Homologs of rne from Synechococcus elongatus PCC 7942

rne: ribonuclease, Rne/Rng family
SEED: Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) @ Ribonuclease E (EC 3.1.26.12)
KEGG: ribonuclease E

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Synechococcus elongatus PCC 7942 Synpcc7942_0878 rne ribonuclease, Rne/Rng family strong 100 100
  Bifidobacterium breve UCC2003 BBR_RS19465 ribonuclease E/G strong 35 53
  Castellaniella sp019104865 MT123 ABCV34_RS02480 ribonuclease G insig. 40 49
  Kangiella aquimarina DSM 16071 B158DRAFT_2069 ribonuclease, Rne/Rng family strong 38 46
  Paraburkholderia graminis OAS925 ABIE53_001538 ribonuclease G strong 39 46
  Paraburkholderia sabiae LMG 24235 QEN71_RS24430 ribonuclease G strong 39 46
  Mycobacterium tuberculosis H37Rv Rv2444c Possible ribonuclease E Rne insig. 36 48
  Herbaspirillum seropedicae SmR1 HSERO_RS17790 ribonuclease no data 39 46
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04515 RNAse G sig. 38 46
  Burkholderia phytofirmans PsJN BPHYT_RS06375 ribonuclease strong 38 46
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14980 ribonuclease E/G no data 37 49
  Dechlorosoma suillum PS Dsui_0434 ribonuclease, Rne/Rng family strong 38 46
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14165 Rne/Rng family ribonuclease sig. 36 46
  Acinetobacter radioresistens SK82 MPMX26_00646 Ribonuclease G strong 40 46
  Variovorax sp. OAS795 ABID97_RS16705 ribonuclease G strong 37 46
  Dechlorosoma suillum PS Dsui_2436 ribonuclease, Rne/Rng family strong 36 54
  Enterobacter asburiae PDN3 EX28DRAFT_3297 ribonuclease, Rne/Rng family strong 41 46
  Variovorax sp. SCN45 GFF295 Ribonuclease G cofit 38 46
  Enterobacter sp. TBS_079 MPMX20_04153 Ribonuclease G strong 41 46
  Ralstonia solanacearum GMI1000 RS_RS05150 ribonuclease E no data 36 49
  Phocaeicola dorei CL03T12C01 ABI39_RS21120 Rne/Rng family ribonuclease no data 35 47
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07245 Rne/Rng family ribonuclease strong 35 47
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4531 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) cofit 36 50
  Pantoea sp. MT58 IAI47_12110 ribonuclease E sig. 36 49
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20445 Rne/Rng family ribonuclease no data 35 47
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14370 ribonuclease E/G no data 36 49
  Ralstonia solanacearum PSI07 RPSI07_RS19090 ribonuclease E/G no data 36 49
  Ralstonia solanacearum UW163 UW163_RS11835 ribonuclease E/G no data 36 49
  Cupriavidus basilensis FW507-4G11 RR42_RS04700 ribonuclease G insig. 38 49
  Escherichia coli ECOR38 HEPCGN_23860 rne ribonuclease E strong 37 46
  Escherichia coli Nissle 1917 ECOLIN_RS06270 ribonuclease E cofit 37 46
  Escherichia coli ECOR27 NOLOHH_21150 rne ribonuclease E insig. 36 49
  Escherichia coli ECRC101 MCAODC_22980 rne ribonuclease E insig. 36 49
  Escherichia coli ECRC102 NIAGMN_24210 rne ribonuclease E no data 36 49
  Escherichia coli ECRC98 JDDGAC_07280 rne ribonuclease E no data 36 49
  Escherichia coli ECRC99 KEDOAH_24135 rne ribonuclease E no data 36 49
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3365 Ribonuclease E (EC 3.1.26.12) no data 36 49
  Escherichia coli BL21 ECD_01080 endoribonuclease; RNA-binding protein strong 37 46
  Escherichia fergusonii Becca EFB2_02890 Ribonuclease E insig. 37 46
  Escherichia coli ECRC62 BNILDI_19310 rne ribonuclease E sig. 37 46
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02581 Ribonuclease E insig. 37 46
  Escherichia coli BW25113 b1084 rne fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) strong 37 46
  Serratia liquefaciens MT49 IAI46_22700 ribonuclease G cofit 41 46
  Escherichia coli BL21 ECD_03106 ribonuclease G strong 40 46
  Escherichia fergusonii Becca EFB2_00584 Ribonuclease G insig. 40 46
  Escherichia coli ECOR27 NOLOHH_09530 rng ribonuclease G cofit 40 46
  Escherichia coli ECOR38 HEPCGN_16610 rng ribonuclease G cofit 40 46
