Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BW25113 | 1.0 | b2763 | cysI | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) | 1.0 | b0072 | leuC | isopropylmalate isomerase large subunit (NCBI) | 0.93 | 13 |
Escherichia coli BL21 | 1.00 | ECD_02608 | | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding | 1.00 | ECD_00074 | | 3-isopropylmalate dehydratase large subunit | 0.55 | 6 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_18145 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 1.00 | NIAGMN_08575 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Escherichia coli ECRC62 | 1.00 | BNILDI_10740 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 1.00 | BNILDI_08540 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_10900 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 1.00 | MCAODC_01240 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS15405 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 1.00 | ECOLIN_RS00390 | | 3-isopropylmalate dehydratase large subunit | low | > 52 |
Escherichia coli ECRC99 | 1.00 | KEDOAH_07750 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 1.00 | KEDOAH_17430 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Escherichia coli ECRC101 | 1.00 | OKFHMN_20375 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 1.00 | OKFHMN_10725 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Escherichia coli ECRC98 | 1.00 | JDDGAC_24040 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 1.00 | JDDGAC_14320 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Escherichia coli ECOR27 | 1.00 | NOLOHH_12190 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 1.00 | NOLOHH_03070 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 57 |
Escherichia fergusonii Becca | 1.00 | EFB2_01154 | | Sulfite reductase [NADPH] hemoprotein beta-component | 1.00 | EFB2_03973 | | 3-isopropylmalate dehydratase large subunit | low | > 86 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.99 | OHPLBJKB_00970 | | Sulfite reductase [NADPH] hemoprotein beta-component | 1.00 | OHPLBJKB_03585 | | 3-isopropylmalate dehydratase large subunit | low | > 73 |
Escherichia coli ECOR38 | 0.99 | HEPCGN_19090 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 1.00 | HEPCGN_08705 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 85 |
Enterobacter sp. TBS_079 | 0.96 | MPMX20_03642 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.94 | MPMX20_00767 | | 3-isopropylmalate dehydratase large subunit 1 | 0.65 | 21 |
Enterobacter asburiae PDN3 | 0.95 | EX28DRAFT_2852 | | sulfite reductase (NADPH) hemoprotein, beta-component | 0.95 | EX28DRAFT_3668 | | 3-isopropylmalate dehydratase, large subunit | 0.71 | 39 |
Klebsiella michiganensis M5al | 0.95 | BWI76_RS22760 | | sulfite reductase subunit beta | 0.95 | BWI76_RS04670 | | 3-isopropylmalate dehydratase large subunit | 0.83 | 21 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.95 | GFF4819 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.94 | GFF166 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 78 |
Pantoea sp. MT58 | 0.88 | IAI47_04155 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.87 | IAI47_16010 | | 3-isopropylmalate dehydratase large subunit | 0.92 | 10 |
Serratia liquefaciens MT49 | 0.87 | IAI46_03690 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.86 | IAI46_03345 | | 3-isopropylmalate dehydratase large subunit | low | > 86 |
Erwinia tracheiphila SCR3 | 0.86 | LU632_RS06405 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.79 | LU632_RS02870 | leuC | 3-isopropylmalate dehydratase large subunit | low | > 74 |
Pectobacterium carotovorum WPP14 | 0.85 | HER17_RS04240 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.86 | HER17_RS03075 | | 3-isopropylmalate dehydratase large subunit | 0.91 | 34 |
