Homologs of SMc00033 from Sinorhizobium meliloti 1021

hypothetical protein
SEED: Sensory box/GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMc00033 hypothetical protein insig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS04540 EAL domain-containing protein insig. 62 98
o Agrobacterium fabrum C58 Atu0826 hypothetical protein insig. 60 100
o Magnetospirillum magneticum AMB-1 AMB_RS05620 GGDEF domain-containing protein cofit 37 94
o Azospirillum sp. SherDot2 MPMX19_00227 hypothetical protein insig. 39 94
o Rhodospirillum rubrum S1H Rru_A3230 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) insig. 35 95
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3740 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 95
o Pseudomonas syringae pv. syringae B728a Psyr_1598 diguanylate cyclase/phosphodiesterase insig. 33 94
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1598 diguanylate cyclase/phosphodiesterase insig. 33 94
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4208 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5779 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 95
o Pseudomonas fluorescens SBW25 PFLU_RS09975 EAL and GGDEF domain-containing protein insig. 32 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS09975 EAL and GGDEF domain-containing protein insig. 32 94
o Pseudomonas fluorescens FW300-N2E3 AO353_02445 diguanylate phosphodiesterase insig. 32 95
o Pseudomonas simiae WCS417 PS417_09320 diguanylate phosphodiesterase insig. 32 94
o Pseudomonas fluorescens FW300-N2C3 AO356_19330 diguanylate phosphodiesterase insig. 32 95
  Desulfovibrio vulgaris Miyazaki F DvMF_0617 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 32 96
o Pseudomonas sp. RS175 PFR28_03170 hypothetical protein insig. 31 96
  Desulfovibrio vulgaris Hildenborough JW710 DVU1959 EAL domain/GGDEF domain protein (TIGR) insig. 33 93
o Shewanella loihica PV-4 Shew_0436 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 31 92
o Shewanella amazonensis SB2B Sama_3153 putative diguanylate phosphodiesterase (RefSeq) insig. 32 95
o Herbaspirillum seropedicae SmR1 HSERO_RS09540 diguanylate cyclase insig. 30 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02115 diguanylate cyclase/phosphodiesterase insig. 31 95
o Shewanella sp. ANA-3 Shewana3_0554 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 32 90
o Burkholderia phytofirmans PsJN BPHYT_RS02060 diguanylate cyclase insig. 30 95
o Shewanella oneidensis MR-1 SO0555 conserved hypothetical protein (NCBI ptt file) insig. 31 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS00990 phosphodiesterase insig. 31 95
o Dechlorosoma suillum PS Dsui_2890 diguanylate cyclase (GGDEF) domain-containing protein cofit 31 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS35195 phosphodiesterase insig. 30 97
o Cupriavidus basilensis FW507-4G11 RR42_RS35575 diguanylate cyclase insig. 29 90
o Castellaniella sp019104865 MT123 ABCV34_RS04665 GGDEF domain-containing protein insig. 30 93
o Variovorax sp. SCN45 GFF6204 Diguanylate cyclase/phosphodiesterase domain 2 (EAL) insig. 29 94
o Ralstonia sp. UNC404CL21Col ABZR87_RS22805 phosphodiesterase insig. 29 91
  Castellaniella sp019104865 MT123 ABCV34_RS03850 GGDEF domain-containing protein insig. 30 94
o Ralstonia solanacearum PSI07 RPSI07_RS01135 phosphodiesterase insig. 29 89
  Pseudomonas sp. S08-1 OH686_19705 hypothetical protein insig. 31 73
o Rhodanobacter sp. FW510-T8 OKGIIK_13885 eAL phosphodiesterase insig. 28 93
o Acidovorax sp. GW101-3H11 Ac3H11_1101 diguanylate cyclase/phosphodiesterase insig. 27 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS13860 phosphodiesterase insig. 29 95
o Rhodanobacter denitrificans MT42 LRK55_RS13575 GGDEF domain-containing protein insig. 29 95
  Paraburkholderia graminis OAS925 ABIE53_000557 EAL domain-containing protein (putative c-di-GMP-specific phosphodiesterase class I) insig. 29 68
  Dechlorosoma suillum PS Dsui_2301 diguanylate cyclase (GGDEF) domain-containing protein cofit 28 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_07985 EAL domain-containing protein cofit 36 38
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08280 EAL domain-containing protein insig. 37 40
  Alteromonas macleodii MIT1002 MIT1002_00062 Bacteriophytochrome cph2 insig. 34 37
  Vibrio cholerae E7946 ATCC 55056 CSW01_08600 hypothetical protein insig. 29 63
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 34 37
  Dechlorosoma suillum PS Dsui_1890 diguanylate cyclase (GGDEF) domain-containing protein insig. 33 37
