beta (RefSeq) 0.72 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.94 30
Shewanella sp. ANA-3 0.59 Shewana3_0856 sulfite reductase subunit beta (RefSeq) 0.73 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.93 23
Shewanella oneidensis MR-1 0.59 SO3737 cysI sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) 0.73 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.94 24
Shewanella loihica PV-4 0.58 Shew_0666 sulfite reductase subunit beta (RefSeq) 0.71 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.92 10
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS05900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.51 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.97 5
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_2161 sulfite reductase (NADPH) beta subunit (EC 1.8.1.2) 0.63 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit low > 40
Lysobacter sp. OAE881 0.46 ABIE51_RS15830 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.53 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.94 46
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.1257.1 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.63 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 74
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_05965 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.49 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit low > 52
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS00925 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.54 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Castellaniella sp019104865 MT123 0.45 ABCV34_RS00215 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.62 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit low > 48
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_0019 sir Sulfite reductase, ferredoxin dependent 0.51 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit
Mycobacterium tuberculosis H37Rv 0.10 Rv2391 Ferredoxin-dependent sulfite reductase SirA 0.60 Rv2988c Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI)
Caulobacter crescentus NA1000 0.09 CCNA_01177 sulfite reductase, beta subunit 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit 0.89 37
Caulobacter crescentus NA1000 Δfur 0.09 CCNA_01177 sulfite reductase, beta subunit 0.61 CCNA_00196 3-isopropylmalate dehydratase large subunit low > 67
Azospirillum sp. SherDot2 0.09 MPMX19_00652 Sulfite reductase [ferredoxin] 0.69 MPMX19_01998 3-isopropylmalate dehydratase large subunit 0.87 25
Phaeobacter inhibens DSM 17395 0.08 PGA1_c20760 putative nitrite/sulfite reductase 0.62 PGA1_c29780 3-isopropylmalate dehydratase large subunit
Pseudomonas fluorescens FW300-N1B4 0.08 Pf1N1B4_4656 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.62 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 87
Ralstonia solanacearum UW163 0.08 UW163_RS09070 sulfite reductase 0.62 UW163_RS11105 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum IBSBF1503 0.08 RALBFv3_RS04600 sulfite reductase 0.62 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit low > 76
Dinoroseobacter shibae DFL-12 0.08 Dshi_1153 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein (RefSeq) 0.61 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq)
Azospirillum brasilense Sp245 0.08 AZOBR_RS10125 sulfite reductase 0.67 AZOBR_RS03545 isopropylmalate isomerase 0.91 10
Sphingomonas koreensis DSMZ 15582 0.08 Ga0059261_1498 Sulfite reductase, beta subunit (hemoprotein) 0.59 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit 0.88 30
Rhodospirillum rubrum S1H 0.08 Rru_A1931 Ferredoxin--nitrite reductase (NCBI) 0.67 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI)
Ralstonia sp. UNC404CL21Col 0.08 ABZR87_RS00210 nitrite/sulfite reductase 0.63 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit 0.83 18
Ralstonia solanacearum GMI1000 0.08 RS_RS12170 nitrite/sulfite reductase 0.62 RS_RS10000 3-isopropylmalate dehydratase large subunit 0.44 23
Ralstonia solanacearum PSI07 0.08 RPSI07_RS12775 nitrite/sulfite reductase 0.62 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit low > 81
Herbaspirillum seropedicae SmR1 0.08 HSERO_RS15550 sulfite reductase 0.61 HSERO_RS16515 isopropylmalate isomerase 0.92 2
Paraburkholderia graminis OAS925 0.08 ABIE53_001226 sulfite reductase (NADPH) hemoprotein beta-component 0.62 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit 0.91 9
Dechlorosoma suillum PS 0.08 Dsui_1986 sulfite reductase, beta subunit (hemoprotein) 0.60 Dsui_3201 3-isopropylmalate dehydratase, large subunit
Bosea sp. OAE506 0.07 ABIE41_RS21305 NirA family protein 0.63 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.07 H281DRAFT_00114 sulfite reductase (NADPH) beta subunit 0.62 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit 0.68 9
Sinorhizobium meliloti 1021 0.07 SMc02124 nitrite reductase 0.66 SMc03823 isopropylmalate isomerase large subunit 0.95 7
Burkholderia phytofirmans PsJN 0.07 BPHYT_RS04725 sulfite reductase 0.62 BPHYT_RS33915 isopropylmalate isomerase 0.86 6
Paraburkholderia sabiae LMG 24235 0.07 QEN71_RS25255 nitrite/sulfite reductase 0.62 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.87 35
Pseudomonas putida KT2440 0.06 PP_2371 Sulphite reductase hemoprotein, beta subunit 0.61 PP_1985 3-isopropylmalate dehydratase large subunit 0.79 14
Pseudomonas fluorescens FW300-N2E2 0.06 Pf6N2E2_2073 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 0.62 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.77 28

Not shown: 0 genomes with orthologs for b2763 only; 39 genomes with orthologs for b0072 only