Dickeya dadantii 3937 | 0.85 | DDA3937_RS16940 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.85 | DDA3937_RS18125 | | 3-isopropylmalate dehydratase large subunit | 0.78 | 61 |
Dickeya dianthicola 67-19 | 0.84 | HGI48_RS17010 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.85 | HGI48_RS18065 | | 3-isopropylmalate dehydratase large subunit | 0.76 | 71 |
Dickeya dianthicola ME23 | 0.84 | DZA65_RS18085 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.85 | DZA65_RS19210 | | 3-isopropylmalate dehydratase large subunit | 0.70 | 32 |
Rahnella sp. WP5 | 0.82 | EX31_RS07900 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.87 | EX31_RS03690 | | 3-isopropylmalate dehydratase large subunit | 0.94 | 22 |
Alteromonas macleodii MIT1002 | 0.74 | MIT1002_03379 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.69 | MIT1002_00947 | | 3-isopropylmalate dehydratase large subunit | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.73 | CSW01_02015 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.80 | CSW01_12605 | | 3-isopropylmalate dehydratase large subunit | low | > 62 |
Shewanella amazonensis SB2B | 0.70 | Sama_2838 | | sulfite reductase subunit beta (RefSeq) | 0.72 | Sama_0337 | | isopropylmalate isomerase large subunit (RefSeq) | 0.94 | 30 |
Shewanella sp. ANA-3 | 0.59 | Shewana3_0856 | | sulfite reductase subunit beta (RefSeq) | 0.73 | Shewana3_3759 | | isopropylmalate isomerase large subunit (RefSeq) | 0.93 | 23 |
Shewanella oneidensis MR-1 | 0.59 | SO3737 | cysI | sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) | 0.73 | SO4234 | leuC | 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) | 0.94 | 24 |
Shewanella loihica PV-4 | 0.58 | Shew_0666 | | sulfite reductase subunit beta (RefSeq) | 0.71 | Shew_3470 | | isopropylmalate isomerase large subunit (RefSeq) | 0.92 | 10 |
Dyella japonica UNC79MFTsu3.2 | 0.49 | ABZR86_RS05900 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.51 | ABZR86_RS15960 | | 3-isopropylmalate dehydratase large subunit | 0.97 | 5 |
Kangiella aquimarina DSM 16071 | 0.49 | B158DRAFT_2161 | | sulfite reductase (NADPH) beta subunit (EC 1.8.1.2) | 0.63 | B158DRAFT_1319 | | 3-isopropylmalate dehydratase, large subunit | low | > 40 |
Lysobacter sp. OAE881 | 0.46 | ABIE51_RS15830 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.53 | ABIE51_RS17575 | | 3-isopropylmalate dehydratase large subunit | 0.94 | 46 |
Xanthomonas campestris pv. campestris strain 8004 | 0.45 | Xcc-8004.1257.1 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.63 | Xcc-8004.1049.1 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 74 |
Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_05965 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.49 | OKGIIK_13585 | leuC | 3-isopropylmalate dehydratase large subunit | low | > 52 |
Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS00925 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.54 | LRK54_RS07375 | | 3-isopropylmalate dehydratase large subunit | low | > 59 |
Castellaniella sp019104865 MT123 | 0.45 | ABCV34_RS00215 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.62 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | low | > 48 |
Synechococcus elongatus PCC 7942 | 0.30 | Synpcc7942_0019 | sir | Sulfite reductase, ferredoxin dependent | 0.51 | Synpcc7942_1898 | leuC | isopropylmalate isomerase large subunit | — | — |
Mycobacterium tuberculosis H37Rv | 0.10 | Rv2391 | | Ferredoxin-dependent sulfite reductase SirA | 0.60 | Rv2988c | | Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | — | — |
Caulobacter crescentus NA1000 | 0.09 | CCNA_01177 | | sulfite reductase, beta subunit | 0.61 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.89 | 37 |
Caulobacter crescentus NA1000 Δfur | 0.09 | CCNA_01177 | | sulfite reductase, beta subunit | 0.61 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | low | > 67 |