  Escherichia coli ECRC101 OKFHMN_17745 rng ribonuclease G insig. 40 46
  Escherichia coli ECRC101 MCAODC_08265 rng ribonuclease G insig. 40 46
  Escherichia coli ECRC102 NIAGMN_15505 rng ribonuclease G insig. 40 46
  Escherichia coli ECRC62 BNILDI_01990 rng ribonuclease G insig. 40 46
  Escherichia coli ECRC98 JDDGAC_21370 rng ribonuclease G no data 40 46
  Escherichia coli ECRC99 KEDOAH_10405 rng ribonuclease G no data 40 46
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00458 Ribonuclease G cofit 40 46
  Escherichia coli Nissle 1917 ECOLIN_RS18605 ribonuclease G insig. 40 46
  Escherichia coli BW25113 b3247 cafA bundles of cytoplasmic filaments (VIMSS) strong 40 46
  Cupriavidus basilensis FW507-4G11 RR42_RS14160 ribonuclease E no data 36 49
  Erwinia tracheiphila SCR3 LU632_RS14860 rne ribonuclease E insig. 36 46
  Escherichia coli ECRC101 OKFHMN_03620 rne ribonuclease E insig. 36 49
  Klebsiella michiganensis M5al BWI76_RS25480 ribonuclease E/G strong 39 46
  Klebsiella michiganensis M5al BWI76_RS11040 ribonuclease E sig. 36 49
  Rahnella sp. WP5 EX31_RS12255 ribonuclease G insig. 40 46
  Pseudomonas stutzeri RCH2 Psest_3323 ribonuclease, Rne/Rng family strong 39 46
  Pseudomonas sp. S08-1 OH686_08595 Ribonuclease G sig. 39 46
  Enterobacter asburiae PDN3 EX28DRAFT_1846 ribonuclease, Rne/Rng family no data 36 49
  Pectobacterium carotovorum WPP14 HER17_RS20150 ribonuclease G sig. 40 46
  Bacteroides stercoris CC31F HMPREF1181_RS04785 Rne/Rng family ribonuclease no data 35 47
  Dickeya dianthicola 67-19 HGI48_RS01370 ribonuclease G cofit 40 46
  Dickeya dianthicola ME23 DZA65_RS01430 ribonuclease G sig. 40 46
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22665 ribonuclease E/G no data 34 47
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) strong 39 46
  Vibrio cholerae E7946 ATCC 55056 CSW01_02205 ribonuclease E/G cofit 38 46
  Pseudomonas syringae pv. syringae B728a Psyr_1638 RNAse E sig. 37 46
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1638 RNAse E insig. 37 46
  Bacteroides ovatus ATCC 8483 BACOVA_04231 S1 RNA binding domain protein no data 35 47
  Pantoea sp. MT58 IAI47_02455 ribonuclease G sig. 40 46
  Shewanella sp. ANA-3 Shewana3_2567 RNAse E (RefSeq) strong 35 49
  Bacteroides thetaiotaomicron VPI-5482 BT1500 Ribonuclease G (NCBI ptt file) no data 35 47
  Dickeya dadantii 3937 DDA3937_RS01450 ribonuclease G strong 40 46
  Pseudomonas simiae WCS417 PS417_21485 ribonuclease E no data 36 46
  Pseudomonas putida KT2440 PP_0937 endoribonuclease G (RNAse G) strong 40 46
  Vibrio cholerae E7946 ATCC 55056 CSW01_10145 ribonuclease E insig. 37 46
  Pseudomonas sp. RS175 PFR28_03019 Ribonuclease E no data 36 46
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5942 Ribonuclease E (EC 3.1.26.12) no data 36 46
  Pseudomonas fluorescens FW300-N2C3 AO356_20120 ribonuclease E no data 36 46
  Dickeya dianthicola 67-19 HGI48_RS13225 ribonuclease E no data 36 49
  Dickeya dianthicola ME23 DZA65_RS13700 ribonuclease E sig. 36 49
  Rahnella sp. WP5 EX31_RS24395 ribonuclease E sig. 36 49
  Ralstonia sp. UNC404CL21Col ABZR87_RS10085 Rne/Rng family ribonuclease strong 35 49
  Pseudomonas fluorescens SBW25 PFLU_RS23100 ribonuclease E cofit 36 46
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23100 ribonuclease E strong 36 46
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2095 Ribonuclease E (EC 3.1.26.12) strong 36 46
  Enterobacter sp. TBS_079 MPMX20_01765 Ribonuclease E strong 35 49
  Lysobacter sp. OAE881 ABIE51_RS06785 ribonuclease G strong 38 48
  Agrobacterium fabrum C58 Atu1339 ribonuclease E strong 38 40
  Pseudomonas fluorescens FW300-N2E3 AO353_01410 ribonuclease E strong 36 46
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_461 Ribonuclease E (EC 3.1.26.12) no data 36 46
  Shewanella loihica PV-4 Shew_1593 ribonuclease (RefSeq) insig. 35 49
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1251 ribonuclease, Rne/Rng family no data 32 46
  Pseudomonas fluorescens SBW25 PFLU_RS04325 ribonuclease G strong 39 46