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 37
  Kangiella aquimarina DSM 16071 B158DRAFT_0054 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 32 39
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 33 36
  Rhizobium sp. OAE497 ABIE40_RS13070 EAL domain-containing protein insig. 33 41
  Lysobacter sp. OAE881 ABIE51_RS14975 EAL domain-containing protein insig. 36 37
  Klebsiella michiganensis M5al BWI76_RS18710 GGDEF-domain containing protein strong 34 40
  Azospirillum sp. SherDot2 MPMX19_02421 putative signaling protein insig. 36 37
  Kangiella aquimarina DSM 16071 B158DRAFT_0509 diguanylate cyclase (GGDEF) domain strong 34 36
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 37
  Synechococcus elongatus PCC 7942 Synpcc7942_2519 diguanylate cyclase/phosphodiesterase insig. 33 37
  Shewanella sp. ANA-3 Shewana3_2929 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 34 37
  Acidovorax sp. GW101-3H11 Ac3H11_2218 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 33 36
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1770.1 hypothetical protein insig. 37 37
  Herbaspirillum seropedicae SmR1 HSERO_RS13550 diguanylate phosphodiesterase insig. 34 37
  Pseudomonas putida KT2440 PP_1718 putative diguanylate phosphodiesterase containing EAL domain insig. 32 43
  Azospirillum sp. SherDot2 MPMX19_04558 hypothetical protein insig. 36 37
  Pseudomonas syringae pv. syringae B728a Psyr_3843 diguanylate cyclase/phosphodiesterase insig. 33 36
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3843 diguanylate cyclase/phosphodiesterase insig. 33 36
  Marinobacter adhaerens HP15 HP15_845 sensory box/GGDEF family protein insig. 31 41
  Rahnella sp. WP5 EX31_RS07415 bifunctional diguanylate cyclase/phosphodiesterase insig. 30 41
  Azospirillum brasilense Sp245 AZOBR_RS03645 signal peptide protein insig. 35 37
  Marinobacter adhaerens HP15 HP15_3533 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 34 36
  Rhizobium sp. OAE497 ABIE40_RS05245 EAL domain-containing protein insig. 33 41
  Shewanella oneidensis MR-1 SO2539 response regulator (NCBI ptt file) insig. 30 40
  Paraburkholderia sabiae LMG 24235 QEN71_RS08805 EAL domain-containing protein insig. 33 40
  Pseudomonas fluorescens SBW25 PFLU_RS20590 EAL domain-containing protein insig. 36 36
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20590 EAL domain-containing protein insig. 36 36
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2284.1 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 37
  Cupriavidus basilensis FW507-4G11 RR42_RS00130 diguanylate cyclase insig. 32 41
  Agrobacterium fabrum C58 Atu2228 GGDEF family protein insig. 32 42
  Pseudomonas fluorescens FW300-N2E3 AO353_17145 diguanylate phosphodiesterase insig. 31 37
  Herbaspirillum seropedicae SmR1 HSERO_RS08510 phosphodiesterase insig. 37 38
  Pseudomonas simiae WCS417 PS417_18610 histidine kinase sig. 36 36
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03158 diguanylate cyclase/phosphodiesterase no data 34 40
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 30 37
  Rhodospirillum rubrum S1H Rru_A1544 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 35 41
  Desulfovibrio vulgaris Hildenborough JW710 DVU0457 EAL domain protein (TIGR) strong 35 40
  Shewanella oneidensis MR-1 SO1500 sensory box protein (NCBI ptt file) strong 34 37
  Desulfovibrio vulgaris Miyazaki F DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 33 36
  Sinorhizobium meliloti 1021 SMc00887 hypothetical protein insig. 33 40
  Pseudomonas putida KT2440 PP_3319 Sensory box protein/GGDEF domain protein insig. 32 37
  Acidovorax sp. GW101-3H11 Ac3H11_2715 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 34 38
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 33 37
  Burkholderia phytofirmans PsJN BPHYT_RS27880 diguanylate phosphodiesterase insig. 31 36
  Pseudomonas syringae pv. syringae B728a Psyr_3942 diguanylate cyclase/phosphodiesterase insig. 34 37
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3942 diguanylate cyclase/phosphodiesterase insig. 34 37
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4602 Sensory box/GGDEF family protein insig. 32 37
  Alteromonas macleodii MIT1002 MIT1002_01871 Bacteriophytochrome cph2 cofit 31 36
  Burkholderia phytofirmans PsJN BPHYT_RS28520 hypothetical protein insig. 34 36
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 31 41
  Paraburkholderia sabiae LMG 24235 QEN71_RS10745 EAL domain-containing protein insig. 34 36
  Pseudomonas simiae WCS417 PS417_06630 diguanylate phosphodiesterase insig. 31 41