Azospirillum sp. SherDot2 | 0.09 | MPMX19_00652 | | Sulfite reductase [ferredoxin] | 0.69 | MPMX19_01998 | | 3-isopropylmalate dehydratase large subunit | 0.87 | 25 |
Phaeobacter inhibens DSM 17395 | 0.08 | PGA1_c20760 | | putative nitrite/sulfite reductase | 0.62 | PGA1_c29780 | | 3-isopropylmalate dehydratase large subunit | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.08 | Pf1N1B4_4656 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.62 | Pf1N1B4_15 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 87 |
Ralstonia solanacearum UW163 | 0.08 | UW163_RS09070 | | sulfite reductase | 0.62 | UW163_RS11105 | | 3-isopropylmalate dehydratase large subunit | — | — |
Ralstonia solanacearum IBSBF1503 | 0.08 | RALBFv3_RS04600 | | sulfite reductase | 0.62 | RALBFv3_RS02620 | | 3-isopropylmalate dehydratase large subunit | low | > 76 |
Dinoroseobacter shibae DFL-12 | 0.08 | Dshi_1153 | | nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein (RefSeq) | 0.61 | Dshi_0085 | | 3-isopropylmalate dehydratase, large subunit (RefSeq) | — | — |
Azospirillum brasilense Sp245 | 0.08 | AZOBR_RS10125 | | sulfite reductase | 0.67 | AZOBR_RS03545 | | isopropylmalate isomerase | 0.91 | 10 |
Sphingomonas koreensis DSMZ 15582 | 0.08 | Ga0059261_1498 | | Sulfite reductase, beta subunit (hemoprotein) | 0.59 | Ga0059261_4223 | | 3-isopropylmalate dehydratase, large subunit | 0.88 | 30 |
Rhodospirillum rubrum S1H | 0.08 | Rru_A1931 | | Ferredoxin--nitrite reductase (NCBI) | 0.67 | Rru_A1189 | | 3-isopropylmalate dehydratase large subunit region (NCBI) | — | — |
Ralstonia sp. UNC404CL21Col | 0.08 | ABZR87_RS00210 | | nitrite/sulfite reductase | 0.63 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | 0.83 | 18 |
Ralstonia solanacearum GMI1000 | 0.08 | RS_RS12170 | | nitrite/sulfite reductase | 0.62 | RS_RS10000 | | 3-isopropylmalate dehydratase large subunit | 0.44 | 23 |
Ralstonia solanacearum PSI07 | 0.08 | RPSI07_RS12775 | | nitrite/sulfite reductase | 0.62 | RPSI07_RS14695 | | 3-isopropylmalate dehydratase large subunit | low | > 81 |
Herbaspirillum seropedicae SmR1 | 0.08 | HSERO_RS15550 | | sulfite reductase | 0.61 | HSERO_RS16515 | | isopropylmalate isomerase | 0.92 | 2 |
Paraburkholderia graminis OAS925 | 0.08 | ABIE53_001226 | | sulfite reductase (NADPH) hemoprotein beta-component | 0.62 | ABIE53_004801 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit | 0.91 | 9 |
Dechlorosoma suillum PS | 0.08 | Dsui_1986 | | sulfite reductase, beta subunit (hemoprotein) | 0.60 | Dsui_3201 | | 3-isopropylmalate dehydratase, large subunit | — | — |
Bosea sp. OAE506 | 0.07 | ABIE41_RS21305 | | NirA family protein | 0.63 | ABIE41_RS11660 | | 3-isopropylmalate dehydratase large subunit | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.07 | H281DRAFT_00114 | | sulfite reductase (NADPH) beta subunit | 0.62 | H281DRAFT_06075 | | 3-isopropylmalate dehydratase, large subunit | 0.68 | 9 |
Sinorhizobium meliloti 1021 | 0.07 | SMc02124 | | nitrite reductase | 0.66 | SMc03823 | | isopropylmalate isomerase large subunit | 0.95 | 7 |
Burkholderia phytofirmans PsJN | 0.07 | BPHYT_RS04725 | | sulfite reductase | 0.62 | BPHYT_RS33915 | | isopropylmalate isomerase | 0.86 | 6 |
Paraburkholderia sabiae LMG 24235 | 0.07 | QEN71_RS25255 | | nitrite/sulfite reductase | 0.62 | QEN71_RS17605 | | 3-isopropylmalate dehydratase large subunit | 0.87 | 35 |
Pseudomonas putida KT2440 | 0.06 | PP_2371 | | Sulphite reductase hemoprotein, beta subunit | 0.61 | PP_1985 | | 3-isopropylmalate dehydratase large subunit | 0.79 | 14 |
Pseudomonas fluorescens FW300-N2E2 | 0.06 | Pf6N2E2_2073 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.62 | Pf6N2E2_63 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.77 | 28 |
Not shown: 0 genomes with orthologs for b2763 only; 39 genomes with orthologs for b0072 only